Detailed infomation of each circRNA
General Information | |
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CircRNA Name | Zm00001d018859_circ_g.7 |
ID in PlantcircBase | zma_circ_002450 |
Alias | circ1145 |
Organism | Zea mays |
Position | chr7: 7547174-7547255 JBrowse» |
Reference genome | AGPv4.38 |
Type | ui-circRNA |
Identification method | CIRI |
Parent gene | Zm00001d018859 |
Parent gene annotation |
Ubiquitin carboxyl-terminal hydrolase 13 |
Parent gene strand | - |
Alternative splicing | Zm00001d018859_circ_g.1 Zm00001d018859_circ_g.2 Zm00001d018859_circ_g.3 Zm00001d018859_circ_g.4 Zm00001d018859_circ_g.5 Zm00001d018859_circ_g.6 |
Support reads | 18 |
Tissues | seedling leaves |
Exon boundary | No-Yes |
Splicing signals | CT-CA |
Number of exons covered | Zm00001d018859_T010:1 Zm00001d018859_T008:1 Zm00001d018859_T003:1 Zm00001d018859_T032:1 Zm00001d018859_T002:1 Zm00001d018859_T038:1 Zm00001d018859_T023:1 Zm00001d018859_T017:1 Zm00001d018859_T041:1 Zm00001d018859_T013:1 Zm00001d018859_T030:1 Zm00001d018859_T011:1 Zm00001d018859_T015:1 Zm00001d018859_T004:1 Zm00001d018859_T031:1 Zm00001d018859_T028:1 Zm00001d018859_T026:1 Zm00001d018859_T001:1 Zm00001d018859_T005:1 Zm00001d018859_T042:1 Zm00001d018859_T033:1 Zm00001d018859_T020:1 Zm00001d018859_T018:1 Zm00001d018859_T022:1 |
Conservation Information | |
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Conserved circRNAs | NA |
PMCS | 0.540650407 |
Functional Information | |
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Coding potential | N |
Potential coding position |
NA |
Potential amino acid sequence |
NA |
Sponge-miRNAs | NA |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | NA |
Other Information | |
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References | Chen et al., 2017b |