Detailed infomation of each circRNA
General Information | |
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CircRNA Name | Zm00001d018859_circ_g.5 |
ID in PlantcircBase | zma_circ_002449 |
Alias | circ1552 |
Organism | Zea mays |
Position | chr7: 7546981-7547255 JBrowse» |
Reference genome | AGPv4.38 |
Type | ui-circRNA |
Identification method | CIRCexplor2 |
Parent gene | Zm00001d018859 |
Parent gene annotation |
Ubiquitin carboxyl-terminal hydrolase 13 |
Parent gene strand | - |
Alternative splicing | Zm00001d018859_circ_g.1 Zm00001d018859_circ_g.2 Zm00001d018859_circ_g.3 Zm00001d018859_circ_g.4 Zm00001d018859_circ_g.6 Zm00001d018859_circ_g.7 |
Support reads | 2 |
Tissues | seedling leaves |
Exon boundary | No-Yes |
Splicing signals | CT-TA |
Number of exons covered | Zm00001d018859_T041:2 Zm00001d018859_T023:2 Zm00001d018859_T004:2 Zm00001d018859_T027:1 Zm00001d018859_T032:2 Zm00001d018859_T005:2 Zm00001d018859_T002:2 Zm00001d018859_T038:2 Zm00001d018859_T011:2 Zm00001d018859_T013:2 Zm00001d018859_T018:2 Zm00001d018859_T010:2 Zm00001d018859_T031:2 Zm00001d018859_T026:2 Zm00001d018859_T022:2 Zm00001d018859_T028:2 Zm00001d018859_T033:2 Zm00001d018859_T020:2 Zm00001d018859_T003:2 Zm00001d018859_T001:2 Zm00001d018859_T017:2 Zm00001d018859_T042:2 Zm00001d018859_T008:2 Zm00001d018859_T030:2 Zm00001d018859_T015:2 |
Conservation Information | |
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Conserved circRNAs | NA |
PMCS | 0.168194667 |
Functional Information | |
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Coding potential | N |
Potential coding position |
NA |
Potential amino acid sequence |
NA |
Sponge-miRNAs | NA |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | NA |
Other Information | |
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References | Chen et al., 2017b |