Splice junction sequence |
GATGCGTAAGATAATGGTCCGGATGGTTAACTAGAAAGAAATGTTCCACACTGTCACTAATGGA CTCATCTGGGTCCGCTGGTACGTTCCTAACCAAAACttctcgatgatggatttcaggaaaggag catttttctcaatgccttcgatgcttgcaagggattgaacaaaggctattggaatcatgaagaa gaaagtga
|
Assembled circRNA sequence |
Yes
The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).
|
Full-length trsnacripts |
Transcript length: 644 Transcript exons: 4041407-4041747,4041827-4041907,4041991-4042110,4042193- 4042294 TTCTCGATGATGGATTTCAGGAAAGGAGCATTTTTCTCAATGCCTTCGATGCTTGCAAGGGATT GAACAAAGGCTATTGGAATCATGAAGAAGAAAGTGAGGAAGAAGAATGCAATGTGCATTATAAG TCTTCTTACTGTTAAAGAGACATAAGGTATTGCAAGGTTCGACCAAAACACTTCTCGTGCCTCG GGAGCCCATTCAGTTAACCATTCAGTCGGATCACTCGACTGTTGAGTCTGTGCACTAACCGCAG CACCCCACCGTGTTTTAAACGAGACAAAAGCGGCTGGCATTACACTTGTATCATCTTTCTTCAC TTTTTTCCTCTCCTCCATTATTTGCTCGTTTAATTTCTCGATTTCAGCTATATAATGATCGATT GCGTCAACTTTCTTTCCCCATAGCCCGAGAAAACCCGTCTTTATCCTCGGCTTATGTTCCTGGT TCCTTGTATACTTCAATTGGTAATAGTCAAGCCAGTTCTGTGTGCTCTTCTTCTGCTCTACTAA TGCTGCCAAATCGTTTGCATTGTACACAACCTGATGCGTAAGATAATGGTCCGGATGGTTAACT AGAAAGAAATGTTCCACACTGTCACTAATGGACTCATCTGGGTCCGCTGGTACGTTCCTAACCA AAAC
|
Genomic sequence |
TTCTCGATGATGGATTTCAGGAAAGGAGCATTTTTCTCAATGCCTTCGATGCTTGCAAGGGATT GAACAAAGGCTATTGGAATCATGAAGAAGAAAGTGAGGAAGAAGAATGCAATGTGCATTATAAG TCTTCTTACTGTTAAAGAGACATAAGGTATTGCAAGGTTCGACCAAAACACTTCTCGTGCCTCG GGAGCCCATTCAGTTAACCATTCAGTCGGATCACTCGACTGTTGAGTCTGTGCACTAACCGCAG CACCCCACCGTGTTTTAAACGAGACAAAAGCGGCTGGCATTACACTTGTATCATCTTTCTTCAC TTTTTTCCTCTCCTCCATTATCTAATCAAGAAACCGAAAAGATAAGTCAAGTTTGATTATTTCC AACTGAGAAACCGTTGTAGGAAGAAATGATACTTACTTGCTCGTTTAATTTCTCGATTTCAGCT ATATAATGATCGATTGCGTCAACTTTCTTTCCCCATAGCCCGAGAAAACCCGTCTAGTTTCCCA AAGAACACAACATGAAACAGATTAGATACAAGACAAGCTTCTTTAAGTTTGTGTCTAAGACCAC TCAGTTACCTTTATCCTCGGCTTATGTTCCTGGTTCCTTGTATACTTCAATTGGTAATAGTCAA GCCAGTTCTGTGTGCTCTTCTTCTGCTCTACTAATGCTGCCAAATCGTTTGCATTGTACACAAC CTGGGTATAATCAACTTCCATAATTTAAACAAAACCCGAGGAAAAAGACTGATTCTTTCTAAGC AATGAATGAGCTTATAACCTGATGCGTAAGATAATGGTCCGGATGGTTAACTAGAAAGAAATGT TCCACACTGTCACTAATGGACTCATCTGGGTCCGCTGGTACGTTCCTAACCAAAAC |