Detailed infomation of each circRNA
General Information | |
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CircRNA Name | BGIOSGA008183_circ_g.1 |
ID in PlantcircBase | osi_circ_011681 |
Alias | Chr02:16425513_16428994(MH63RS2) |
Organism | Oryza sativa ssp. indica |
Position | chr2: 17050062-17053537 JBrowse» |
Reference genome | Oryza_indica.ASM465v1.42 |
Type | ei-circRNA |
Identification method | CIRCexplorer2 |
Parent gene | BGIOSGA008183 |
Parent gene annotation | NA |
Parent gene strand | + |
Alternative splicing | BGIOSGA008183_circ_g.2 BGIOSGA008183_circ_g.3 BGIOSGA008183_circ_g.4 BGIOSGA008183_circ_g.5 |
Support reads | NA |
Tissues | root, leaf, panicle |
Exon boundary | No-Yes |
Splicing signals | GT-CA |
Number of exons covered | BGIOSGA008183-TA:6 |
Conservation Information | |
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Conserved circRNAs | osa_circ_014625 osa_circ_020501 |
PMCS |
Functional Information | |
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Coding potential | N |
Potential coding position |
NA |
Potential amino acid sequence |
NA |
Sponge-miRNAs | NA |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | NA |
Other Information | |
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References | Zhou et al., 2021 |