Plant Circular RNA Database

Detail information of BGIOSGA008183_circ_g.5

			
						 General Information
					
						CircRNA Name
						BGIOSGA008183_circ_g.5
					
						ID in PlantcircBase
						osi_circ_003907
					
						Alias
						2:17053362|17058144
					
						Organism
						
							Oryza sativa ssp. indica						
					
						Position
						
							chr2: 17053362-17058144  JBrowse»						
					
						Reference genome
						
							Oryza_indica.ASM465v1.42						
					
						Type  
						
							e-circRNA							
									
						Identification method
						find_circ
					
						Parent gene
						
							BGIOSGA008183						
					
						Parent gene annotation
						
							NA							
					
						Parent gene strand
						+
					
						Alternative splicing
						
							BGIOSGA008183_circ_g.1 BGIOSGA008183_circ_g.2 BGIOSGA008183_circ_g.3 BGIOSGA008183_circ_g.4 						
					
						Support reads
						NA
					
						Tissues
						leaf
					
						Exon boundary  
						
							Yes-Yes							"Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.

						Splicing signals  
						
							GT-AG							The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.

						Number of exons covered
						BGIOSGA008183-TA:6

General Information
CircRNA Name	BGIOSGA008183_circ_g.5
ID in PlantcircBase	osi_circ_003907
Alias	2:17053362\|17058144
Organism	Oryza sativa ssp. indica
Position	chr2: 17053362-17058144 JBrowse»
Reference genome	Oryza_indica.ASM465v1.42
Type	e-circRNA
Identification method	find_circ
Parent gene	BGIOSGA008183
Parent gene annotation	NA
Parent gene strand	+
Alternative splicing	BGIOSGA008183_circ_g.1 BGIOSGA008183_circ_g.2 BGIOSGA008183_circ_g.3 BGIOSGA008183_circ_g.4
Support reads	NA
Tissues	leaf
Exon boundary	Yes-Yes "Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.
Splicing signals	GT-AG The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.
Number of exons covered	BGIOSGA008183-TA:6

			
						 Experimental Information
					
						Sanger sequencing for BSS  
						
							NA							Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".

						PCR primers for BSS   
						
							NA							PCR primers used in back-splicing site (BSS) validation.

						Sanger sequencing for FL   
						
							NA							Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.

						PCR primers for FL   
						
							NA							 PCR primers used in full-length (FL) sequence validation.

Experimental Information
Sanger sequencing for BSS	NA Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".
PCR primers for BSS	NA PCR primers used in back-splicing site (BSS) validation.
Sanger sequencing for FL	NA Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.
PCR primers for FL	NA PCR primers used in full-length (FL) sequence validation.

			
				
						 Sequences
					

				
						Splice junction sequence  
						
							ACTTATGTTTGGTTTGTATTTAGGTTTCTGCTATGTCCAAAGGATTACGATATGGTGATGCTGT
AAAGCTTACTTCAATGCTCGAGGAGGCTTCTCATGGgttgtcattatcagaggatcctgccttg
atgatggcattttcaatagcacgtcgtgcagctgcagtcccacttctgttggttaatggtacct
ataagtca

									
								

					

						Assembled circRNA sequence  
						
							NA
The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).

					

						Full-length trsnacripts
						
							NA						
					

						Genomic sequence
						
							GTTGTCATTATCAGAGGATCCTGCCTTGATGATGGCATTTTCAATAGCACGTCGTGCAGCTGCA
GTCCCACTTCTGTTGGTTAATGGTACCTATAAGTCAACTGTCCATACATATCTTGATTCTGCCA
TTCTCCAACATCAGCTACAGAGGTTAAGCGAGCACAACTCGCTCAAAGGTATGCACATTTTAGT
CGCCTGGGAGAGGCTCAATTAGCGAGTCATCTTAGTTGCCTGGGAGATTTGGAAACATAGAAAT
GATTGTGTTTTCCATGGAGCTACCCCTAGTGTGTCTGTGGTAAATCCAAGCTGTAGTTAACGAG
GGTGCACTTTGGTGCTGGGCAGGAGATTCAAAGCTCCAAGAGCTGTTTGCTAAAGCAATAGCTC
CTGTACCTTAAGCATGTGTTTGGTTTGGGGACTAAGTGGGATGGGTTAGACCTATCCTAGTTTT
TTTGGGATGGGATGGTTCCAGTTGTTTGTTTTGTTTATGGTATGGGATGGTTCTAGTATTTTGT
TTGGTAGAAGGGATTGAGGTGGGATGGGATGGACAACTTTGCATTGACCGTTAGTGCCGTCTGG
CTCCCAGCGGCTGGGGTGCAGTGAGCGGCGAGCGTGGGGGCGGAGGAGCTCATCGCCGCGAGTG
GCACACAGGCAAAAGAGTGGTGGCTAGAGGCAAGGGAGTCGACGGCGTTCATGGAGGTGGCGGC
CTGTCACAGCGGAGGAGAGGCCGCGGTGTCTTGGAGAAGCGCTGGCGCTCACGGAGTTGGCGAC
TGGCGCAGACGAGCGCCAGCGGATGAAGAGGCGAGCTGATGTCGTGTGCTTCGTCCAGGTTGGA
CGAGCTCGTCCGGCCGATTTTGCTTGATGGCTTGGTCCCGGATCTGAGAGGAATATTCCTCTCC
AGGGAGTCCCTAAACCAACCCAACTCACTCATCCCTAAACCAAACACTCCTAAAAATGGCACCA
TCCCATCCCATCCTTGCAACCAAACACATCCTAGGAAGTCGAAGTTCGTGTTTGGTGTTGTGTG
TGCGTGCGTACATGTGTGTGTGTGTGTGTTTTTTGTGTTTTGTAAGACCTTGGTGGGTGGGTGC
TGGGGTTGGCTAATTCCTTCACCTCTCGCCTCTTTTTTTTTCCTGCTTAATTAAACGATACGCA
AATCTCATTCGTATTCGTAAAAAAAGGTGTACACATTTTCTTTGCTTTTCATGATATAGGAACA
GAAGACATCAAGTTCTGCATAGTAGAAGATGCTAAATCATATGACATTACAATTTATGGACCAA
TGAACATAAAATGCTAAATATTTTGTATTGAACATAATTTTAATGCTATAAAAATTCCAATAAG
AATCATGATTTTTGTACACTCAACTTTATACAGACTGGCAAAAATCTGATATCAGATTTATCCT
ATTTGTCAGGATCTATACAACACAAATTGTGCATCTATTCCATGATGAATAGTTTTGATTGTTT
TTTTTTATTGAGAATGGAAATTTGATGGTTTGTACCTTCATATGTACTATGATCATGATTTGTT
TTTGAACGTTCGAATCACTTAAAACGTGGTGAATTTGACTGAAGACACAGGTACCCTAGGACAG
AAAAACTGCATTCTTTATGAGCAACTAGTGACATGCCCGTGCCTTCAACGGGATGTTAAGGAAC
AAGGACGAATGCCTGTGCTTAGCAACGGGATGATGGTTTTACGGGGTTAAGTTTTTCCTATCCA
GTTCTTTTAGTTGGTCGTAAAAACACAGGATTTTGGTGGGGTGGTTTTTTGAGGTAGGGTGGTT
TTCTTACGTGGAGGAAGAGGTGGTTTTTGGGTGGAGTGTTTTTTTGAGGCAGGGTGGTCTTTTT
ACATGGGGGGAGCCAGAGAGGACAACTCTTTTTTTACAGTAGAGAGATTATGAACAAAAAATAT
GTGCAAGGAGGCCAAGATTTTACAGTAGAGGGTTGAATGATATTGATCGAGGCTAAAATGGCAG
TGGGGAAGTTCATGGGTCATGGCTGAGCTGTTTAATCTATTATTGCTAAATATTACCTATATTG
TGTATTTGTTATTTGTTGATATCAGTAGGCCTGCAAACACAAACCTTTGACAGCTACTTTCTAG
TGCAAAAGTGTTAACAATATAATCAGTTGAAATTTGATGGCATGTTACTAATGCCATTTCTGTG
TGACAGTATAACATTACATTTACTTAGGTACGTTAGTGGTTAATATCGTGAGCAAGTTTGTAAG
CTAGATTTCTCTTCTATATGCAGGAGGACACTCAAATCACAGGTCAACATTGGAGATTCCAATA
TTCTGGTTCATACATAGTGAACCCCTATTATTGGATAAACATTATCAAGCCAAATCTCTTTCAA
ACATGGTTGTAGTAGTTCAATCAGAAGTTGATTCTTGGGAAAGCCACTTGCAGTGCAATGGGAG
GTCAATCTTATGGGATTTGAGGTAGGATTGCCATATCATACACATGATTTATTTGGTTTCCAGT
TGGTTACCTTCGCAATCTATTATACAGTCTTGTCTTTCATGTACCAAATTGTAACCATTCTTGA
TTTTAGAAAAAAAGAAACACTGGGCTCGATCACAGGCCAACTTTAAATTGAAATTTAATGTTTT
GAAAATTTATGTTCATCCGTTTGAAAATGGACCAGAATCTGACATGTTCAACTGAAGCGGTGAC
CATATTTAGGGTTCATTCAGTTTATGCACACATGTGGACCCCTCATAGTTAGTTGCGATAACCT
GACTTTGGCCCAGTCCTTTTCAAATTTACTGGATTGTTGAAACAGATTATTGACTCTACTCTTC
GAAAAATACATTTTCTCAGAAAACTTTCTTCTACTATATTGCTTAGACCACTTATTTTAAGTTC
CTTTTTAAGTTTATTTATCAAAATATTTTATTTATCTCTATAATCAAGTAGATAATCTGCAGCA
ACAATCTGCTCAATAATCTGATTCAAACTGAGCCTTGAGCATTGTCGAGCAGTGAGAATAAGGC
TACATAATTTAATGAACACAAGTTAAGAAAAAAATGGTGGCTAGACCAGTTTAACTTGGGCATT
CCAAACCTGAAGAAGAGAACGCTTAGACCACTTGTTTGGTACTTTGTTTCATTAGCATCGGTCA
ACCTTTTGACATCAACACCACACCAGTTTAATCACAAGATTGTACAGAGCCAACTTGCTGCAGA
ATGTGGCCATGCCAATATTTGGGCTTTGGCAGGTCTTAATATCCATCCTCAAAAACTACCTTTT
TTCCTCCTGATTTTGAGTTTGATTGAACTGCATTAATGCTATTAATAAACTGACTTGCAGGAGA
CCAGTAAAAGCTGCCATTGCTGCAACTGCCGAGTATGTATCTGGTTTACTTCCTTCACATCTGG
CTTATAGCCCAGCTCATGAAACTGCAACAGAGGTTTGTCATACGACTATACCTATTAGTCTTCC
TATTTGTTAACTGATGGGCAGGATATGTTTCTTTTCTGGAACCAGATAAAATTATCAATATTTT
TACATTTTTTCATTTGCCCTTCGCAACAGAAAGCATGCAGTCAAATTTCTATATTTTTTTTACC
AGTATATATGAAAGACTTTAACACTTATCATGTGGTATACTTAGATATGCTGTACTGTAGATTT
TCTTCAACATGTTCATATAAAACTTAGTGATCAAAGTTATATTTTGGAGATTCTGCCGATGTAC
AGAAAACTGCAGTCTTAAACAGATTGAGTGATAGTTTAGTCTGCTACTCATTACATTTTCTGTT
TTCTAATAATTCTAGGACTGGACTTGGTCTGTGGGCTGTAATCCCTTATCTATTACTTCAAAAG
GCTGGCAACTTTCGGAGTTTCAACGTGATGTTATTGCTCGTAACTACATCATTACTGCAGTGGA
GGAATCTATACAAATCATCAATTCAGCAATTCAACAATTGATTACAGAAAGGACAAGTATCCTA
ATAATTTTGCTTTTTTTAATCTAATACGCTCGAGAGCTGCATATCATTTCATTAAAGAAGAGAA
CCGTATGAGTCTGGAAACCTTACAAAAAAATAGCAACAAACAATTGCACCACGGACTATTTTGC
TGGACAAAACTAAGAACAAAATTTTGCTGTTTCATTATTCAAATTCCGGACAATTTAATGTTTG
TTGGGAATCATGTTGTTTTTTTTGAAAAAGATAACAGAGATGGATCAACTTTATGTATGTGTCA
TGTTTCCATGTGAACTAGCTGAATCTTTGAAGAGCATGACTTTTACACTAGTTGATTTTTACAT
TCCAAAATTTTTACTATGTAAAGACATCAGCTAGTTTCTCTGCAGTGAGATAATTAAAATGACC
CCTATGTCGATAGTCCTCCGACTGGTATTTATAGTGTAGGTTGTGGGTTGAACCTCAACCAAGA
ACAGGTTAATGTCTTCTGTAAAAAGTTGGGTTTTACCATTAAGTAGATGAAAGCCACAAGCCTA
TTAGTTCATTTGTATTGCTTGCTCTCAAAACTTTTCTTGAAGGGCCTTAACAATATTTAGGTGA
ACGAGGCTTTAAACTTTTCAAGGCTCAGGAGAGAGTGCTGGTTGAAAAGTATAATTCTGTTGTT
AGCTTGTGGAGAAGGGTAAGTCGCTTCTTGATGTGCCTTTTTTTTTTCCTTTGTTTTACATAAA
AATATTATGGCACTTATGTTTGGTTTGTATTTAGGTTTCTGCTATGTCCAAAGGATTACGATAT
GGTGATGCTGTAAAGCTTACTTCAATGCTCGAGGAGGCTTCTCATGG
						
					

			
		

Sequences
Splice junction sequence	ACTTATGTTTGGTTTGTATTTAGGTTTCTGCTATGTCCAAAGGATTACGATATGGTGATGCTGT AAAGCTTACTTCAATGCTCGAGGAGGCTTCTCATGGgttgtcattatcagaggatcctgccttg atgatggcattttcaatagcacgtcgtgcagctgcagtcccacttctgttggttaatggtacct ataagtca
Assembled circRNA sequence	NA The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).
Full-length trsnacripts	NA
Genomic sequence	GTTGTCATTATCAGAGGATCCTGCCTTGATGATGGCATTTTCAATAGCACGTCGTGCAGCTGCA GTCCCACTTCTGTTGGTTAATGGTACCTATAAGTCAACTGTCCATACATATCTTGATTCTGCCA TTCTCCAACATCAGCTACAGAGGTTAAGCGAGCACAACTCGCTCAAAGGTATGCACATTTTAGT CGCCTGGGAGAGGCTCAATTAGCGAGTCATCTTAGTTGCCTGGGAGATTTGGAAACATAGAAAT GATTGTGTTTTCCATGGAGCTACCCCTAGTGTGTCTGTGGTAAATCCAAGCTGTAGTTAACGAG GGTGCACTTTGGTGCTGGGCAGGAGATTCAAAGCTCCAAGAGCTGTTTGCTAAAGCAATAGCTC CTGTACCTTAAGCATGTGTTTGGTTTGGGGACTAAGTGGGATGGGTTAGACCTATCCTAGTTTT TTTGGGATGGGATGGTTCCAGTTGTTTGTTTTGTTTATGGTATGGGATGGTTCTAGTATTTTGT TTGGTAGAAGGGATTGAGGTGGGATGGGATGGACAACTTTGCATTGACCGTTAGTGCCGTCTGG CTCCCAGCGGCTGGGGTGCAGTGAGCGGCGAGCGTGGGGGCGGAGGAGCTCATCGCCGCGAGTG GCACACAGGCAAAAGAGTGGTGGCTAGAGGCAAGGGAGTCGACGGCGTTCATGGAGGTGGCGGC CTGTCACAGCGGAGGAGAGGCCGCGGTGTCTTGGAGAAGCGCTGGCGCTCACGGAGTTGGCGAC TGGCGCAGACGAGCGCCAGCGGATGAAGAGGCGAGCTGATGTCGTGTGCTTCGTCCAGGTTGGA CGAGCTCGTCCGGCCGATTTTGCTTGATGGCTTGGTCCCGGATCTGAGAGGAATATTCCTCTCC AGGGAGTCCCTAAACCAACCCAACTCACTCATCCCTAAACCAAACACTCCTAAAAATGGCACCA TCCCATCCCATCCTTGCAACCAAACACATCCTAGGAAGTCGAAGTTCGTGTTTGGTGTTGTGTG TGCGTGCGTACATGTGTGTGTGTGTGTGTTTTTTGTGTTTTGTAAGACCTTGGTGGGTGGGTGC TGGGGTTGGCTAATTCCTTCACCTCTCGCCTCTTTTTTTTTCCTGCTTAATTAAACGATACGCA AATCTCATTCGTATTCGTAAAAAAAGGTGTACACATTTTCTTTGCTTTTCATGATATAGGAACA GAAGACATCAAGTTCTGCATAGTAGAAGATGCTAAATCATATGACATTACAATTTATGGACCAA TGAACATAAAATGCTAAATATTTTGTATTGAACATAATTTTAATGCTATAAAAATTCCAATAAG AATCATGATTTTTGTACACTCAACTTTATACAGACTGGCAAAAATCTGATATCAGATTTATCCT ATTTGTCAGGATCTATACAACACAAATTGTGCATCTATTCCATGATGAATAGTTTTGATTGTTT TTTTTTATTGAGAATGGAAATTTGATGGTTTGTACCTTCATATGTACTATGATCATGATTTGTT TTTGAACGTTCGAATCACTTAAAACGTGGTGAATTTGACTGAAGACACAGGTACCCTAGGACAG AAAAACTGCATTCTTTATGAGCAACTAGTGACATGCCCGTGCCTTCAACGGGATGTTAAGGAAC AAGGACGAATGCCTGTGCTTAGCAACGGGATGATGGTTTTACGGGGTTAAGTTTTTCCTATCCA GTTCTTTTAGTTGGTCGTAAAAACACAGGATTTTGGTGGGGTGGTTTTTTGAGGTAGGGTGGTT TTCTTACGTGGAGGAAGAGGTGGTTTTTGGGTGGAGTGTTTTTTTGAGGCAGGGTGGTCTTTTT ACATGGGGGGAGCCAGAGAGGACAACTCTTTTTTTACAGTAGAGAGATTATGAACAAAAAATAT GTGCAAGGAGGCCAAGATTTTACAGTAGAGGGTTGAATGATATTGATCGAGGCTAAAATGGCAG TGGGGAAGTTCATGGGTCATGGCTGAGCTGTTTAATCTATTATTGCTAAATATTACCTATATTG TGTATTTGTTATTTGTTGATATCAGTAGGCCTGCAAACACAAACCTTTGACAGCTACTTTCTAG TGCAAAAGTGTTAACAATATAATCAGTTGAAATTTGATGGCATGTTACTAATGCCATTTCTGTG TGACAGTATAACATTACATTTACTTAGGTACGTTAGTGGTTAATATCGTGAGCAAGTTTGTAAG CTAGATTTCTCTTCTATATGCAGGAGGACACTCAAATCACAGGTCAACATTGGAGATTCCAATA TTCTGGTTCATACATAGTGAACCCCTATTATTGGATAAACATTATCAAGCCAAATCTCTTTCAA ACATGGTTGTAGTAGTTCAATCAGAAGTTGATTCTTGGGAAAGCCACTTGCAGTGCAATGGGAG GTCAATCTTATGGGATTTGAGGTAGGATTGCCATATCATACACATGATTTATTTGGTTTCCAGT TGGTTACCTTCGCAATCTATTATACAGTCTTGTCTTTCATGTACCAAATTGTAACCATTCTTGA TTTTAGAAAAAAAGAAACACTGGGCTCGATCACAGGCCAACTTTAAATTGAAATTTAATGTTTT GAAAATTTATGTTCATCCGTTTGAAAATGGACCAGAATCTGACATGTTCAACTGAAGCGGTGAC CATATTTAGGGTTCATTCAGTTTATGCACACATGTGGACCCCTCATAGTTAGTTGCGATAACCT GACTTTGGCCCAGTCCTTTTCAAATTTACTGGATTGTTGAAACAGATTATTGACTCTACTCTTC GAAAAATACATTTTCTCAGAAAACTTTCTTCTACTATATTGCTTAGACCACTTATTTTAAGTTC CTTTTTAAGTTTATTTATCAAAATATTTTATTTATCTCTATAATCAAGTAGATAATCTGCAGCA ACAATCTGCTCAATAATCTGATTCAAACTGAGCCTTGAGCATTGTCGAGCAGTGAGAATAAGGC TACATAATTTAATGAACACAAGTTAAGAAAAAAATGGTGGCTAGACCAGTTTAACTTGGGCATT CCAAACCTGAAGAAGAGAACGCTTAGACCACTTGTTTGGTACTTTGTTTCATTAGCATCGGTCA ACCTTTTGACATCAACACCACACCAGTTTAATCACAAGATTGTACAGAGCCAACTTGCTGCAGA ATGTGGCCATGCCAATATTTGGGCTTTGGCAGGTCTTAATATCCATCCTCAAAAACTACCTTTT TTCCTCCTGATTTTGAGTTTGATTGAACTGCATTAATGCTATTAATAAACTGACTTGCAGGAGA CCAGTAAAAGCTGCCATTGCTGCAACTGCCGAGTATGTATCTGGTTTACTTCCTTCACATCTGG CTTATAGCCCAGCTCATGAAACTGCAACAGAGGTTTGTCATACGACTATACCTATTAGTCTTCC TATTTGTTAACTGATGGGCAGGATATGTTTCTTTTCTGGAACCAGATAAAATTATCAATATTTT TACATTTTTTCATTTGCCCTTCGCAACAGAAAGCATGCAGTCAAATTTCTATATTTTTTTTACC AGTATATATGAAAGACTTTAACACTTATCATGTGGTATACTTAGATATGCTGTACTGTAGATTT TCTTCAACATGTTCATATAAAACTTAGTGATCAAAGTTATATTTTGGAGATTCTGCCGATGTAC AGAAAACTGCAGTCTTAAACAGATTGAGTGATAGTTTAGTCTGCTACTCATTACATTTTCTGTT TTCTAATAATTCTAGGACTGGACTTGGTCTGTGGGCTGTAATCCCTTATCTATTACTTCAAAAG GCTGGCAACTTTCGGAGTTTCAACGTGATGTTATTGCTCGTAACTACATCATTACTGCAGTGGA GGAATCTATACAAATCATCAATTCAGCAATTCAACAATTGATTACAGAAAGGACAAGTATCCTA ATAATTTTGCTTTTTTTAATCTAATACGCTCGAGAGCTGCATATCATTTCATTAAAGAAGAGAA CCGTATGAGTCTGGAAACCTTACAAAAAAATAGCAACAAACAATTGCACCACGGACTATTTTGC TGGACAAAACTAAGAACAAAATTTTGCTGTTTCATTATTCAAATTCCGGACAATTTAATGTTTG TTGGGAATCATGTTGTTTTTTTTGAAAAAGATAACAGAGATGGATCAACTTTATGTATGTGTCA TGTTTCCATGTGAACTAGCTGAATCTTTGAAGAGCATGACTTTTACACTAGTTGATTTTTACAT TCCAAAATTTTTACTATGTAAAGACATCAGCTAGTTTCTCTGCAGTGAGATAATTAAAATGACC CCTATGTCGATAGTCCTCCGACTGGTATTTATAGTGTAGGTTGTGGGTTGAACCTCAACCAAGA ACAGGTTAATGTCTTCTGTAAAAAGTTGGGTTTTACCATTAAGTAGATGAAAGCCACAAGCCTA TTAGTTCATTTGTATTGCTTGCTCTCAAAACTTTTCTTGAAGGGCCTTAACAATATTTAGGTGA ACGAGGCTTTAAACTTTTCAAGGCTCAGGAGAGAGTGCTGGTTGAAAAGTATAATTCTGTTGTT AGCTTGTGGAGAAGGGTAAGTCGCTTCTTGATGTGCCTTTTTTTTTTCCTTTGTTTTACATAAA AATATTATGGCACTTATGTTTGGTTTGTATTTAGGTTTCTGCTATGTCCAAAGGATTACGATAT GGTGATGCTGTAAAGCTTACTTCAATGCTCGAGGAGGCTTCTCATGG

			
						 Conservation Information
					
						Conserved circRNAs
						
							NA						
					
						PMCS

Conservation Information
Conserved circRNAs	NA
PMCS

			
						 Functional Information
					
						Coding potential
						Y
					
						Potential coding position
						
							17053401-17058116(-)
17053391-17058141(+)
						
						Potential amino acid sequence
						
							MPSSRQDPLIMTTHEKPPRALK*(-)
MMAFSIARRAAAVPLLLVNGTYKSTVHTYLDSAILQHQLQRLSEHNSLKGGHSNHRSTLEIPIF
WFIHSEPLLLDKHYQAKSLSNMVVVVQSEVDSWESHLQCNGRSILWDLRRPVKAAIAATAEYVS
GLLPSHLAYSPAHETATEDWTWSVGCNPLSITSKGWQLSEFQRDVIARNYIITAVEESIQIINS
AIQQLITERTSERGFKLFKAQERVLVEKYNSVVSLWRRVSAMSKGLRYGDAVKLTSMLEEASHG
LSLSEDPALMMAFSIARRAAAVPLLLVNGTYKSTVHTYLDSAILQHQLQRLSEHNSLKGGHSNH
RSTLEIPIFWFIHSEPLLLDKHYQAKSLSNMVVVVQSEVDSWESHLQCNGRSILWDLRRPVKAA
IAATAEYVSGLLPSHLAYSPAHETATEDWTWSVGCNPLSITSKGWQLSEFQRDVIARNYIITAV
EESIQIINSAIQQLITERTSERGFKLFKAQERVLVEKYNSVVSLWRRVSAMSKGLRYGDAVKLT
SMLEEASHGLSLSEDPALMMAFSIARRAAAVPLLLVNGTYKSTVHTYLDSAILQHQLQRLSEHN
SLKGGHSNHRSTLEIPIFWFIHSEPLLLDKHYQAKSLSNMVVVVQSEVDSWESHLQCNGRSILW
DLRRPVKAAIAATAEYVSGLLPSHLAYSPAHETATEDWTWSVGCNPLSITSKGWQLSEFQRDVI
ARNYIITAVEESIQIINSAIQQLITERTSERGFKLFKAQERVLVEKYNSVVSLWRRVSAMSKGL
RYGDAVKLTSMLEEASHGLSLSEDPALMMAFSIARRAAAVPLLLVNGTYKSTVHTYLDSAILQH
QLQRLSEHNSLKGGHSNHRSTLEIPIFWFIHSEPLLLDKHYQAKSLSNMVVVVQSEVDSWESHL
QCNGRSILWDLRRPVKAAIAATAEYVSGLLPSHLAYSPAHETATEDWTWSVGCNPLSITSKGWQ
LSEFQRDVIARNYIITAVEESIQIINSAIQQLITERTSERGFKLFKAQERVLVEKYNSVVSLWR
RVSAMSKGLRYGDAVKLTSMLEEASH(+)
						
						Sponge-miRNAs
						
							NA						
					
						circRNA-miRNA-mRNA network
						 VISUALIZATION
					
						Potential function description
						NA

Functional Information
Coding potential	Y
Potential coding position	17053401-17058116(-) 17053391-17058141(+)
Potential amino acid sequence	MPSSRQDPLIMTTHEKPPRALK*(-) MMAFSIARRAAAVPLLLVNGTYKSTVHTYLDSAILQHQLQRLSEHNSLKGGHSNHRSTLEIPIF WFIHSEPLLLDKHYQAKSLSNMVVVVQSEVDSWESHLQCNGRSILWDLRRPVKAAIAATAEYVS GLLPSHLAYSPAHETATEDWTWSVGCNPLSITSKGWQLSEFQRDVIARNYIITAVEESIQIINS AIQQLITERTSERGFKLFKAQERVLVEKYNSVVSLWRRVSAMSKGLRYGDAVKLTSMLEEASHG LSLSEDPALMMAFSIARRAAAVPLLLVNGTYKSTVHTYLDSAILQHQLQRLSEHNSLKGGHSNH RSTLEIPIFWFIHSEPLLLDKHYQAKSLSNMVVVVQSEVDSWESHLQCNGRSILWDLRRPVKAA IAATAEYVSGLLPSHLAYSPAHETATEDWTWSVGCNPLSITSKGWQLSEFQRDVIARNYIITAV EESIQIINSAIQQLITERTSERGFKLFKAQERVLVEKYNSVVSLWRRVSAMSKGLRYGDAVKLT SMLEEASHGLSLSEDPALMMAFSIARRAAAVPLLLVNGTYKSTVHTYLDSAILQHQLQRLSEHN SLKGGHSNHRSTLEIPIFWFIHSEPLLLDKHYQAKSLSNMVVVVQSEVDSWESHLQCNGRSILW DLRRPVKAAIAATAEYVSGLLPSHLAYSPAHETATEDWTWSVGCNPLSITSKGWQLSEFQRDVI ARNYIITAVEESIQIINSAIQQLITERTSERGFKLFKAQERVLVEKYNSVVSLWRRVSAMSKGL RYGDAVKLTSMLEEASHGLSLSEDPALMMAFSIARRAAAVPLLLVNGTYKSTVHTYLDSAILQH QLQRLSEHNSLKGGHSNHRSTLEIPIFWFIHSEPLLLDKHYQAKSLSNMVVVVQSEVDSWESHL QCNGRSILWDLRRPVKAAIAATAEYVSGLLPSHLAYSPAHETATEDWTWSVGCNPLSITSKGWQ LSEFQRDVIARNYIITAVEESIQIINSAIQQLITERTSERGFKLFKAQERVLVEKYNSVVSLWR RVSAMSKGLRYGDAVKLTSMLEEASH(+)
Sponge-miRNAs	NA
circRNA-miRNA-mRNA network	VISUALIZATION
Potential function description	NA

			
						 Other Information
					
						References
						Huang et al., 2021

circRNA

Detail information of BGIOSGA008183_circ_g.5

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