Plant Circular RNA Database

Detail information of Os03g0570200_circ_g.1

			
						 General Information
					
						CircRNA Name
						Os03g0570200_circ_g.1
					
						ID in PlantcircBase
						osa_circ_020501
					
						Alias
						NA
					
						Organism
						
							Oryza sativa						
					
						Position
						
							chr3: 20678113-20682478  JBrowse»						
					
						Reference genome
						
							IRGSP-1.0.38						
					
						Type  
						
							e-circRNA							
									
						Identification method
						CIRCexplorer
					
						Parent gene
						
							Os03g0570200						
					
						Parent gene annotation
						
							Conserved hypothetical protein. (Os03t0570200-00)
							
						Parent gene strand
						-
					
						Alternative splicing
						
							Os03g0570200_circ_g.2 Os03g0570200_circ_igg.1 						
					
						Support reads
						1
					
						Tissues
						shoot
					
						Exon boundary  
						
							Yes-Yes							"Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.

						Splicing signals  
						
							CT-AC							The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.

						Number of exons covered
						Os03t0570200-00:5

General Information
CircRNA Name	Os03g0570200_circ_g.1
ID in PlantcircBase	osa_circ_020501
Alias	NA
Organism	Oryza sativa
Position	chr3: 20678113-20682478 JBrowse»
Reference genome	IRGSP-1.0.38
Type	e-circRNA
Identification method	CIRCexplorer
Parent gene	Os03g0570200
Parent gene annotation	Conserved hypothetical protein. (Os03t0570200-00)
Parent gene strand	-
Alternative splicing	Os03g0570200_circ_g.2 Os03g0570200_circ_igg.1
Support reads	1
Tissues	shoot
Exon boundary	Yes-Yes "Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.
Splicing signals	CT-AC The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.
Number of exons covered	Os03t0570200-00:5

			
						 Experimental Information
					
						Sanger sequencing for BSS  
						
							NA							Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".

						PCR primers for BSS   
						
							NA							PCR primers used in back-splicing site (BSS) validation.

						Sanger sequencing for FL   
						
							NA							Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.

						PCR primers for FL   
						
							NA							 PCR primers used in full-length (FL) sequence validation.

Experimental Information
Sanger sequencing for BSS	NA Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".
PCR primers for BSS	NA PCR primers used in back-splicing site (BSS) validation.
Sanger sequencing for FL	NA Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.
PCR primers for FL	NA PCR primers used in full-length (FL) sequence validation.

			
				
						 Sequences
					

				
						Splice junction sequence  
						
							TCCAGTGCATTCTAAGAGAAATCCAGCATACCTCGCCAAAAGATGAGAATCTCTCTGATTGTAT
CTTGTAATTTAGCTTCAGCCTCTTCTTCTGTAACTTctttgagcaagttgtgctcgcttaacct
ctgtagctgatgttggagaatggcagaatcaagatatgtatggactgttgacttagagaaacca
ttaaccaa

									
								

					

						Assembled circRNA sequence  
						
							Yes
The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).

					

						Full-length trsnacripts
						
							Transcript length: 648
Transcript exons: 20678113-20678288,20680670-20680773,20680854-20681012,20
681226-20681365,20682410-20682478
CTTTGAGCAAGTTGTGCTCGCTTAACCTCTGTAGCTGATGTTGGAGAATGGCAGAATCAAGATA
TGTATGGACTGTTGACTTAGAGAAACCATTAACCAACAGAAGTGGGACTGCAGCTGCACGACGC
GCCATTGCAAATGCCATAATCAAGGCTGGATCCTCTGATAACGACAACATGTGTTGACTGAACA
TTGGCTTCTGGAATTGTAGTAGCACAGAACTAAGGCCCTCTGTGACTGATTTTACATTAACAGG
CAACTGCTTTATGTTCCTGACTTTCTCTTGTGTCACAAAGTACAACTGAAACAACAACTTATCA
TAGTAATGGTGAGCCCTATGAGAAACAGAAGGAGCAATTACATGCCTCATAGAGCCCCATAACA
CGGAACCAAGGTGTGCGAGGAATGAATCACGAGCCACAGTGTAACTATGATGTTCCTCTGGAAC
ATCTTTAAATAAGTTCCACTTTTCCATCCTATTCAATGCATCAAGAGCTTTCTTCTTATTAATA
TCATCCGAATCTCCAGTATTGTAACCCTCCAGTTCACTTTTCAGATCATGCCTTCTCTCATCAA
GTTCTCGCCAAAAGATGAGAATCTCTCTGATTGTATCTTGTAATTTAGCTTCAGCCTCTTCTTC
TGTAACTT
						
					

						Genomic sequence
						
							CTTTGAGCAAGTTGTGCTCGCTTAACCTCTGTAGCTGATGTTGGAGAATGGCAGAATCAAGATA
TGTATGGACTGTTGACTTAGAGAAACCATTAACCAACAGAAGTGGGACTGCAGCTGCACGACGC
GCCATTGCAAATGCCATAATCAAGGCTGGATCCTCTGATAACGACAACCTATATATCAACAACC
ATAACAAATTAGACTGGAAAAAATAATTACATATTTAGTTTATAGAGGATATAATATATCTTGT
CAGTACATTTAACTCCCTTGTAGGTATAGCACTCCATAATAAGCTTACAAGGTACTACTAAATT
GTAAATGATGCAGCTAAATTCTAAGCACAGACTATCCGGGGGGGGCAGCGGCCTGGCCCCCTAC
AACGATTTTCTTTTCACACAAAATCACCTAACTAAGTAGGCAATACTATCTTACTATAAAGTTA
TAACCCACTAATTCTAAAGCTCAACATGCACACATGCCACCTCATCATCCACTACCAGTAATTA
CATACAAAACTTAAGCATGCATGCAACGTCATCTATAATTCATTGAATTCTACAAATCAACATC
CAATCATCTTCCTTCACATTATTTTTCACAATATTATTAACATATATATATATATATATATATT
CATCATTTTTATAGTACTTAGCATACATTCATCCATATAATCAAAGTGCGGGATATCATATTTC
ATTTACAATCTCATATAATCTAAATGTATCTCTCTAAACATAGTTTAACAAACCGGTTTTATTT
GTTGTTAATATCTAATATAATTTTTACTTTTACCTCAATTATTAAAAAAATATTAAAAGTTACT
TAGAAATTTCCACAGCAAAACGCAGGGAATCACCTAGTTAACTTAAGTAATACTCCATCCGTCC
CAAAATCCCTCTTATATTATGGGATGGAGGTAGTAGTGTATTAGGCCCCCTCCAAGACTCGTAG
GCTCCTCCCAAGTCAAAATCCTGGCTCCGCCACTGCAAATGATTGATTTGTAACTAACTAAACT
AAGTACATATGACTAATAAATTAGTTTGCAACCTGTAAGGGTATGCATAACAACTTGCAACTTT
GCAAGTACATAAGAATTACTAGTAATGTTGGTAAAAGACACAGAAGAACAAATCCATCAGACAA
CTTATATAGGTGCTGTACCACTAGTGAGAATGTATGTATATGTTCTTTACATGGTTATACAAAA
TAACTTGTATTTTTTATACATGAGTAACTTGTATATGTCAAACAGAAATAAAATATCATTCATC
CAATAGATAGAATTGTCCTTAGCTTACATCTATAAGCCTTTATGAAATTATTCAAGATAGAATA
GGGCTTATTGAATACAAACTTCTCACGTACACATGCTTATTGGTCTTCTATGATCACTTATACC
TACCCAAGTTCAACAAGTGTAATGAGACAAAATGGTTTGGTACCAACAGAACGTACATTCCATA
TTCAAATATGCAAGTAATTTTGCTTAGGTCACTCCTAAAATTCTACAAGAATTATAATGATGGA
AAAAGAGAGCACTTTACATGATTAGACCAGTCACTAATAGAGAGTATACTAAGTAACTGTTTTC
ATCTTCCAAACGAAACCAAAGAATTACAATTCCAATCCACCGCCCATTGGCTTGTTTGGGTAGA
GAACTGAGTTGTCCGCGGTCGCTCATGTGGCCAAGGTATCAAAGGCAACAGCTCAGCAACAGTG
AGTTTCGACTTTCGTGTTAGCTCCTTGCTTTGGCCTTAAGCCACTTAGACATAAGACTTGCCAG
TTGATTTCCATGTACTACCTCCGTTTTTTAAATAGATGACGCCGTTAACTTTTTCTCACATGTT
TGACCATTCGTCTTATTCAAAAAATTTACGTAATTATAATTTATTTTGTTATGAGTTGTTTTAT
TACTCATAGTACTTTAAGTGTGATTTATATCTTATATATTTGCAAAAAAAATTTGAATAAGACG
AATGGTCAAACATTTGAGAAAAAGTCAACGGCGTCATCTATTAAAAAACGGAGGGAGTATTAGA
TATTGTTTATTAGGGCCTCATAAAGGGTACAGCTTTCAGTGATCTCTGAACTCCCTCAGTTCTA
ATATCTCCTGATTTCAGATGCACCCATCCCCTGCACAGTGATTATCTGTTCCTTCTGCCTTCGT
GAACCATAGCCATAGCCCCAAGCCTTAGTTTTTATCAAATTGACCACCCACCATACAGACTTGA
GATCATTTACCCACAGGGTCAGGGCACAGCACAAGTATCAACAAATCAAACACTAAATGGATAC
AAATCATTGGCGTGGTCTAATCTTTCTAATACTTTTATGATCAGTATTGTGCTCTAAATGAGTT
TGATCTAGCATTATATTGGACTTGCAGACATACAATAGGAATTAGGAAGTCAGACTGCCACAAT
AAAAAACTAGCCAGGTGCAGATGACATTCACATATAACTTCCATTATGAATATTATTAAACCCC
TGGTAAGTTAATTGCTTTGCAGGACTACAAACCAAAAATTTACAAGATGAAGGTTACATACATG
TGTTGACTGAACATTGGCTTCTGGAATTGTAGTAGCACAGAACTAAGGCCCTCTGTGACTGATT
TTACATTAACAGGCAACTGCTTTATGTTCCTGACTTTCTGCATAACGTTAAAAAATGTGAGAGA
TAACTGTATTGAATTAGAATATAAGCAACATAAAAGTTGCCCCTTGAACTTACCTCTTGTGTCA
CAAAGTACAACTGAAACAACAACTTATCATAGTAATGGTGAGCCCTATGAGAAACAGAAGGAGC
AATTACATGCCTCATAGAGCCCCATAACACGGAACCAAGGTGTGCGAGGAATGAATCACGAGCC
ACAGTGTAACTATGATGTTCCTGGCACATGTGATTGAACTTCGTCATTAGAAGTACGATTAAAA
TTCTGTTATCTTAACAATTAAATATTAGACTTCAGTAATTGCATGCACAATTGCACAGTGAATA
TGTGTTTTTAGTTGTCCTGCTTATTAGGGAAATGTTTTGCTATAGAAACTGATTTTACAATGTT
CTTTTTATGTTGTGTCGTAGAAGCTGTTGGACAAAGCTAACCTCTGGAACATCTTTAAATAAGT
TCCACTTTTCCATCCTATTCAATGCATCAAGAGCTTTCTTCTTATTAATATCATCCGAATCTCC
AGTATTGTAACCCTCCAGTTCACTTTTCAGATCATGCCTTCTCTCATCAAGTTCTACATTTGAA
GAAAAATAAAGGTTCTAGTTAAAAGGGAAGGTCTTTCTGATAAACCCAATTAAATTTTATGAAC
AGTACAAGGCTGCCCAGCAACTACCATAAACTGAAGATCTCAGCAAAGAAAAGAACACTGAATA
GCTTATTGGCATCAACAACTTGTGAGAAAACATGGCCAAAGGACAAAACAATAAAAACAATGTT
GTAATGATTGGAGAGAAACATAAGGAATGTCTTTCATGTATGGTACAAACAGTAGCTCAAGTGC
ATATAACTCAAAAATATCAACTACAAGTAAAGTCTACCACTATGTAGTAATGTGAATAATTAAA
AGGAACACCCAAATTTATGGCCATGAAAAGTACCTTTGCAAAGGGCAAGCTGTACCCTTCTTCC
AACACAATGCTTGAAGGCAAAAAGTTCGTATACATCAATCTCTGCCAATAGGATATCTACTGCA
TGGTAATTCTGAACCCCCAAAATGGCATCAGATAAACTAAGTCAAGAGCTAGTTCAAGATGTCA
TAACAATATACAGAACCAAAAGGGAAAGTTACACAACAAACAAGATTGCAAGAAGAAACTTGTT
GTCTATAGTGTTAACATCAGTTGGGACTTGGGATGCCACTATTTTGTGGAATATCGTTGCCAGT
GATGTGCTAGTTGTAATGATTAATGGGACCACTTGTATTTTGAATCGTCAATAGGTCTAGCAAA
AAAAGGTATTTAGTAGAATACAGAGCAAAATATTTCCAAGCTGCCAAAATATTTCTGCATCCTC
TCTTCTCTACAGTTCTGATCTCAAAGCTCTCACTCTACTGATCTCAATTGAACTTTACAACCAC
CCTCCAAAATAAGAGCTAGGGGCAAGAGAAAGAAAAGGAATTGGTATAAGCAACATGTGCACCT
TGAAAATCTACGGTACCTAACATGGAGATTACAAGAATAAGTACCATCATTTAGCCTATGAGAT
TGAGTAGTAAAAAATAATTTATAAACGAATAGATTGTTAATATCCAGTGCATTCTAAGAGAAAT
CCAGCATACCTCGCCAAAAGATGAGAATCTCTCTGATTGTATCTTGTAATTTAGCTTCAGCCTC
TTCTTCTGTAACTT
						
					

			
		

Sequences
Splice junction sequence	TCCAGTGCATTCTAAGAGAAATCCAGCATACCTCGCCAAAAGATGAGAATCTCTCTGATTGTAT CTTGTAATTTAGCTTCAGCCTCTTCTTCTGTAACTTctttgagcaagttgtgctcgcttaacct ctgtagctgatgttggagaatggcagaatcaagatatgtatggactgttgacttagagaaacca ttaaccaa
Assembled circRNA sequence	Yes The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).
Full-length trsnacripts	Transcript length: 648 Transcript exons: 20678113-20678288,20680670-20680773,20680854-20681012,20 681226-20681365,20682410-20682478 CTTTGAGCAAGTTGTGCTCGCTTAACCTCTGTAGCTGATGTTGGAGAATGGCAGAATCAAGATA TGTATGGACTGTTGACTTAGAGAAACCATTAACCAACAGAAGTGGGACTGCAGCTGCACGACGC GCCATTGCAAATGCCATAATCAAGGCTGGATCCTCTGATAACGACAACATGTGTTGACTGAACA TTGGCTTCTGGAATTGTAGTAGCACAGAACTAAGGCCCTCTGTGACTGATTTTACATTAACAGG CAACTGCTTTATGTTCCTGACTTTCTCTTGTGTCACAAAGTACAACTGAAACAACAACTTATCA TAGTAATGGTGAGCCCTATGAGAAACAGAAGGAGCAATTACATGCCTCATAGAGCCCCATAACA CGGAACCAAGGTGTGCGAGGAATGAATCACGAGCCACAGTGTAACTATGATGTTCCTCTGGAAC ATCTTTAAATAAGTTCCACTTTTCCATCCTATTCAATGCATCAAGAGCTTTCTTCTTATTAATA TCATCCGAATCTCCAGTATTGTAACCCTCCAGTTCACTTTTCAGATCATGCCTTCTCTCATCAA GTTCTCGCCAAAAGATGAGAATCTCTCTGATTGTATCTTGTAATTTAGCTTCAGCCTCTTCTTC TGTAACTT
Genomic sequence	CTTTGAGCAAGTTGTGCTCGCTTAACCTCTGTAGCTGATGTTGGAGAATGGCAGAATCAAGATA TGTATGGACTGTTGACTTAGAGAAACCATTAACCAACAGAAGTGGGACTGCAGCTGCACGACGC GCCATTGCAAATGCCATAATCAAGGCTGGATCCTCTGATAACGACAACCTATATATCAACAACC ATAACAAATTAGACTGGAAAAAATAATTACATATTTAGTTTATAGAGGATATAATATATCTTGT CAGTACATTTAACTCCCTTGTAGGTATAGCACTCCATAATAAGCTTACAAGGTACTACTAAATT GTAAATGATGCAGCTAAATTCTAAGCACAGACTATCCGGGGGGGGCAGCGGCCTGGCCCCCTAC AACGATTTTCTTTTCACACAAAATCACCTAACTAAGTAGGCAATACTATCTTACTATAAAGTTA TAACCCACTAATTCTAAAGCTCAACATGCACACATGCCACCTCATCATCCACTACCAGTAATTA CATACAAAACTTAAGCATGCATGCAACGTCATCTATAATTCATTGAATTCTACAAATCAACATC CAATCATCTTCCTTCACATTATTTTTCACAATATTATTAACATATATATATATATATATATATT CATCATTTTTATAGTACTTAGCATACATTCATCCATATAATCAAAGTGCGGGATATCATATTTC ATTTACAATCTCATATAATCTAAATGTATCTCTCTAAACATAGTTTAACAAACCGGTTTTATTT GTTGTTAATATCTAATATAATTTTTACTTTTACCTCAATTATTAAAAAAATATTAAAAGTTACT TAGAAATTTCCACAGCAAAACGCAGGGAATCACCTAGTTAACTTAAGTAATACTCCATCCGTCC CAAAATCCCTCTTATATTATGGGATGGAGGTAGTAGTGTATTAGGCCCCCTCCAAGACTCGTAG GCTCCTCCCAAGTCAAAATCCTGGCTCCGCCACTGCAAATGATTGATTTGTAACTAACTAAACT AAGTACATATGACTAATAAATTAGTTTGCAACCTGTAAGGGTATGCATAACAACTTGCAACTTT GCAAGTACATAAGAATTACTAGTAATGTTGGTAAAAGACACAGAAGAACAAATCCATCAGACAA CTTATATAGGTGCTGTACCACTAGTGAGAATGTATGTATATGTTCTTTACATGGTTATACAAAA TAACTTGTATTTTTTATACATGAGTAACTTGTATATGTCAAACAGAAATAAAATATCATTCATC CAATAGATAGAATTGTCCTTAGCTTACATCTATAAGCCTTTATGAAATTATTCAAGATAGAATA GGGCTTATTGAATACAAACTTCTCACGTACACATGCTTATTGGTCTTCTATGATCACTTATACC TACCCAAGTTCAACAAGTGTAATGAGACAAAATGGTTTGGTACCAACAGAACGTACATTCCATA TTCAAATATGCAAGTAATTTTGCTTAGGTCACTCCTAAAATTCTACAAGAATTATAATGATGGA AAAAGAGAGCACTTTACATGATTAGACCAGTCACTAATAGAGAGTATACTAAGTAACTGTTTTC ATCTTCCAAACGAAACCAAAGAATTACAATTCCAATCCACCGCCCATTGGCTTGTTTGGGTAGA GAACTGAGTTGTCCGCGGTCGCTCATGTGGCCAAGGTATCAAAGGCAACAGCTCAGCAACAGTG AGTTTCGACTTTCGTGTTAGCTCCTTGCTTTGGCCTTAAGCCACTTAGACATAAGACTTGCCAG TTGATTTCCATGTACTACCTCCGTTTTTTAAATAGATGACGCCGTTAACTTTTTCTCACATGTT TGACCATTCGTCTTATTCAAAAAATTTACGTAATTATAATTTATTTTGTTATGAGTTGTTTTAT TACTCATAGTACTTTAAGTGTGATTTATATCTTATATATTTGCAAAAAAAATTTGAATAAGACG AATGGTCAAACATTTGAGAAAAAGTCAACGGCGTCATCTATTAAAAAACGGAGGGAGTATTAGA TATTGTTTATTAGGGCCTCATAAAGGGTACAGCTTTCAGTGATCTCTGAACTCCCTCAGTTCTA ATATCTCCTGATTTCAGATGCACCCATCCCCTGCACAGTGATTATCTGTTCCTTCTGCCTTCGT GAACCATAGCCATAGCCCCAAGCCTTAGTTTTTATCAAATTGACCACCCACCATACAGACTTGA GATCATTTACCCACAGGGTCAGGGCACAGCACAAGTATCAACAAATCAAACACTAAATGGATAC AAATCATTGGCGTGGTCTAATCTTTCTAATACTTTTATGATCAGTATTGTGCTCTAAATGAGTT TGATCTAGCATTATATTGGACTTGCAGACATACAATAGGAATTAGGAAGTCAGACTGCCACAAT AAAAAACTAGCCAGGTGCAGATGACATTCACATATAACTTCCATTATGAATATTATTAAACCCC TGGTAAGTTAATTGCTTTGCAGGACTACAAACCAAAAATTTACAAGATGAAGGTTACATACATG TGTTGACTGAACATTGGCTTCTGGAATTGTAGTAGCACAGAACTAAGGCCCTCTGTGACTGATT TTACATTAACAGGCAACTGCTTTATGTTCCTGACTTTCTGCATAACGTTAAAAAATGTGAGAGA TAACTGTATTGAATTAGAATATAAGCAACATAAAAGTTGCCCCTTGAACTTACCTCTTGTGTCA CAAAGTACAACTGAAACAACAACTTATCATAGTAATGGTGAGCCCTATGAGAAACAGAAGGAGC AATTACATGCCTCATAGAGCCCCATAACACGGAACCAAGGTGTGCGAGGAATGAATCACGAGCC ACAGTGTAACTATGATGTTCCTGGCACATGTGATTGAACTTCGTCATTAGAAGTACGATTAAAA TTCTGTTATCTTAACAATTAAATATTAGACTTCAGTAATTGCATGCACAATTGCACAGTGAATA TGTGTTTTTAGTTGTCCTGCTTATTAGGGAAATGTTTTGCTATAGAAACTGATTTTACAATGTT CTTTTTATGTTGTGTCGTAGAAGCTGTTGGACAAAGCTAACCTCTGGAACATCTTTAAATAAGT TCCACTTTTCCATCCTATTCAATGCATCAAGAGCTTTCTTCTTATTAATATCATCCGAATCTCC AGTATTGTAACCCTCCAGTTCACTTTTCAGATCATGCCTTCTCTCATCAAGTTCTACATTTGAA GAAAAATAAAGGTTCTAGTTAAAAGGGAAGGTCTTTCTGATAAACCCAATTAAATTTTATGAAC AGTACAAGGCTGCCCAGCAACTACCATAAACTGAAGATCTCAGCAAAGAAAAGAACACTGAATA GCTTATTGGCATCAACAACTTGTGAGAAAACATGGCCAAAGGACAAAACAATAAAAACAATGTT GTAATGATTGGAGAGAAACATAAGGAATGTCTTTCATGTATGGTACAAACAGTAGCTCAAGTGC ATATAACTCAAAAATATCAACTACAAGTAAAGTCTACCACTATGTAGTAATGTGAATAATTAAA AGGAACACCCAAATTTATGGCCATGAAAAGTACCTTTGCAAAGGGCAAGCTGTACCCTTCTTCC AACACAATGCTTGAAGGCAAAAAGTTCGTATACATCAATCTCTGCCAATAGGATATCTACTGCA TGGTAATTCTGAACCCCCAAAATGGCATCAGATAAACTAAGTCAAGAGCTAGTTCAAGATGTCA TAACAATATACAGAACCAAAAGGGAAAGTTACACAACAAACAAGATTGCAAGAAGAAACTTGTT GTCTATAGTGTTAACATCAGTTGGGACTTGGGATGCCACTATTTTGTGGAATATCGTTGCCAGT GATGTGCTAGTTGTAATGATTAATGGGACCACTTGTATTTTGAATCGTCAATAGGTCTAGCAAA AAAAGGTATTTAGTAGAATACAGAGCAAAATATTTCCAAGCTGCCAAAATATTTCTGCATCCTC TCTTCTCTACAGTTCTGATCTCAAAGCTCTCACTCTACTGATCTCAATTGAACTTTACAACCAC CCTCCAAAATAAGAGCTAGGGGCAAGAGAAAGAAAAGGAATTGGTATAAGCAACATGTGCACCT TGAAAATCTACGGTACCTAACATGGAGATTACAAGAATAAGTACCATCATTTAGCCTATGAGAT TGAGTAGTAAAAAATAATTTATAAACGAATAGATTGTTAATATCCAGTGCATTCTAAGAGAAAT CCAGCATACCTCGCCAAAAGATGAGAATCTCTCTGATTGTATCTTGTAATTTAGCTTCAGCCTC TTCTTCTGTAACTT

			
						 Conservation Information
					
						Conserved circRNAs
						
							osi_circ_011681 						
					
						PMCS
						0.312381507

Conservation Information
Conserved circRNAs	osi_circ_011681
PMCS	0.312381507

			
						 Functional Information
					
						Coding potential
						Y
					
						Potential coding position
						
							20682422-20678147(+)
20681263-20678115(-)
						
						Potential amino acid sequence
						
							MRISLIVSCNLASASSSVTSLSKLCSLNLCS*(+)
MEKWNLFKDVPEEHHSYTVARDSFLAHLGSVLWGSMRHVIAPSVSHRAHHYYDKLLFQLYFVTQ
EKVRNIKQLPVNVKSVTEGLSSVLLQFQKPMFSQHMLSLSEDPALIMAFAMARRAAAVPLLLVN
GFSKSTVHTYLDSAILQHQLQRLSEHNLLKEVTEEEAEAKLQDTIREILIFWRELDERRHDLKS
ELEGYNTGDSDDINKKKALDALNRMEKWNLFKDVPEEHHSYTVARDSFLAHLGSVLWGSMRHVI
APSVSHRAHHYYDKLLFQLYFVTQEKVRNIKQLPVNVKSVTEGLSSVLLQFQKPMFSQHMLSLS
EDPALIMAFAMARRAAAVPLLLVNGFSKSTVHTYLDSAILQHQLQRLSEHNLLKEVTEEEAEAK
LQDTIREILIFWRELDERRHDLKSELEGYNTGDSDDINKKKALDALNRMEKWNLFKDVPEEHHS
YTVARDSFLAHLGSVLWGSMRHVIAPSVSHRAHHYYDKLLFQLYFVTQEKVRNIKQLPVNVKSV
TEGLSSVLLQFQKPMFSQHMLSLSEDPALIMAFAMARRAAAVPLLLVNGFSKSTVHTYLDSAIL
QHQLQRLSEHNLLKEVTEEEAEAKLQDTIREILIFWRELDERRHDLKSELEGYNTGDSDDINKK
KALDALNRMEKWNLFKDVPEEHHSYTVARDSFLAHLGSVLWGSMRHVIAPSVSHRAHHYYDKLL
FQLYFVTQEKVRNIKQLPVNVKSVTEGLSSVLLQFQKPMFSQHMLSLSEDPALIMAFAMARRAA
AVPLLLVNGFSKSTVHTYLDSAILQHQLQRLSEHNLLK(-)
						
						Sponge-miRNAs
						
							NA						
					
						circRNA-miRNA-mRNA network
						 VISUALIZATION
					
						Potential function description
						NA

Functional Information
Coding potential	Y
Potential coding position	20682422-20678147(+) 20681263-20678115(-)
Potential amino acid sequence	MRISLIVSCNLASASSSVTSLSKLCSLNLCS*(+) MEKWNLFKDVPEEHHSYTVARDSFLAHLGSVLWGSMRHVIAPSVSHRAHHYYDKLLFQLYFVTQ EKVRNIKQLPVNVKSVTEGLSSVLLQFQKPMFSQHMLSLSEDPALIMAFAMARRAAAVPLLLVN GFSKSTVHTYLDSAILQHQLQRLSEHNLLKEVTEEEAEAKLQDTIREILIFWRELDERRHDLKS ELEGYNTGDSDDINKKKALDALNRMEKWNLFKDVPEEHHSYTVARDSFLAHLGSVLWGSMRHVI APSVSHRAHHYYDKLLFQLYFVTQEKVRNIKQLPVNVKSVTEGLSSVLLQFQKPMFSQHMLSLS EDPALIMAFAMARRAAAVPLLLVNGFSKSTVHTYLDSAILQHQLQRLSEHNLLKEVTEEEAEAK LQDTIREILIFWRELDERRHDLKSELEGYNTGDSDDINKKKALDALNRMEKWNLFKDVPEEHHS YTVARDSFLAHLGSVLWGSMRHVIAPSVSHRAHHYYDKLLFQLYFVTQEKVRNIKQLPVNVKSV TEGLSSVLLQFQKPMFSQHMLSLSEDPALIMAFAMARRAAAVPLLLVNGFSKSTVHTYLDSAIL QHQLQRLSEHNLLKEVTEEEAEAKLQDTIREILIFWRELDERRHDLKSELEGYNTGDSDDINKK KALDALNRMEKWNLFKDVPEEHHSYTVARDSFLAHLGSVLWGSMRHVIAPSVSHRAHHYYDKLL FQLYFVTQEKVRNIKQLPVNVKSVTEGLSSVLLQFQKPMFSQHMLSLSEDPALIMAFAMARRAA AVPLLLVNGFSKSTVHTYLDSAILQHQLQRLSEHNLLK(-)
Sponge-miRNAs	NA
circRNA-miRNA-mRNA network	VISUALIZATION
Potential function description	NA

			
						 Other Information
					
						References
						Chu et al., 2017

circRNA

Detail information of Os03g0570200_circ_g.1

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