Plant Circular RNA Database

Detail information of Os03g0682600_circ_g.2

			
						 General Information
					
						CircRNA Name
						Os03g0682600_circ_g.2
					
						ID in PlantcircBase
						osa_circ_020991
					
						Alias
						NA
					
						Organism
						
							Oryza sativa						
					
						Position
						
							chr3: 27166774-27171176  JBrowse»						
					
						Reference genome
						
							IRGSP-1.0.38						
					
						Type  
						
							e-circRNA							
									
						Identification method
						CIRCexplorer
					
						Parent gene
						
							Os03g0682600						
					
						Parent gene annotation
						
							Protein argonaute 11. (Os03t0682600-00)
							
						Parent gene strand
						-
					
						Alternative splicing
						
							Os03g0682600_circ_igg.1 Os03g0682600_circ_g.1 Os03g0682600_circ_g.3 Os03g0682600_circ_g.4 Os03g0682600_circ_g.5 						
					
						Support reads
						1
					
						Tissues
						root
					
						Exon boundary  
						
							Yes-Yes							"Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.

						Splicing signals  
						
							CT-AC							The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.

						Number of exons covered
						Os03t0682600-00:11

General Information
CircRNA Name	Os03g0682600_circ_g.2
ID in PlantcircBase	osa_circ_020991
Alias	NA
Organism	Oryza sativa
Position	chr3: 27166774-27171176 JBrowse»
Reference genome	IRGSP-1.0.38
Type	e-circRNA
Identification method	CIRCexplorer
Parent gene	Os03g0682600
Parent gene annotation	Protein argonaute 11. (Os03t0682600-00)
Parent gene strand	-
Alternative splicing	Os03g0682600_circ_igg.1 Os03g0682600_circ_g.1 Os03g0682600_circ_g.3 Os03g0682600_circ_g.4 Os03g0682600_circ_g.5
Support reads	1
Tissues	root
Exon boundary	Yes-Yes "Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.
Splicing signals	CT-AC The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.
Number of exons covered	Os03t0682600-00:11

			
						 Experimental Information
					
						Sanger sequencing for BSS  
						
							NA							Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".

						PCR primers for BSS   
						
							NA							PCR primers used in back-splicing site (BSS) validation.

						Sanger sequencing for FL   
						
							NA							Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.

						PCR primers for FL   
						
							NA							 PCR primers used in full-length (FL) sequence validation.

Experimental Information
Sanger sequencing for BSS	NA Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".
PCR primers for BSS	NA PCR primers used in back-splicing site (BSS) validation.
Sanger sequencing for FL	NA Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.
PCR primers for FL	NA PCR primers used in full-length (FL) sequence validation.

			
				
						 Sequences
					

				
						Splice junction sequence  
						
							CAGGGAGTACACGAGCATCGACTAAGGCAAGTTGGTTTGTCACCCCGATGCCAAATTCTCTGGC
ATGATAATCATTGCCATAGTTGTTTTCATTAGCAATctgaatgccagaatggctacaaaggtaa
aagtcaaattcactgggatggcatatcttagtgtcaacaacagttcctaagaagaaaaaagtta
ttactatt

									
								

					

						Assembled circRNA sequence  
						
							NA
The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).

					

						Full-length trsnacripts
						
							NA						
					

						Genomic sequence
						
							CTGAATGCCAGAATGGCTACAAAGGTAAAAGTCAAATTCACTGGGATGGCATATCTTAGTGTCA
ACAACAGTTCCTAAGAAGAAAAAAGTTATTACTATTTGAGATAATACAAAATTTTGCATCAGGC
TAATTGCTGCCTGGAAAGTTAATTCTTACCAGGTAAGATGTTTCTGCTTCGATCCATCTGATCC
CTCGCGTGATGATCTTCAGGAAAAAGACGGGTGTGATGCCTCTTTTGCACCACAACAAAGGTAA
CTGGAGGGAGGTAGCCCTCCTCTATGCTAGCACAAGCCTGCAGGCAGAAGCATACATAGACTAA
GAAGATCACAAAACAACACAAATGCAAACTGCAAGCACACAAAACATAGAAACATGAGAGATAA
TGAGGCTGAAAAGGACCTTCCGAATTGCATCCATTTCACTAAGCAGAACTTGGCTAAACTGGCC
TTCACTAACACCGTCTCTGCATGCCAAGAAAATTGAGTTCTCGTAGCAGATAAAAAAGGAGAAT
TAGAATAACATAGCACATATTATTTGCTTCACAAACCGATAAAATATTATCCTTCCAGGTTTGT
AGCTGCCATTTGCTTTACGGAAAGACTCTATCAACTCTCTGAAACAACAAAGTTTTTTAATGAA
AACATGCGCGAGCAAGGTTATTGCAGCAAAAGAATAATTAAATTAGACACTGTCCATGCCAAAA
GTACCTGATCATTCCACCATAAACAAGTCTGTTCTGTGAATCTTTCACCTCTGTGAAGAGATCA
GCTATGATCTCTTCCCTATGGCTTTGCGAAGAAACCGAGCATTTGTATTTTGACACTTCTGGCC
AATCCATCGATGCAACAACCTGCTGACAGTATTAACATAACTTGAAACATGAAGCATATTATGA
TAAGGAATCGTACGAGCAAGATAACTAGTAAGAGAGTACAGATTTCTCGTAAAGGAGTGAAATC
ACTCATTGCTAGTATCTGTGAATTTTAAAAGAGGACAATACTGAAAGCAAGATATAGTAGCTAC
ACCAACACAAAAGAAGCATTCAATTTAAATCGAGATCTTTTACGGTGTTTGCATTCCAAAATAG
GGAAAAATCCAATGCTCCTCAATGCCAGATACCATGTAAAAAGTATTTGAGTATTGGTTAGGTA
AGTATCAAGGGTAAAATAATAAATTTGCTAGTAGAGAGAAAAAGTATAATTGTCTCTAAATTTA
AATCGGTACCGTGTAGGTTCCAATTAAGTCGTTTGCCTATTAATGGCCTATAGGTTCTCGTTTG
CGTGGTTTTCTCTAGATTTACATTGTGTTCTTCAATGTTCTTGTTTGCGTGCACGTGCTTTCTT
CTAGATTTATATTTTGTTCCAAATAACACGTTTAACGTTTATTGGCACAAAAGTTCTGGTTTGT
GCGGTTTTATCTTTTTATGTTTTGTTCTCCTCAACCATGTTGGCGCTTCTCTCTCTGTTTAATT
CTGATGAACGAGTTCTAACCCAAGAATAAGAACGGGACAGATGGGGAAGAAGAAAAAAAGATCC
AATTTTAGAGCTTTTACGGTGTTTGCGAGATACTTAGAAGTATTGAGAGGTGGAGTAATATAAG
CCGTTGATCAAGAGAGGGGCAAGGTATGGAAAAAGAATTTTGTAATCAATGGCAGTGAAGTAAT
TAGTTCAATATGAACAACGTAAATCGGGCATTAATTTAGTTATTGAATAGATCTCACGAAAAAA
GATCAGATTGGATCTTTTTTTTCTTCTTCCCCATCGGTCCTATTCTTATTCTTGGGTTAGAACT
TGTTCATCAAAATTAAACAGAGCGAGAAGCGCCCACATGGTTGAGGATTCAATATGAGATCGGG
TAAGATCTACTTTACATAGTTGATTAGTTATGTATGCAGTTCACATATTCCATCGTTTATCATG
TTCAAATGGAAGCAAGCATGATGAATATTTTATCTACAGTTCATGTTTTCGAGGGATATATCGA
TAAAATATTTAACTTAAATTGATTACCTTCGGTGATATTTTAACCGGTCAGGTTCTTGAAACAC
ATTAAAAATCTCTTCTTGAAACAAAATATAAATCTCTAAAAGAATTAAATGAATTAGTTTTGCC
ATGTTCTTTGGAATAAAACATAAAAAGATAAAACCGCGCAAACCAGAACTTTTGCCCCAATAAA
CGTGTTATTTGGAATAAAATATAAATCTAGAAGAAAACACGTGCACGCAAACAAGAACATTGAA
GAACACAATGTAAATCTAGAGAAAACCACGCAAAAGTTAACCTATAGGCCATTAATAGGCAAAC
GACTTAATTGGTACCTACACGGTACCTATTTAAATTGAGAGACAATTATACCTTGTTCTCTCTA
CTAGCAAATTTATTATTTTACCCTTGATACCTAAGTACCTAACCAATACTTAAATACTTTTTAC
ATGGTACCTGTCATTAAGGAGCATTGGATTTTTACCTATCTTGAAATGCAAACACCATAAAAAA
TCTCGATTTTGCTCCGGTCCAGCAAAAAGTATCTCGAGGTACCGCCGTACCGGTGCCTCACGGT
ACCAAATCGTCCAGTACCTCGAGATACTTTTTCTCGACCGGAGCAAATCTCTTCAATTTATATT
CCCCAGCCCGCAATTGACGTATAACATAAACACTTCTGTTTATAATTCTGTCACATACAATCAC
CGAAGTCATTGGCTATATCTTTTACACTGAGGCACATTTAAAAACTAAATGGAATTAACTTACA
TCGCCATGAAAACAAGTAGAGATCAAGAAAATACTAACCGCAGCAATTGATGGAGATGAATCCT
CCCCGGCAGGTGGATGGGTCACGTCAGCTCCAAAGATCATTGTAGGCATATCTGTTAACAGAGG
AATTCTCCTATGCAAAGCATCTTCCAGTACTGTATTTCGTCCACCAACCTATGTTCAAATTGTT
AGTGGAGTGAGCTACTCTCAAATAATAGCCAAATTGTTCGTAAAGCTAAAGAGACAGTGCCCAC
GTAATCCATGTACTGTCAAAGTAGTATATCCTACCTTAACATTGATTTTAAGTGCCAGGTTTCG
GAGATATTGTGTTGGCGGACATTCTGAACATTCCTAGCTAAACAGCACTGAGTTATCACACCAA
GTTCAGTTTCACAAAGCCGCTTTATCCTTCCTGCAGATATTACAGATGTGAGACAACAGATGGT
TAGCAAAAACACTGCCAAAAAGAAAAGGTATACCTGAAAAATAATTATCATCAATTTGAGAAGT
AATTTATGTGCTTACCATAAAAGACAGTTGCATTTGCATCAGGTAGTACTATTACCAGTAACTC
AAGTTGTTGCCCGATCACACCTTGTTGAGAAAGAAATTCTGCAGATTGTCGATGTATATCTCTG
ACAGCAGCATCTAAGTGATCTTGGCGTTCTTGCCTAATACGGACACATGGTTCCCCGGTAATTT
GCTATGGAAAGGAGGATTATACAATTAAACAAACGTATACATGCCCGAAAGAGGACCATATAGA
AAGATAAAATCTTTACCATGCCAATGCTATTGCACACACGAACCAACTCCTTGCAAAACGTCCT
AACTTCAGCCAGACGTACGCAGGAAGCAAAAGTCAAGCATGCCCAGTAATTGATGGATCCACCA
TTGAGCATCCTCTGAAATATCCACAAACAAAAGAGAATAATTGTTCTCATATCCATTCAAGCAA
CTTACAGTAGGTTAAAATAATATGATTTATATAAACAAAAATATAGAAATATTTTTAAAAAATA
TATAACACTGTTAATTTTTCCAGAAAACAAGAATTGATCACAGAAGAAGTGGAAACATTACCAT
GTTAACCTTTAATCACTAGTACATACAAGTAATTAGATTTGTCACATGAAAAGTAGAATTATCA
TAAAAATACTTCTCATTGTATTTTTTTTATTAAGAAACATGCGAGATCATATAATTTAGAAAGA
TAATGGACAGGATTGTGTGTGAAACACATCATCAATGTTCAAAACAGAAGGTATATCACATTAT
CCTCTCCCAAAATTGAAAATAGATGTGCAATTACATTCTTCTGGGAAAACATAAATAATTGAAA
TTTACCACAATTTGACAGTCTAGAATATAGCTCAAAATGAAAAGAATATACCTTGTTATTCATG
TTCCACTGACCAATGGAAGGATTACATACTTTCTCTTGTCCAGAGTCATGGTACTTAAGCTAAA
AGATAGAAATAGGAAATCCAATGCATAAACAAACGATAATGATATAATTTACCCAAAATAAATA
TATTTACCATTGGAGCAGGGAGTACACGAGCATCGACTAAGGCAAGTTGGTTTGTCACCCCGAT
GCCAAATTCTCTGGCATGATAATCATTGCCATAGTTGTTTTCATTAGCAAT
						
					

			
		

Sequences
Splice junction sequence	CAGGGAGTACACGAGCATCGACTAAGGCAAGTTGGTTTGTCACCCCGATGCCAAATTCTCTGGC ATGATAATCATTGCCATAGTTGTTTTCATTAGCAATctgaatgccagaatggctacaaaggtaa aagtcaaattcactgggatggcatatcttagtgtcaacaacagttcctaagaagaaaaaagtta ttactatt
Assembled circRNA sequence	NA The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).
Full-length trsnacripts	NA
Genomic sequence	CTGAATGCCAGAATGGCTACAAAGGTAAAAGTCAAATTCACTGGGATGGCATATCTTAGTGTCA ACAACAGTTCCTAAGAAGAAAAAAGTTATTACTATTTGAGATAATACAAAATTTTGCATCAGGC TAATTGCTGCCTGGAAAGTTAATTCTTACCAGGTAAGATGTTTCTGCTTCGATCCATCTGATCC CTCGCGTGATGATCTTCAGGAAAAAGACGGGTGTGATGCCTCTTTTGCACCACAACAAAGGTAA CTGGAGGGAGGTAGCCCTCCTCTATGCTAGCACAAGCCTGCAGGCAGAAGCATACATAGACTAA GAAGATCACAAAACAACACAAATGCAAACTGCAAGCACACAAAACATAGAAACATGAGAGATAA TGAGGCTGAAAAGGACCTTCCGAATTGCATCCATTTCACTAAGCAGAACTTGGCTAAACTGGCC TTCACTAACACCGTCTCTGCATGCCAAGAAAATTGAGTTCTCGTAGCAGATAAAAAAGGAGAAT TAGAATAACATAGCACATATTATTTGCTTCACAAACCGATAAAATATTATCCTTCCAGGTTTGT AGCTGCCATTTGCTTTACGGAAAGACTCTATCAACTCTCTGAAACAACAAAGTTTTTTAATGAA AACATGCGCGAGCAAGGTTATTGCAGCAAAAGAATAATTAAATTAGACACTGTCCATGCCAAAA GTACCTGATCATTCCACCATAAACAAGTCTGTTCTGTGAATCTTTCACCTCTGTGAAGAGATCA GCTATGATCTCTTCCCTATGGCTTTGCGAAGAAACCGAGCATTTGTATTTTGACACTTCTGGCC AATCCATCGATGCAACAACCTGCTGACAGTATTAACATAACTTGAAACATGAAGCATATTATGA TAAGGAATCGTACGAGCAAGATAACTAGTAAGAGAGTACAGATTTCTCGTAAAGGAGTGAAATC ACTCATTGCTAGTATCTGTGAATTTTAAAAGAGGACAATACTGAAAGCAAGATATAGTAGCTAC ACCAACACAAAAGAAGCATTCAATTTAAATCGAGATCTTTTACGGTGTTTGCATTCCAAAATAG GGAAAAATCCAATGCTCCTCAATGCCAGATACCATGTAAAAAGTATTTGAGTATTGGTTAGGTA AGTATCAAGGGTAAAATAATAAATTTGCTAGTAGAGAGAAAAAGTATAATTGTCTCTAAATTTA AATCGGTACCGTGTAGGTTCCAATTAAGTCGTTTGCCTATTAATGGCCTATAGGTTCTCGTTTG CGTGGTTTTCTCTAGATTTACATTGTGTTCTTCAATGTTCTTGTTTGCGTGCACGTGCTTTCTT CTAGATTTATATTTTGTTCCAAATAACACGTTTAACGTTTATTGGCACAAAAGTTCTGGTTTGT GCGGTTTTATCTTTTTATGTTTTGTTCTCCTCAACCATGTTGGCGCTTCTCTCTCTGTTTAATT CTGATGAACGAGTTCTAACCCAAGAATAAGAACGGGACAGATGGGGAAGAAGAAAAAAAGATCC AATTTTAGAGCTTTTACGGTGTTTGCGAGATACTTAGAAGTATTGAGAGGTGGAGTAATATAAG CCGTTGATCAAGAGAGGGGCAAGGTATGGAAAAAGAATTTTGTAATCAATGGCAGTGAAGTAAT TAGTTCAATATGAACAACGTAAATCGGGCATTAATTTAGTTATTGAATAGATCTCACGAAAAAA GATCAGATTGGATCTTTTTTTTCTTCTTCCCCATCGGTCCTATTCTTATTCTTGGGTTAGAACT TGTTCATCAAAATTAAACAGAGCGAGAAGCGCCCACATGGTTGAGGATTCAATATGAGATCGGG TAAGATCTACTTTACATAGTTGATTAGTTATGTATGCAGTTCACATATTCCATCGTTTATCATG TTCAAATGGAAGCAAGCATGATGAATATTTTATCTACAGTTCATGTTTTCGAGGGATATATCGA TAAAATATTTAACTTAAATTGATTACCTTCGGTGATATTTTAACCGGTCAGGTTCTTGAAACAC ATTAAAAATCTCTTCTTGAAACAAAATATAAATCTCTAAAAGAATTAAATGAATTAGTTTTGCC ATGTTCTTTGGAATAAAACATAAAAAGATAAAACCGCGCAAACCAGAACTTTTGCCCCAATAAA CGTGTTATTTGGAATAAAATATAAATCTAGAAGAAAACACGTGCACGCAAACAAGAACATTGAA GAACACAATGTAAATCTAGAGAAAACCACGCAAAAGTTAACCTATAGGCCATTAATAGGCAAAC GACTTAATTGGTACCTACACGGTACCTATTTAAATTGAGAGACAATTATACCTTGTTCTCTCTA CTAGCAAATTTATTATTTTACCCTTGATACCTAAGTACCTAACCAATACTTAAATACTTTTTAC ATGGTACCTGTCATTAAGGAGCATTGGATTTTTACCTATCTTGAAATGCAAACACCATAAAAAA TCTCGATTTTGCTCCGGTCCAGCAAAAAGTATCTCGAGGTACCGCCGTACCGGTGCCTCACGGT ACCAAATCGTCCAGTACCTCGAGATACTTTTTCTCGACCGGAGCAAATCTCTTCAATTTATATT CCCCAGCCCGCAATTGACGTATAACATAAACACTTCTGTTTATAATTCTGTCACATACAATCAC CGAAGTCATTGGCTATATCTTTTACACTGAGGCACATTTAAAAACTAAATGGAATTAACTTACA TCGCCATGAAAACAAGTAGAGATCAAGAAAATACTAACCGCAGCAATTGATGGAGATGAATCCT CCCCGGCAGGTGGATGGGTCACGTCAGCTCCAAAGATCATTGTAGGCATATCTGTTAACAGAGG AATTCTCCTATGCAAAGCATCTTCCAGTACTGTATTTCGTCCACCAACCTATGTTCAAATTGTT AGTGGAGTGAGCTACTCTCAAATAATAGCCAAATTGTTCGTAAAGCTAAAGAGACAGTGCCCAC GTAATCCATGTACTGTCAAAGTAGTATATCCTACCTTAACATTGATTTTAAGTGCCAGGTTTCG GAGATATTGTGTTGGCGGACATTCTGAACATTCCTAGCTAAACAGCACTGAGTTATCACACCAA GTTCAGTTTCACAAAGCCGCTTTATCCTTCCTGCAGATATTACAGATGTGAGACAACAGATGGT TAGCAAAAACACTGCCAAAAAGAAAAGGTATACCTGAAAAATAATTATCATCAATTTGAGAAGT AATTTATGTGCTTACCATAAAAGACAGTTGCATTTGCATCAGGTAGTACTATTACCAGTAACTC AAGTTGTTGCCCGATCACACCTTGTTGAGAAAGAAATTCTGCAGATTGTCGATGTATATCTCTG ACAGCAGCATCTAAGTGATCTTGGCGTTCTTGCCTAATACGGACACATGGTTCCCCGGTAATTT GCTATGGAAAGGAGGATTATACAATTAAACAAACGTATACATGCCCGAAAGAGGACCATATAGA AAGATAAAATCTTTACCATGCCAATGCTATTGCACACACGAACCAACTCCTTGCAAAACGTCCT AACTTCAGCCAGACGTACGCAGGAAGCAAAAGTCAAGCATGCCCAGTAATTGATGGATCCACCA TTGAGCATCCTCTGAAATATCCACAAACAAAAGAGAATAATTGTTCTCATATCCATTCAAGCAA CTTACAGTAGGTTAAAATAATATGATTTATATAAACAAAAATATAGAAATATTTTTAAAAAATA TATAACACTGTTAATTTTTCCAGAAAACAAGAATTGATCACAGAAGAAGTGGAAACATTACCAT GTTAACCTTTAATCACTAGTACATACAAGTAATTAGATTTGTCACATGAAAAGTAGAATTATCA TAAAAATACTTCTCATTGTATTTTTTTTATTAAGAAACATGCGAGATCATATAATTTAGAAAGA TAATGGACAGGATTGTGTGTGAAACACATCATCAATGTTCAAAACAGAAGGTATATCACATTAT CCTCTCCCAAAATTGAAAATAGATGTGCAATTACATTCTTCTGGGAAAACATAAATAATTGAAA TTTACCACAATTTGACAGTCTAGAATATAGCTCAAAATGAAAAGAATATACCTTGTTATTCATG TTCCACTGACCAATGGAAGGATTACATACTTTCTCTTGTCCAGAGTCATGGTACTTAAGCTAAA AGATAGAAATAGGAAATCCAATGCATAAACAAACGATAATGATATAATTTACCCAAAATAAATA TATTTACCATTGGAGCAGGGAGTACACGAGCATCGACTAAGGCAAGTTGGTTTGTCACCCCGAT GCCAAATTCTCTGGCATGATAATCATTGCCATAGTTGTTTTCATTAGCAAT

			
						 Conservation Information
					
						Conserved circRNAs
						
							NA						
					
						PMCS
						0.096771703

Conservation Information
Conserved circRNAs	NA
PMCS	0.096771703

			
				
						 Functional Information
					

				
						Coding potential
						Y
					

						Potential coding position
						
							27171142-27166934(+)
27171073-27166776(-)
						
					

						Potential amino acid sequence
						
							MIIIAIVVFISNLNARMATKVKVKFTGMAYLSVNNSSR*(+)
MLKYHDSGQEKVCNPSIGQWNMNNKRMLNGGSINYWACLTFASCVRLAEVRTFCKELVRVCNSI
GMQITGEPCVRIRQERQDHLDAAVRDIHRQSAEFLSQQGVIGQQLELLVIVLPDANATVFYGRI
KRLCETELGVITQCCLARNVQNVGGRNTVLEDALHRRIPLLTDMPTMIFGADVTHPPAGEDSSP
SIAAVVASMDWPEVSKYKCSVSSQSHREEIIADLFTEVKDSQNRLVYGGMIRELIESFRKANGS
YKPGRIIFYRDGVSEGQFSQVLLSEMDAIRKACASIEEGYLPPVTFVVVQKRHHTRLFPEDHHA
RDQMDRSRNILPGTVVDTKICHPSEFDFYLCSHSGIQIANENNYGNDYHAREFGIGVTNQLALV
DARVLPAPMLKYHDSGQEKVCNPSIGQWNMNNKRMLNGGSINYWACLTFASCVRLAEVRTFCKE
LVRVCNSIGMQITGEPCVRIRQERQDHLDAAVRDIHRQSAEFLSQQGVIGQQLELLVIVLPDAN
ATVFYGRIKRLCETELGVITQCCLARNVQNVGGRNTVLEDALHRRIPLLTDMPTMIFGADVTHP
PAGEDSSPSIAAVVASMDWPEVSKYKCSVSSQSHREEIIADLFTEVKDSQNRLVYGGMIRELIE
SFRKANGSYKPGRIIFYRDGVSEGQFSQVLLSEMDAIRKACASIEEGYLPPVTFVVVQKRHHTR
LFPEDHHARDQMDRSRNILPGTVVDTKICHPSEFDFYLCSHSGIQIANENNYGNDYHAREFGIG
VTNQLALVDARVLPAPMLKYHDSGQEKVCNPSIGQWNMNNKRMLNGGSINYWACLTFASCVRLA
EVRTFCKELVRVCNSIGMQITGEPCVRIRQERQDHLDAAVRDIHRQSAEFLSQQGVIGQQLELL
VIVLPDANATVFYGRIKRLCETELGVITQCCLARNVQNVGGRNTVLEDALHRRIPLLTDMPTMI
FGADVTHPPAGEDSSPSIAAVVASMDWPEVSKYKCSVSSQSHREEIIADLFTEVKDSQNRLVYG
GMIRELIESFRKANGSYKPGRIIFYRDGVSEGQFSQVLLSEMDAIRKACASIEEGYLPPVTFVV
VQKRHHTRLFPEDHHARDQMDRSRNILPGTVVDTKICHPSEFDFYLCSHSGIQIANENNYGNDY
HAREFGIGVTNQLALVDARVLPAPMLKYHDSGQEKVCNPSIGQWNMNNKRMLNGGSINYWACLT
FASCVRLAEVRTFCKELVRVCNSIGMQITGEPCVRIRQERQDHLDAAVRDIHRQSAEFLSQQGV
IGQQLELLVIVLPDANATVFYGRIKRLCETELGVITQCCLARNVQNVGGRNTVLEDALHRRIPL
LTDMPTMIFGADVTHPPAGEDSSPSIAAVVASMDWPEVSKYKCSVSSQSHREEIIADLFTEVKD
SQNRLVYGGMIRELIESFRKANGSYKPGRIIFYRDGVSEGQFSQVLLSEMDAIRKACASIEEGY
LPPVTFVVVQKRHHTRLFPEDHHARDQMDRSRNILPGTVVDTKICHPSEFDFYLCSHSGIQ(-)
						
					

						Sponge-miRNAs
						
							NA						
					

						circRNA-miRNA-mRNA network
						 VISUALIZATION
					

						Potential function description
						NA
					

			
		

Functional Information
Coding potential	Y
Potential coding position	27171142-27166934(+) 27171073-27166776(-)
Potential amino acid sequence	MIIIAIVVFISNLNARMATKVKVKFTGMAYLSVNNSSR*(+) MLKYHDSGQEKVCNPSIGQWNMNNKRMLNGGSINYWACLTFASCVRLAEVRTFCKELVRVCNSI GMQITGEPCVRIRQERQDHLDAAVRDIHRQSAEFLSQQGVIGQQLELLVIVLPDANATVFYGRI KRLCETELGVITQCCLARNVQNVGGRNTVLEDALHRRIPLLTDMPTMIFGADVTHPPAGEDSSP SIAAVVASMDWPEVSKYKCSVSSQSHREEIIADLFTEVKDSQNRLVYGGMIRELIESFRKANGS YKPGRIIFYRDGVSEGQFSQVLLSEMDAIRKACASIEEGYLPPVTFVVVQKRHHTRLFPEDHHA RDQMDRSRNILPGTVVDTKICHPSEFDFYLCSHSGIQIANENNYGNDYHAREFGIGVTNQLALV DARVLPAPMLKYHDSGQEKVCNPSIGQWNMNNKRMLNGGSINYWACLTFASCVRLAEVRTFCKE LVRVCNSIGMQITGEPCVRIRQERQDHLDAAVRDIHRQSAEFLSQQGVIGQQLELLVIVLPDAN ATVFYGRIKRLCETELGVITQCCLARNVQNVGGRNTVLEDALHRRIPLLTDMPTMIFGADVTHP PAGEDSSPSIAAVVASMDWPEVSKYKCSVSSQSHREEIIADLFTEVKDSQNRLVYGGMIRELIE SFRKANGSYKPGRIIFYRDGVSEGQFSQVLLSEMDAIRKACASIEEGYLPPVTFVVVQKRHHTR LFPEDHHARDQMDRSRNILPGTVVDTKICHPSEFDFYLCSHSGIQIANENNYGNDYHAREFGIG VTNQLALVDARVLPAPMLKYHDSGQEKVCNPSIGQWNMNNKRMLNGGSINYWACLTFASCVRLA EVRTFCKELVRVCNSIGMQITGEPCVRIRQERQDHLDAAVRDIHRQSAEFLSQQGVIGQQLELL VIVLPDANATVFYGRIKRLCETELGVITQCCLARNVQNVGGRNTVLEDALHRRIPLLTDMPTMI FGADVTHPPAGEDSSPSIAAVVASMDWPEVSKYKCSVSSQSHREEIIADLFTEVKDSQNRLVYG GMIRELIESFRKANGSYKPGRIIFYRDGVSEGQFSQVLLSEMDAIRKACASIEEGYLPPVTFVV VQKRHHTRLFPEDHHARDQMDRSRNILPGTVVDTKICHPSEFDFYLCSHSGIQIANENNYGNDY HAREFGIGVTNQLALVDARVLPAPMLKYHDSGQEKVCNPSIGQWNMNNKRMLNGGSINYWACLT FASCVRLAEVRTFCKELVRVCNSIGMQITGEPCVRIRQERQDHLDAAVRDIHRQSAEFLSQQGV IGQQLELLVIVLPDANATVFYGRIKRLCETELGVITQCCLARNVQNVGGRNTVLEDALHRRIPL LTDMPTMIFGADVTHPPAGEDSSPSIAAVVASMDWPEVSKYKCSVSSQSHREEIIADLFTEVKD SQNRLVYGGMIRELIESFRKANGSYKPGRIIFYRDGVSEGQFSQVLLSEMDAIRKACASIEEGY LPPVTFVVVQKRHHTRLFPEDHHARDQMDRSRNILPGTVVDTKICHPSEFDFYLCSHSGIQ(-)
Sponge-miRNAs	NA
circRNA-miRNA-mRNA network	VISUALIZATION
Potential function description	NA

			
						 Other Information
					
						References
						Chu et al., 2017

circRNA

Detail information of Os03g0682600_circ_g.2

Address

Any questions?

Supported by