CircRNA Name |
AT2G07050_circ_g.6 |
ID in PlantcircBase |
ath_circ_012999 |
Alias |
At_ciR1269, AT2G07050_C2 |
Organism |
Arabidpsis thaliana |
Position |
chr2: 2925886-2926524 JBrowse» |
Reference genome |
TAIR10.38 |
Type |
e-circRNA
|
Identification method |
CIRCexplorer, CIRI, KNIFE, PcircRNA_finder, circRNA_finder, find_circ, CIRI2 |
Parent gene |
AT2G07050 |
Parent gene annotation |
Cycloartenol synthase |
Parent gene strand |
+ |
Alternative splicing |
AT2G07050_circ_g.1 AT2G07050_circ_g.2 AT2G07050_circ_g.3 AT2G07050_circ_g.4 AT2G07050_circ_g.5 AT2G07050_circ_g.7 AT2G07050_circ_g.8 AT2G07050_circ_g.9 AT2G07050_circ_g.10 AT2G07050_circ_g.11 AT2G07050_circ_g.12 AT2G07050_circ_g.13 AT2G07050_circ_g.14 AT2G07050_circ_g.15 AT2G07050_circ_g.16 AT2G07050_circ_g.17 |
Support reads |
4/50/2 |
Tissues |
leaf/root, leaf, aerial, inflorescences, seed, whole_plant/seedlings |
Exon boundary |
Yes-Yes
"Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.
|
Splicing signals |
GT-AG
The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.
|
Number of exons covered |
AT2G07050.1:3 AT2G07050.2:3
|