Plant Circular RNA Database

Detail information of Os05g0317200_circ_g.4

			
						 General Information
					
						CircRNA Name
						Os05g0317200_circ_g.4
					
						ID in PlantcircBase
						osa_circ_027414
					
						Alias
						NA
					
						Organism
						
							Oryza sativa						
					
						Position
						
							chr5: 14692987-14697245  JBrowse»						
					
						Reference genome
						
							IRGSP-1.0.38						
					
						Type  
						
							e-circRNA							
									
						Identification method
						CIRCexplorer
					
						Parent gene
						
							Os05g0317200						
					
						Parent gene annotation
						
							AMP-dependent synthetase and ligase domain containing protein. (
Os05t0317200-01)
							
						Parent gene strand
						+
					
						Alternative splicing
						
							Os05g0317200_circ_g.1 Os05g0317200_circ_g.2 Os05g0317200_circ_g.3 Os05g0317200_circ_g.5 Os05g0317200_circ_g.6 Os05g0317200_circ_g.7 Os05g0317200_circ_g.8 Os05g0317200_circ_g.9 Os05g0317200_circ_g.10 Os05g0317200_circ_g.11 						
					
						Support reads
						1
					
						Tissues
						shoot, root
					
						Exon boundary  
						
							Yes-Yes							"Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.

						Splicing signals  
						
							GT-AG							The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.

						Number of exons covered
						Os05t0317200-01:5

General Information
CircRNA Name	Os05g0317200_circ_g.4
ID in PlantcircBase	osa_circ_027414
Alias	NA
Organism	Oryza sativa
Position	chr5: 14692987-14697245 JBrowse»
Reference genome	IRGSP-1.0.38
Type	e-circRNA
Identification method	CIRCexplorer
Parent gene	Os05g0317200
Parent gene annotation	AMP-dependent synthetase and ligase domain containing protein. ( Os05t0317200-01)
Parent gene strand	+
Alternative splicing	Os05g0317200_circ_g.1 Os05g0317200_circ_g.2 Os05g0317200_circ_g.3 Os05g0317200_circ_g.5 Os05g0317200_circ_g.6 Os05g0317200_circ_g.7 Os05g0317200_circ_g.8 Os05g0317200_circ_g.9 Os05g0317200_circ_g.10 Os05g0317200_circ_g.11
Support reads	1
Tissues	shoot, root
Exon boundary	Yes-Yes "Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.
Splicing signals	GT-AG The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.
Number of exons covered	Os05t0317200-01:5

			
						 Experimental Information
					
						Sanger sequencing for BSS  
						
							NA							Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".

						PCR primers for BSS   
						
							NA							PCR primers used in back-splicing site (BSS) validation.

						Sanger sequencing for FL   
						
							NA							Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.

						PCR primers for FL   
						
							NA							 PCR primers used in full-length (FL) sequence validation.

Experimental Information
Sanger sequencing for BSS	NA Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".
PCR primers for BSS	NA PCR primers used in back-splicing site (BSS) validation.
Sanger sequencing for FL	NA Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.
PCR primers for FL	NA PCR primers used in full-length (FL) sequence validation.

			
				
						 Sequences
					

				
						Splice junction sequence  
						
							CTATGGATTGACAGAGACTTGTGCTGGAGCAGCCTTTTCTGAATGGGATGACACAAGTGTGGGC
CGTGTTGGTCCACCCCTTCCTTGTTGCTATGTCAAGacacaggtttcaactctgatatgtgatt
caaagcaacttaagaagctacctgcaatcagttccaagttgcagagtgttaagcatgttatcta
tattgagg

									
								

					

						Assembled circRNA sequence  
						
							Yes
The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).

					

						Full-length trsnacripts
						
							Transcript length: 921
Transcript exons: 14692987-14693253,14694266-14694397,14694481-14694654,14
696224-14696453,14697128-14697245
ACACAGGTTTCAACTCTGATATGTGATTCAAAGCAACTTAAGAAGCTACCTGCAATCAGTTCCA
AGTTGCAGAGTGTTAAGCATGTTATCTATATTGAGGATGAACCTGTTGAGGCTGAGGTACTCAA
TCAAATGAAGCACTGGACAACATTTTCTTTTGGTGAAGTTGAAGAATTGGGTAAAACATCACAT
ACAGATGCAAGATTACCTTCAAGCACTGATACTGCAGTTATTATGTATACAAGTGGAAGTACGG
GTCTTCCCAAGGGTGTAATGATTACACATGGAAATATGGTGGCCACAACTGCAGCTGTCATGAC
AATCATACCAAAACTTGGCACAGGGGATGTTTATCTGGCATACCTTCCGCTGGCTCATGTCTTT
GAACTAGCAGCAGAGACTGTCATGTTAGCTTCTGGTGCTGCCATTGGATATGGCTCAGCTCTGA
CTATGACAGATACATCAAATAAAATAAAGAAGGGGACAAAAGGAGATGTTTCTGCACTGAAGCC
TACTCTTATGATTTCAGTCCCTGCAATTTTAGACCGCATCAGAGATGCCGTGTTTAAAAAGGTT
GGTGAGAAGGGTGGTCTGACCAAAAAGCTGTTTGACATTGCCTATAAACGAAATCTTGGAGCTA
TTGAAGGAAGTTGGTTTGGATCCTGGGCACCAGAGAGGATGATATGGGATAACCTCATTTTTAA
ACCAATACGTTCCATGCTTGGTGGGCGCATTAGATTTGTTCTTTGTGGTGGTGCACCTCTATCG
AGTGACACACAAAGATTTATGAATATATGTCTTGGTGTACCAGTAGGTCAAGGCTATGGATTGA
CAGAGACTTGTGCTGGAGCAGCCTTTTCTGAATGGGATGACACAAGTGTGGGCCGTGTTGGTCC
ACCCCTTCCTTGTTGCTATGTCAAG
						
					

						Genomic sequence
						
							ACACAGGTTTCAACTCTGATATGTGATTCAAAGCAACTTAAGAAGCTACCTGCAATCAGTTCCA
AGTTGCAGAGTGTTAAGCATGTTATCTATATTGAGGATGAACCTGTTGAGGCTGAGGTACTCAA
TCAAATGAAGCACTGGACAACATTTTCTTTTGGTGAAGTTGAAGAATTGGGTAAAACATCACAT
ACAGATGCAAGATTACCTTCAAGCACTGATACTGCAGTTATTATGTATACAAGTGGAAGTACGG
GTCTTCCCAAGGTACACTTGTGCTCAAAGATATTCTGATTTTTTCTGTCATATGCTGTTATCTA
TTTTTATTCATGAAAATAAATAAGGACAAAAGCAGGGGTCATTCTTTCTTGTTCCTCCTTTTCT
TTTTGCTTCATCTGAAGGTGTACACACATGATGAGCCTACCATCCTGTTACTTTCACTGAACAA
GAGCTTAAGTGATGTATGATATAGAGAATTACGATCCTATTAGCCCATTAGCTTGACAGATATT
ATGATAATCTCTTGGGCCTATTCTCAACGTACTCACATAACTTCCTTTTGAACTGATGCTCTCC
ATAATTAAGGGCAACATTGAGAGTTATGATAATATGCAGTTATGCCCATTTAATTTACAAATGA
GAAATAAAGCAGGACATTAAATCCTTTCTACAAATTAAATTCACTTTCCTGATATATACTCTCT
TTTCCTCTCTTCCCCAAAGGAAAGTTGGTTTTTCCTTGGTATTTTTGCAAGTGCAATTACCCAC
TTTGCTTATTGTGGAAGGATAGCAGGGATGGGAACAGGATGAACCAAACTGATCCATCACTGCT
TCATCCACTCCTCACCATCATGTAGAGATCCATGGACTGTTCCAATGTACAATTAAGACCCTCT
ATAACCACTGGATCTCTAGGTTGACTCTAGTATTCAGAGAAAAAAAAAAATAAATTCAGAAACC
ATATGCATTTTGATACGCGAAAAAGGCTCAAATTTGAAATTCATAACGAGAACATCATTTTGCA
CAAACAACTCAAAATTCCTCGGATTAGGAAAAACAGGTATAGATAAAATATATGAATTAACTGT
TCATGAGTGTGACAACGTTCGTCTTTTTGACAAAATGATCAGCATAATGCATATTTTTTTGTGC
AAACTTGAATTACAATCCATTGTGGATCCACAGCTATGTACTTTCATTTATCACAATGTCAACC
ACTTTTGAGTTTGCAGTTCTTGTGTCCTCTTTTAATCCAGTTTTATGGTTTCCTTTGACATAGG
GTGTAATGATTACACATGGAAATATGGTGGCCACAACTGCAGCTGTCATGACAATCATACCAAA
ACTTGGCACAGGGGATGTTTATCTGGCATACCTTCCGCTGGCTCATGTCTTTGAACTAGCAGCA
GAGGTGACATCTTTTGCAATTGAGAGAGATGCCATTATTAAGAACTGTGAATATTTCTATGACA
TATTGTTGTTTTGTTTGGCCAGACTGTCATGTTAGCTTCTGGTGCTGCCATTGGATATGGCTCA
GCTCTGACTATGACAGATACATCAAATAAAATAAAGAAGGGGACAAAAGGAGATGTTTCTGCAC
TGAAGCCTACTCTTATGATTTCAGTCCCTGCAATTTTAGACCGCATCAGAGATGCCGTGTTTAA
AAAGGTTCAAGATTCTCCTCTCATACCATCTATCTCAGTAGTTTACACCATTATCTTTCCATCT
TTGACTAGTTCTGCAATCTTTTATATGCCATTTGCATTCAGCTGCAACATGTCTTTAGAGTGCC
TTTGATGCATTAATCATTTATATGTTTAAATATCTGCCTGTGAATAAACTAAAGAAAAAAGTTT
TGAACCATACAGGTCCTAATATTGTTTTATGTTAAGCGTTATCTGTATGGCCATGTACTTAATT
TCCTTTTCGTTTTAGTAATGTTTGACTGTATTCGCACATGCCACATATACATTGGTCCATCTTG
GACATTTTCATGTCAACTTCTAATTTTTAGAAGGCCAAATAAGAACAAACAACATATGGGATAT
TGAGGTATTGTAATGTAAGGAAATGAAGGCAGCAATTCATAAAAATTGCAGTGCAGAGTTGGTG
AGTGGTGGATTCACAACCACCACAACCTTATTTTTAAAGGAGTGCTACTGCTAGCAATGTGCCC
ACGTATTTCAATGGATGTACATGCCATATGGGATCAGCTAAAACCTAAATACTGCAAACAGTTT
ATATGTCACCACTTATACCTGACCACACAACTTGGTGGGGTATAGAAGAGCACACTATCACCCC
CAATTCAGTATTTTTAAGGAATTAAGATTAGGATATAGATGCACTGTTTGGTTGTCGTTTGCAC
ATCTAGCAGCCTAGCAACTTGTAGATTTTTCTGTACCTTACACCAGGCATATCTTAAAAAAAAA
AATTGATGTTCTGGCTAGCTCAATGGGCAAAGTCAAGTGCAGGCCCCAGCCATTTCTAGCATAG
TATAACATGCATGTTTTTGGTATCATACAACACTACAACCTTCAGTTTTGGTGCACTGCTCTGG
TCTGCATCTCTTATTTCCCAACCCTAGCCATTATAATGCCTACCATACCGTAGCACGCTTCATG
TCTTGTCTAGCATACAAGTCTGAGCTTCGGCTGAGGCTGATAAGCCATAGAAAATGAAGCAACC
GAAAATAATTTTTGGGTTAAACTGTTATACTCCCTCCGTTTTTTAACATATGGCGCTGTTGACA
TTTTGAGATACATTTGACCATTCTTCTTATTAAAAAATATGTAATTATCATTTATTTTATTATG
ATTTGATTTATTGTCAAATGTTCTTTAAGCATGGCTTAAATTTTTTTATATTCGCTCTAAAATT
TTGAATAGGACGAATGATCAAACGTTTATCAAAAAGTTAACGGCATCATATATTAAAAATGGGA
GGTACAAGGCTGGAGAATAGACTATGATGAGAAAACCCCAAATTCAACTCTAAAATTAAGTTTC
AAATTCAAATTGGTTGTGGCTGATAAGCCAACAAGCAGATGATGAAACCGAAGGCTGGAAACAT
GTTTGAAACAATGAGTTTCTGTAGACTTAATATTTTAAATGCATTGCATCAAATGGCATGTATC
ATGCAGGCAGAATTGAACGGTCAAATTTTATGATCATGCACCAAAATATGGTTTAAACATACTT
CTCATCTCAAAACTTAATATTTAAATTATGTTTCCAGGTTGGTGAGAAGGGTGGTCTGACCAAA
AAGCTGTTTGACATTGCCTATAAACGAAATCTTGGAGCTATTGAAGGAAGTTGGTTTGGATCCT
GGGCACCAGAGAGGATGATATGGGATAACCTCATTTTTAAACCAATACGTTCCATGCTTGGTGG
GCGCATTAGATTTGTTCTTTGTGGTGGTGCACCTCTATCGAGTGACACACAAAGATTTATGAAT
ATATGTCTTGGGTAATTTCTTTTGTCCTATTTGGATTATCTTAAATTTAACCATTTGCAATCAG
TGAGATGTCAACTGAAGAAGTATTCTTCCAAAAATTTCCACTGAGTTTATTTGTTGAAGATTGT
GTGCCAGTCGTAGAGCATAGTGTCATTTCTCGGATACTTGAATTATCTTTTTTTTCTTCGAAAA
ATGAGGCTAGAATTACATGAATTCCAAAAACATACAAGGAGTCAACTTTTTTTTTTGTCTTATT
GTACATCTTAAGTTTGTTTAAGACGTTACTAAAAAAAATACTGATTTTAATGAACTTACCTCAT
GGAAAATTCAAGTTCAATGCCATACTCAAGTCCTAGACATTGTTAGAGTGTACGTTTGCAGGTA
GTGCGCTCATCAAACCTTTGGATTTATTTATTTACAGAAAACAAAACATTTGTTGGATAAGCTC
ATAAAATTTGGGCGTGCTACTTATATGTTTTTTTAATTCAAACAGTTTGTCAAAAATCACTTTA
TAGTGAAATTTGTATTTGCACGTTTAGTGAATCAAATGCTGAAAGTTGAAATATTAAACAGAGG
ACCTTTCTAGAGTACATGCACTATGCTATAATGTGATGAGCTTCCTTTTATTGTATGTCGCTGC
ATTTGTTTTTGGTTCTTATGCAGTTTTGAATTACCTGTGCTGCAGTGTACCAGTAGGTCAAGGC
TATGGATTGACAGAGACTTGTGCTGGAGCAGCCTTTTCTGAATGGGATGACACAAGTGTGGGCC
GTGTTGGTCCACCCCTTCCTTGTTGCTATGTCAAG
						
					

			
		

Sequences
Splice junction sequence	CTATGGATTGACAGAGACTTGTGCTGGAGCAGCCTTTTCTGAATGGGATGACACAAGTGTGGGC CGTGTTGGTCCACCCCTTCCTTGTTGCTATGTCAAGacacaggtttcaactctgatatgtgatt caaagcaacttaagaagctacctgcaatcagttccaagttgcagagtgttaagcatgttatcta tattgagg
Assembled circRNA sequence	Yes The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).
Full-length trsnacripts	Transcript length: 921 Transcript exons: 14692987-14693253,14694266-14694397,14694481-14694654,14 696224-14696453,14697128-14697245 ACACAGGTTTCAACTCTGATATGTGATTCAAAGCAACTTAAGAAGCTACCTGCAATCAGTTCCA AGTTGCAGAGTGTTAAGCATGTTATCTATATTGAGGATGAACCTGTTGAGGCTGAGGTACTCAA TCAAATGAAGCACTGGACAACATTTTCTTTTGGTGAAGTTGAAGAATTGGGTAAAACATCACAT ACAGATGCAAGATTACCTTCAAGCACTGATACTGCAGTTATTATGTATACAAGTGGAAGTACGG GTCTTCCCAAGGGTGTAATGATTACACATGGAAATATGGTGGCCACAACTGCAGCTGTCATGAC AATCATACCAAAACTTGGCACAGGGGATGTTTATCTGGCATACCTTCCGCTGGCTCATGTCTTT GAACTAGCAGCAGAGACTGTCATGTTAGCTTCTGGTGCTGCCATTGGATATGGCTCAGCTCTGA CTATGACAGATACATCAAATAAAATAAAGAAGGGGACAAAAGGAGATGTTTCTGCACTGAAGCC TACTCTTATGATTTCAGTCCCTGCAATTTTAGACCGCATCAGAGATGCCGTGTTTAAAAAGGTT GGTGAGAAGGGTGGTCTGACCAAAAAGCTGTTTGACATTGCCTATAAACGAAATCTTGGAGCTA TTGAAGGAAGTTGGTTTGGATCCTGGGCACCAGAGAGGATGATATGGGATAACCTCATTTTTAA ACCAATACGTTCCATGCTTGGTGGGCGCATTAGATTTGTTCTTTGTGGTGGTGCACCTCTATCG AGTGACACACAAAGATTTATGAATATATGTCTTGGTGTACCAGTAGGTCAAGGCTATGGATTGA CAGAGACTTGTGCTGGAGCAGCCTTTTCTGAATGGGATGACACAAGTGTGGGCCGTGTTGGTCC ACCCCTTCCTTGTTGCTATGTCAAG
Genomic sequence	ACACAGGTTTCAACTCTGATATGTGATTCAAAGCAACTTAAGAAGCTACCTGCAATCAGTTCCA AGTTGCAGAGTGTTAAGCATGTTATCTATATTGAGGATGAACCTGTTGAGGCTGAGGTACTCAA TCAAATGAAGCACTGGACAACATTTTCTTTTGGTGAAGTTGAAGAATTGGGTAAAACATCACAT ACAGATGCAAGATTACCTTCAAGCACTGATACTGCAGTTATTATGTATACAAGTGGAAGTACGG GTCTTCCCAAGGTACACTTGTGCTCAAAGATATTCTGATTTTTTCTGTCATATGCTGTTATCTA TTTTTATTCATGAAAATAAATAAGGACAAAAGCAGGGGTCATTCTTTCTTGTTCCTCCTTTTCT TTTTGCTTCATCTGAAGGTGTACACACATGATGAGCCTACCATCCTGTTACTTTCACTGAACAA GAGCTTAAGTGATGTATGATATAGAGAATTACGATCCTATTAGCCCATTAGCTTGACAGATATT ATGATAATCTCTTGGGCCTATTCTCAACGTACTCACATAACTTCCTTTTGAACTGATGCTCTCC ATAATTAAGGGCAACATTGAGAGTTATGATAATATGCAGTTATGCCCATTTAATTTACAAATGA GAAATAAAGCAGGACATTAAATCCTTTCTACAAATTAAATTCACTTTCCTGATATATACTCTCT TTTCCTCTCTTCCCCAAAGGAAAGTTGGTTTTTCCTTGGTATTTTTGCAAGTGCAATTACCCAC TTTGCTTATTGTGGAAGGATAGCAGGGATGGGAACAGGATGAACCAAACTGATCCATCACTGCT TCATCCACTCCTCACCATCATGTAGAGATCCATGGACTGTTCCAATGTACAATTAAGACCCTCT ATAACCACTGGATCTCTAGGTTGACTCTAGTATTCAGAGAAAAAAAAAAATAAATTCAGAAACC ATATGCATTTTGATACGCGAAAAAGGCTCAAATTTGAAATTCATAACGAGAACATCATTTTGCA CAAACAACTCAAAATTCCTCGGATTAGGAAAAACAGGTATAGATAAAATATATGAATTAACTGT TCATGAGTGTGACAACGTTCGTCTTTTTGACAAAATGATCAGCATAATGCATATTTTTTTGTGC AAACTTGAATTACAATCCATTGTGGATCCACAGCTATGTACTTTCATTTATCACAATGTCAACC ACTTTTGAGTTTGCAGTTCTTGTGTCCTCTTTTAATCCAGTTTTATGGTTTCCTTTGACATAGG GTGTAATGATTACACATGGAAATATGGTGGCCACAACTGCAGCTGTCATGACAATCATACCAAA ACTTGGCACAGGGGATGTTTATCTGGCATACCTTCCGCTGGCTCATGTCTTTGAACTAGCAGCA GAGGTGACATCTTTTGCAATTGAGAGAGATGCCATTATTAAGAACTGTGAATATTTCTATGACA TATTGTTGTTTTGTTTGGCCAGACTGTCATGTTAGCTTCTGGTGCTGCCATTGGATATGGCTCA GCTCTGACTATGACAGATACATCAAATAAAATAAAGAAGGGGACAAAAGGAGATGTTTCTGCAC TGAAGCCTACTCTTATGATTTCAGTCCCTGCAATTTTAGACCGCATCAGAGATGCCGTGTTTAA AAAGGTTCAAGATTCTCCTCTCATACCATCTATCTCAGTAGTTTACACCATTATCTTTCCATCT TTGACTAGTTCTGCAATCTTTTATATGCCATTTGCATTCAGCTGCAACATGTCTTTAGAGTGCC TTTGATGCATTAATCATTTATATGTTTAAATATCTGCCTGTGAATAAACTAAAGAAAAAAGTTT TGAACCATACAGGTCCTAATATTGTTTTATGTTAAGCGTTATCTGTATGGCCATGTACTTAATT TCCTTTTCGTTTTAGTAATGTTTGACTGTATTCGCACATGCCACATATACATTGGTCCATCTTG GACATTTTCATGTCAACTTCTAATTTTTAGAAGGCCAAATAAGAACAAACAACATATGGGATAT TGAGGTATTGTAATGTAAGGAAATGAAGGCAGCAATTCATAAAAATTGCAGTGCAGAGTTGGTG AGTGGTGGATTCACAACCACCACAACCTTATTTTTAAAGGAGTGCTACTGCTAGCAATGTGCCC ACGTATTTCAATGGATGTACATGCCATATGGGATCAGCTAAAACCTAAATACTGCAAACAGTTT ATATGTCACCACTTATACCTGACCACACAACTTGGTGGGGTATAGAAGAGCACACTATCACCCC CAATTCAGTATTTTTAAGGAATTAAGATTAGGATATAGATGCACTGTTTGGTTGTCGTTTGCAC ATCTAGCAGCCTAGCAACTTGTAGATTTTTCTGTACCTTACACCAGGCATATCTTAAAAAAAAA AATTGATGTTCTGGCTAGCTCAATGGGCAAAGTCAAGTGCAGGCCCCAGCCATTTCTAGCATAG TATAACATGCATGTTTTTGGTATCATACAACACTACAACCTTCAGTTTTGGTGCACTGCTCTGG TCTGCATCTCTTATTTCCCAACCCTAGCCATTATAATGCCTACCATACCGTAGCACGCTTCATG TCTTGTCTAGCATACAAGTCTGAGCTTCGGCTGAGGCTGATAAGCCATAGAAAATGAAGCAACC GAAAATAATTTTTGGGTTAAACTGTTATACTCCCTCCGTTTTTTAACATATGGCGCTGTTGACA TTTTGAGATACATTTGACCATTCTTCTTATTAAAAAATATGTAATTATCATTTATTTTATTATG ATTTGATTTATTGTCAAATGTTCTTTAAGCATGGCTTAAATTTTTTTATATTCGCTCTAAAATT TTGAATAGGACGAATGATCAAACGTTTATCAAAAAGTTAACGGCATCATATATTAAAAATGGGA GGTACAAGGCTGGAGAATAGACTATGATGAGAAAACCCCAAATTCAACTCTAAAATTAAGTTTC AAATTCAAATTGGTTGTGGCTGATAAGCCAACAAGCAGATGATGAAACCGAAGGCTGGAAACAT GTTTGAAACAATGAGTTTCTGTAGACTTAATATTTTAAATGCATTGCATCAAATGGCATGTATC ATGCAGGCAGAATTGAACGGTCAAATTTTATGATCATGCACCAAAATATGGTTTAAACATACTT CTCATCTCAAAACTTAATATTTAAATTATGTTTCCAGGTTGGTGAGAAGGGTGGTCTGACCAAA AAGCTGTTTGACATTGCCTATAAACGAAATCTTGGAGCTATTGAAGGAAGTTGGTTTGGATCCT GGGCACCAGAGAGGATGATATGGGATAACCTCATTTTTAAACCAATACGTTCCATGCTTGGTGG GCGCATTAGATTTGTTCTTTGTGGTGGTGCACCTCTATCGAGTGACACACAAAGATTTATGAAT ATATGTCTTGGGTAATTTCTTTTGTCCTATTTGGATTATCTTAAATTTAACCATTTGCAATCAG TGAGATGTCAACTGAAGAAGTATTCTTCCAAAAATTTCCACTGAGTTTATTTGTTGAAGATTGT GTGCCAGTCGTAGAGCATAGTGTCATTTCTCGGATACTTGAATTATCTTTTTTTTCTTCGAAAA ATGAGGCTAGAATTACATGAATTCCAAAAACATACAAGGAGTCAACTTTTTTTTTTGTCTTATT GTACATCTTAAGTTTGTTTAAGACGTTACTAAAAAAAATACTGATTTTAATGAACTTACCTCAT GGAAAATTCAAGTTCAATGCCATACTCAAGTCCTAGACATTGTTAGAGTGTACGTTTGCAGGTA GTGCGCTCATCAAACCTTTGGATTTATTTATTTACAGAAAACAAAACATTTGTTGGATAAGCTC ATAAAATTTGGGCGTGCTACTTATATGTTTTTTTAATTCAAACAGTTTGTCAAAAATCACTTTA TAGTGAAATTTGTATTTGCACGTTTAGTGAATCAAATGCTGAAAGTTGAAATATTAAACAGAGG ACCTTTCTAGAGTACATGCACTATGCTATAATGTGATGAGCTTCCTTTTATTGTATGTCGCTGC ATTTGTTTTTGGTTCTTATGCAGTTTTGAATTACCTGTGCTGCAGTGTACCAGTAGGTCAAGGC TATGGATTGACAGAGACTTGTGCTGGAGCAGCCTTTTCTGAATGGGATGACACAAGTGTGGGCC GTGTTGGTCCACCCCTTCCTTGTTGCTATGTCAAG

			
						 Conservation Information
					
						Conserved circRNAs
						
							osi_circ_006153* 						
					
						PMCS
						0.327964676

Conservation Information
Conserved circRNAs	osi_circ_006153*
PMCS	0.327964676

			
						 Functional Information
					
						Coding potential
						Y
					
						Potential coding position
						
							14693120-14697242(+)
14697194-14693002(+)
						
						Potential amino acid sequence
						
							MKHWTTFSFGEVEELGKTSHTDARLPSSTDTAVIMYTSGSTGLPKGVMITHGNMVATTAAVMTI
IPKLGTGDVYLAYLPLAHVFELAAETVMLASGAAIGYGSALTMTDTSNKIKKGTKGDVSALKPT
LMISVPAILDRIRDAVFKKVGEKGGLTKKLFDIAYKRNLGAIEGSWFGSWAPERMIWDNLIFKP
IRSMLGGRIRFVLCGGAPLSSDTQRFMNICLGVPVGQGYGLTETCAGAAFSEWDDTSVGRVGPP
LPCCYVKTQVSTLICDSKQLKKLPAISSKLQSVKHVIYIEDEPVEAEVLNQMKHWTTFSFGEVE
ELGKTSHTDARLPSSTDTAVIMYTSGSTGLPKGVMITHGNMVATTAAVMTIIPKLGTGDVYLAY
LPLAHVFELAAETVMLASGAAIGYGSALTMTDTSNKIKKGTKGDVSALKPTLMISVPAILDRIR
DAVFKKVGEKGGLTKKLFDIAYKRNLGAIEGSWFGSWAPERMIWDNLIFKPIRSMLGGRIRFVL
CGGAPLSSDTQRFMNICLGVPVGQGYGLTETCAGAAFSEWDDTSVGRVGPPLPCCYVKTQVSTL
ICDSKQLKKLPAISSKLQSVKHVIYIEDEPVEAEVLNQMKHWTTFSFGEVEELGKTSHTDARLP
SSTDTAVIMYTSGSTGLPKGVMITHGNMVATTAAVMTIIPKLGTGDVYLAYLPLAHVFELAAET
VMLASGAAIGYGSALTMTDTSNKIKKGTKGDVSALKPTLMISVPAILDRIRDAVFKKVGEKGGL
TKKLFDIAYKRNLGAIEGSWFGSWAPERMIWDNLIFKPIRSMLGGRIRFVLCGGAPLSSDTQRF
MNICLGVPVGQGYGLTETCAGAAFSEWDDTSVGRVGPPLPCCYVKTQVSTLICDSKQLKKLPAI
SSKLQSVKHVIYIEDEPVEAEVLNQMKHWTTFSFGEVEELGKTSHTDARLPSSTDTAVIMYTSG
STGLPKGVMITHGNMVATTAAVMTIIPKLGTGDVYLAYLPLAHVFELAAETVMLASGAAIGYGS
ALTMTDTSNKIKKGTKGDVSALKPTLMISVPAILDRIRDAVFKKVGEKGGLTKKLFDIAYKRNL
GAIEGSWFGSWAPERMIWDNLIFKPIRSMLGGRIRFVLCGGAPLSSDTQRFMNICLGVPVGQGY
GLTETCAGAAFSEWDDTSVGRVGPPLPCCYVK(+)
MTQVWAVLVHPFLVAMSRHRFQL*(+)
						
						Sponge-miRNAs
						
							NA						
					
						circRNA-miRNA-mRNA network
						 VISUALIZATION
					
						Potential function description
						NA

Functional Information
Coding potential	Y
Potential coding position	14693120-14697242(+) 14697194-14693002(+)
Potential amino acid sequence	MKHWTTFSFGEVEELGKTSHTDARLPSSTDTAVIMYTSGSTGLPKGVMITHGNMVATTAAVMTI IPKLGTGDVYLAYLPLAHVFELAAETVMLASGAAIGYGSALTMTDTSNKIKKGTKGDVSALKPT LMISVPAILDRIRDAVFKKVGEKGGLTKKLFDIAYKRNLGAIEGSWFGSWAPERMIWDNLIFKP IRSMLGGRIRFVLCGGAPLSSDTQRFMNICLGVPVGQGYGLTETCAGAAFSEWDDTSVGRVGPP LPCCYVKTQVSTLICDSKQLKKLPAISSKLQSVKHVIYIEDEPVEAEVLNQMKHWTTFSFGEVE ELGKTSHTDARLPSSTDTAVIMYTSGSTGLPKGVMITHGNMVATTAAVMTIIPKLGTGDVYLAY LPLAHVFELAAETVMLASGAAIGYGSALTMTDTSNKIKKGTKGDVSALKPTLMISVPAILDRIR DAVFKKVGEKGGLTKKLFDIAYKRNLGAIEGSWFGSWAPERMIWDNLIFKPIRSMLGGRIRFVL CGGAPLSSDTQRFMNICLGVPVGQGYGLTETCAGAAFSEWDDTSVGRVGPPLPCCYVKTQVSTL ICDSKQLKKLPAISSKLQSVKHVIYIEDEPVEAEVLNQMKHWTTFSFGEVEELGKTSHTDARLP SSTDTAVIMYTSGSTGLPKGVMITHGNMVATTAAVMTIIPKLGTGDVYLAYLPLAHVFELAAET VMLASGAAIGYGSALTMTDTSNKIKKGTKGDVSALKPTLMISVPAILDRIRDAVFKKVGEKGGL TKKLFDIAYKRNLGAIEGSWFGSWAPERMIWDNLIFKPIRSMLGGRIRFVLCGGAPLSSDTQRF MNICLGVPVGQGYGLTETCAGAAFSEWDDTSVGRVGPPLPCCYVKTQVSTLICDSKQLKKLPAI SSKLQSVKHVIYIEDEPVEAEVLNQMKHWTTFSFGEVEELGKTSHTDARLPSSTDTAVIMYTSG STGLPKGVMITHGNMVATTAAVMTIIPKLGTGDVYLAYLPLAHVFELAAETVMLASGAAIGYGS ALTMTDTSNKIKKGTKGDVSALKPTLMISVPAILDRIRDAVFKKVGEKGGLTKKLFDIAYKRNL GAIEGSWFGSWAPERMIWDNLIFKPIRSMLGGRIRFVLCGGAPLSSDTQRFMNICLGVPVGQGY GLTETCAGAAFSEWDDTSVGRVGPPLPCCYVK(+) MTQVWAVLVHPFLVAMSRHRFQL*(+)
Sponge-miRNAs	NA
circRNA-miRNA-mRNA network	VISUALIZATION
Potential function description	NA

			
						 Other Information
					
						References
						Chu et al., 2017

circRNA

Detail information of Os05g0317200_circ_g.4

Address

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