Splice junction sequence |
TGGCCTTATCATAGGATATTGGTTTGTCACCATCCATAAAATCAGACAGGTCCATATCAAAGGT TGGTGCACGATTACTCAATTCAGAACCAAATGATACctcaactcggaagttctcgtatatagga tgtctagtaggagccttcacacagtaagatcgttttgggtcaacagttgttactgcatcattat gatctcca
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Assembled circRNA sequence |
Yes
The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).
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Full-length trsnacripts |
Transcript length: 900 Transcript exons: 2232293-2232458,2232543-2232758,2232873-2232949,2233056- 2233151,2233237-2233280,2233435-2233522,2233805-2233886, 2233961-2234091 CTCAACTCGGAAGTTCTCGTATATAGGATGTCTAGTAGGAGCCTTCACACAGTAAGATCGTTTT GGGTCAACAGTTGTTACTGCATCATTATGATCTCCATACTTCTCCAAAAATGCATCCCCGGTTA TGATCTCTGGAATATCTCTCGCGTAAACAGCTTCATATCTATGAGGTGGTAGGTTGCATAAATA CTCCAGCGACGCTTCAGATTTCAAAAGATCTACACCATGTTCTTCGTATTCATCAGAATTTGTG TTGCCTGATTGAATAGGAGGACAGGAGGGTAATGATTCTGAAAGAAGATCAGATGCAGCACACT TGATCATCTTGCGTCCCATGTAAGTGCCTACCCTTACAGAGCCATAATCAGTCCCACCAACACT ATGTCGTATCCCAGAGTCAAGACCCCAAAATCGAATGTGAGTTGGAATGCTGACCAACTCTTTC ACTTCTGCAGGCTGACAAATCATTGCAAGAAGTTTGTTAGCTTCTCCACAAGCAGATGTCATTT GATCCATTACACCACAAGGTGCTCCAACAATGCGATTCTCAACCTTTTGGCAGAGTATGGCAAG ATCCCGTGGAGGGATATTTAGACCATAGGCAGCAGCAATAGCAGACATACTGGCAACCTCCACT GATGCAGAAGAGGAGACACCTTTACCTTCAGGAACTGATGAAGAAACCAGAATGCTCATGCTGT CTGTGAAGACCACACCTAGCTCGGTCATCAACACAAGGATTGTTCCAGCAACATATGCAGCCCA TTTTTGGGATGGGTCCTGAGAGAAATATTCTTTGGCCTTATCATAGGATATTGGTTTGTCACCA TCCATAAAATCAGACAGGTCCATATCAAAGGTTGGTGCACGATTACTCAATTCAGAACCAAATG ATAC
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Genomic sequence |
CTCAACTCGGAAGTTCTCGTATATAGGATGTCTAGTAGGAGCCTTCACACAGTAAGATCGTTTT GGGTCAACAGTTGTTACTGCATCATTATGATCTCCATACTTCTCCAAAAATGCATCCCCGGTTA TGATCTCTGGAATATCTCTCGCGTAAACAGCTTCATATCTGAAATTTTGCCAAAGTCATAAAAC CTGGCATACACTATGAAGGACCATATAAAATTTGCTGTCAATATCAAGGTAATGAGACCTATGA GGTGGTAGGTTGCATAAATACTCCAGCGACGCTTCAGATTTCAAAAGATCTACACCATGTTCTT CGTATTCATCAGAATTTGTGTTGCCTGATTGAATAGGAGGACAGGAGGGTAATGATTCTGAAAG AAGATCAGATGCAGCACACTTGATCATCTTGCGTCCCATGTAAGTGCCTACCCTTACAGAGCCA TAATCAGTCCCACCAACACTGCATGAACCAAAGAAGATTATGGTTAACTATGCATCCCAACAAT AAAACCAAACCATGCATCCCAACAATAAAACCAATCTTGCAAAAGATATCAATATGGAAAGTAT TTACCTATGTCGTATCCCAGAGTCAAGACCCCAAAATCGAATGTGAGTTGGAATGCTGACCAAC TCTTTCACTTCTGCAGGCTGCAGCAAAATTTGATCAATTAATTATAGAGGAAATGCAAAGTTGG ACTGAGGAATGACTGGGTCTGGTAGCTACTTCCTCCAAGAGCTGGGTACCCTTACTAACCTGAC AAATCATTGCAAGAAGTTTGTTAGCTTCTCCACAAGCAGATGTCATTTGATCCATTACACCACA AGGTGCTCCAACAATGCGATTCTCAACCTGCATAGTCACCAAAGAATGACTCTCTGCAATAGAA GACCTACCACATTCTGAAGCTATATCCCTTCATTTATTAGTACTTTACCTTTTGGCAGAGTATG GCAAGATCCCGTGGAGGGATATTTAGACCTGAAGCCAAGACAAGAACATGAATTGATGTCAACT AGCACGCCCAGTTAAGTTAAATGTGCAACAGTGGTGGCTGCTGCAGAACTAGATATCCAACCAA AAGAAAGAAAATAGTGGCATTATTACAACAAAGATGTTCAAGTCAATCGTTTACCATAGGCAGC AGCAATAGCAGACATACTGGCAACCTCCACTGATGCAGAAGAGGAGACACCTTTACCTTCAGGA ACTGATGAAGAAACCTGAGGATTCAAATAAAATTATCATGAATGACCAATACAAACATTCGAGT TAGAACACTTGATTGATTAGAATGTGGAAGGAAACACTTGATTGATTAGAATGTGGAAGGAGAA AGTGTGAAAGATGCTGTTTTCTTTTTGTGACTAATAAACAATATTCCTTTTGAGTTCTGAATAT CTCTTTATCTCCCCAATATGAGAAAGGTGACAAACTGGACAAAGAGGTGGAATTTTACATATAT TACTGCATTCTGATTGAAAACAGAAAGGATCAAAGCTTACCAGAATGCTCATGCTGTCTGTGAA GACCACACCTAGCTCGGTCATCAACACAAGGATTGTTCCAGCAACATATGCAGCCCATCTGAAC CAGAACCAAGAATGAATATGCATGACAAGTTATGATTTTTATAGAGTAAAACAAACGATCTTTC TTACTTTTGGGATGGGTCCTGAGAGAAATATTCTTTGGCCTTATCATAGGATATTGGTTTGTCA CCATCCATAAAATCAGACAGGTCCATATCAAAGGTTGGTGCACGATTACTCAATTCAGAACCAA ATGATAC |