Plant Circular RNA Database

Detail information of Os02g0142450_circ_g.2

			
						 General Information
					
						CircRNA Name
						Os02g0142450_circ_g.2
					
						ID in PlantcircBase
						osa_circ_013102
					
						Alias
						NA
					
						Organism
						
							Oryza sativa						
					
						Position
						
							chr2: 2337700-2340719  JBrowse»						
					
						Reference genome
						
							IRGSP-1.0.38						
					
						Type  
						
							u-circRNA							
									
						Identification method
						CIRCexplorer
					
						Parent gene
						
							Os02g0142450						
					
						Parent gene annotation
						
							Hypothetical gene. (Os02t0142450-01)
							
						Parent gene strand
						-
					
						Alternative splicing
						
							Os02g0141300_circ_g.1 Os02g0141300_circ_igg.1 Os02g0141300_circ_g.2 Os02g0141300_circ_g.3 Os02g0141300_circ_g.4 Os02g0141300_circ_g.5 Os02g0141300_circ_g.6 Os02g0141300_circ_g.7 Os02g0142250_circ_ag.1 Os02g0142300_circ_g.1 Os02g0142450_circ_g.1 Os02g0142450_circ_g.3 Os02g0142500_circ_igg.1 Os02g0142500_circ_ag.1 Os02g0142500_circ_ag.2 Os02g0143100_circ_g.1 Os02g0143100_circ_g.2 Os02g0143100_circ_g.3 Os02g0143100_circ_g.4 Os02g0143100_circ_g.5 Os02g0143100_circ_g.6 Os02g0143100_circ_g.7 Os02g0143200_circ_g.1 Os02g0143200_circ_g.2 Os02g0145000_circ_g.1 EPlOSAG00000039494_circ_ig.1 EPlOSAG00000039494_circ_ig.2 ENSRNA049472287_circ_ig.1 Os02g0146500_circ_g.1 Os02g0146500_circ_g.2 Os02g0146600_circ_g.1 Os02g0146600_circ_g.2 Os02g0146600_circ_g.3 Os02g0146700_circ_g.1 Os02g0146700_circ_g.2 Os02g0146700_circ_g.3 Os02g0146700_circ_g.4 Os02g0146700_circ_g.5 Os02g0146900_circ_g.1 Os02g0147100_circ_ag.1 Os02g0147100_circ_ag.2 Os02g0147100_circ_ag.3 Os02g0147100_circ_ag.4 Os02g0147100_circ_ag.5 Os02g0147700_circ_igg.1 Os02g0147700_circ_igg.2 						
					
						Support reads
						1
					
						Tissues
						shoot
					
						Exon boundary  
						
							Yes-Yes							"Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.

						Splicing signals  
						
							GT-AG							The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.

						Number of exons covered
						Os02t0142450-01:6

General Information
CircRNA Name	Os02g0142450_circ_g.2
ID in PlantcircBase	osa_circ_013102
Alias	NA
Organism	Oryza sativa
Position	chr2: 2337700-2340719 JBrowse»
Reference genome	IRGSP-1.0.38
Type	u-circRNA
Identification method	CIRCexplorer
Parent gene	Os02g0142450
Parent gene annotation	Hypothetical gene. (Os02t0142450-01)
Parent gene strand	-
Alternative splicing	Os02g0141300_circ_g.1 Os02g0141300_circ_igg.1 Os02g0141300_circ_g.2 Os02g0141300_circ_g.3 Os02g0141300_circ_g.4 Os02g0141300_circ_g.5 Os02g0141300_circ_g.6 Os02g0141300_circ_g.7 Os02g0142250_circ_ag.1 Os02g0142300_circ_g.1 Os02g0142450_circ_g.1 Os02g0142450_circ_g.3 Os02g0142500_circ_igg.1 Os02g0142500_circ_ag.1 Os02g0142500_circ_ag.2 Os02g0143100_circ_g.1 Os02g0143100_circ_g.2 Os02g0143100_circ_g.3 Os02g0143100_circ_g.4 Os02g0143100_circ_g.5 Os02g0143100_circ_g.6 Os02g0143100_circ_g.7 Os02g0143200_circ_g.1 Os02g0143200_circ_g.2 Os02g0145000_circ_g.1 EPlOSAG00000039494_circ_ig.1 EPlOSAG00000039494_circ_ig.2 ENSRNA049472287_circ_ig.1 Os02g0146500_circ_g.1 Os02g0146500_circ_g.2 Os02g0146600_circ_g.1 Os02g0146600_circ_g.2 Os02g0146600_circ_g.3 Os02g0146700_circ_g.1 Os02g0146700_circ_g.2 Os02g0146700_circ_g.3 Os02g0146700_circ_g.4 Os02g0146700_circ_g.5 Os02g0146900_circ_g.1 Os02g0147100_circ_ag.1 Os02g0147100_circ_ag.2 Os02g0147100_circ_ag.3 Os02g0147100_circ_ag.4 Os02g0147100_circ_ag.5 Os02g0147700_circ_igg.1 Os02g0147700_circ_igg.2
Support reads	1
Tissues	shoot
Exon boundary	Yes-Yes "Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.
Splicing signals	GT-AG The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.
Number of exons covered	Os02t0142450-01:6

			
						 Experimental Information
					
						Sanger sequencing for BSS  
						
							NA							Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".

						PCR primers for BSS   
						
							NA							PCR primers used in back-splicing site (BSS) validation.

						Sanger sequencing for FL   
						
							NA							Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.

						PCR primers for FL   
						
							NA							 PCR primers used in full-length (FL) sequence validation.

Experimental Information
Sanger sequencing for BSS	NA Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".
PCR primers for BSS	NA PCR primers used in back-splicing site (BSS) validation.
Sanger sequencing for FL	NA Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.
PCR primers for FL	NA PCR primers used in full-length (FL) sequence validation.

			
				
						 Sequences
					

				
						Splice junction sequence  
						
							TTCATCTCAATGGATTTTGCCTTCTGGTGCTTGCACGTGATGAAGCAAACATTGTCCTGAAAGA
ATCCAAGGTTCATGAAGCTATCCGATGCTTCTTCAGgagcagacattcggttttatttcatcta
tgtttttgcggaggctacttcaaccaggagtgaatcacagttctgctctacgtgaaaccttgtt
ggagcaca

									
								

					

						Assembled circRNA sequence  
						
							Yes
The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).

					

						Full-length trsnacripts
						
							Transcript length: 1559
Transcript exons: 2337700-2337882,2337989-2338181,2338279-2338847,2339252-
2339414,2340157-2340419,2340532-2340719
GAGCAGACATTCGGTTTTATTTCATCTATGTTTTTGCGGAGGCTACTTCAACCAGGAGTGAATC
ACAGTTCTGCTCTACGTGAAACCTTGTTGGAGCACAAGAGATTTCTATCCGATTCTTATTTCCA
ATCACTTACAACTAGTGGACTACGGAAAGAAATATTATCCACCATAGAACAAGAGGGAAGTTCA
CAGACTGCAAGTTCGACTGCTTATCATTGGAAAAAGTTTTCTGCACGGTATCTCCACAATTGGT
GCTGGAACAATAGGCCATATGGGTTACTTCTTGATACTAACAGAGAAGTTTTTGGTTTAATAAG
AAAGGGTTCATTTTCTCTCTTCCGTTGTTTGGAGGGCATGGAGCAGTTTATTTATGGTTCCTCT
GATGACCTGCGCAATCTTGATATCCTTGGGGTGAACCCATCGGATAATATATCTCAGTCTGAAA
TCCTCATTGAAGTTCTAAGGTGCATGGATCATATAAGCCATCTGCTGGGGAGATCTGCTGCTGC
AATATATCATGAATCCCTCATCAGTTCTGTTATATCACCTGATGAAATTGTTTCTCAGATCTTA
AAGATTCTGGGCACTGGTTTCAGTCCTCAGTCTCCCTCAGCCCTCATTACATTATTTGGAACAG
ATGCTTATGCAGAAAGAAGGCAGACCGCTCACAAGAGTCAGAGGAAGTTTTCTGTTGAAATGTT
ACTATCTTTTCGTAAATTGCAATCAAAGTCGACATCCTGGTCAGCAGTATTTGATGTGATTGAG
AACTTCATGAAGTATTTGAACACAAACGTGACCATCCAAGAGTATGAGCTGAAGAGAGTTTGCA
ATGTGAATACTGCGTTATTGGTTCAAGCTACTTCACAGGTAGCAAGAACAATGTTCGAGTCCAC
TTTTGATCTATATCTGTTCCTCAATTATCTGGTCTCCATTGGTGGGCAGGTCTCCTTGTCACAA
AATGATATTGCCAGAATAAAACTGAAGTTGTTCCCAGTGATTCAAGATATACTGGGACAGTGGA
TTGTCCTCCACTTTGTAGGAATTTCACCTACTACACCACCAACTATTGAGGATTTCAGCTATCA
GCTTTCTTCTCTCCAGCTAGGAAAAGCTGATGACCTGTCTTTGCACAGAAAGTTTGGCTGCTCT
TATTTTACATTGGCTTGTTTACTTGATTTTCCAAAATCTGCTGACGGGGATGTTCTCTCACCCT
GGTTTCCTAATCCAACTGAGTTGGTCAACTTGGTAAGGAGGTTTAGTGGCTCAATTATGAGTGA
AAATATTGCTGGAAATGCTGACTGTTTCTTGAGTTCCACAATTAATCTGGCAGCAGTTCTTGTT
CGCCATGGTCAATATGAAGCTGCTCAGAGTCTTCTGGGCATTCTCGACACACACATGAACTATG
TGAAAGCATCTCAAGCTGACCAGGATACAGATCTTGCACGCTCATCATGCCTTCATCTCAATGG
ATTTTGCCTTCTGGTGCTTGCACGTGATGAAGCAAACATTGTCCTGAAAGAATCCAAGGTTCAT
GAAGCTATCCGATGCTTCTTCAG
						
					

						Genomic sequence
						
							GAGCAGACATTCGGTTTTATTTCATCTATGTTTTTGCGGAGGCTACTTCAACCAGGAGTGAATC
ACAGTTCTGCTCTACGTGAAACCTTGTTGGAGCACAAGAGATTTCTATCCGATTCTTATTTCCA
ATCACTTACAACTAGTGGACTACGGAAAGAAATATTATCCACCATAGAACAAGAGGTGGTTTCC
CTTTTCTTTTTACTCATTTCTTTGTTTCTATCAGGCTTCATGATTTCTAGTTCTAGCATGTGGC
TTGACTGAATTTTCATATATCTCATTCTTTTAGGGAAGTTCACAGACTGCAAGTTCGACTGCTT
ATCATTGGAAAAAGTTTTCTGCACGGTATCTCCACAATTGGTGCTGGAACAATAGGCCATATGG
GTTACTTCTTGATACTAACAGAGAAGTTTTTGGTTTAATAAGAAAGGGTTCATTTTCTCTCTTC
CGTTGTTTGGAGGGCATGGAGCAGTTTATTTATGGTTTGTTACCTTTTTCTAGTATTTAATAAT
TATATTAAAATTATTTTCAACTATCATTATGAGCTATTCGGTAACGCCTATGAGCATTATACAT
CAGGTTCCTCTGATGACCTGCGCAATCTTGATATCCTTGGGGTGAACCCATCGGATAATATATC
TCAGTCTGAAATCCTCATTGAAGTTCTAAGGTGCATGGATCATATAAGCCATCTGCTGGGGAGA
TCTGCTGCTGCAATATATCATGAATCCCTCATCAGTTCTGTTATATCACCTGATGAAATTGTTT
CTCAGATCTTAAAGATTCTGGGCACTGGTTTCAGTCCTCAGTCTCCCTCAGCCCTCATTACATT
ATTTGGAACAGATGCTTATGCAGAAAGAAGGCAGACCGCTCACAAGAGTCAGAGGAAGTTTTCT
GTTGAAATGTTACTATCTTTTCGTAAATTGCAATCAAAGTCGACATCCTGGTCAGCAGTATTTG
ATGTGATTGAGAACTTCATGAAGTATTTGAACACAAACGTGACCATCCAAGAGTATGAGCTGAA
GAGAGTTTGCAATGTGAATACTGCGTTATTGGTTCAAGCTACTTCACAGGTAGCAAGAACAATG
TTCGAGTCCACTTTTGATCTATATCTGTTCCTCAATTATCTGGTCTCCATTGGTGGGCAGGTAT
GCCATATTTTTGTATTTTGATATTTCTGTCTGATGTGCATGTGTTTACTTAACTCGGCCACTGT
GCTACCTCTGATACGTACTGCTATATAGTTCAATATTATATTTCTTTTAGGGAAGTTCACAGAC
TGCTAGTTCGACTGCCATGCTATTACTCAAACTTGCTCCGGTTGGTCAGAACTGGCTAGGACAT
CTGCAAATACTGATTAAGATGTTAAAGTGTTCTTGACTTGCATCAATTGGAAGATAGTAGACAT
ATAACCATAAGATCCTTGTCAGACCTTTGTGTTGTTTGTGGTGTTAAACTGTAATTCAATGCTT
CTTCATAGATACACACTATTCTTGACTGGTAAACGTCTTTCTTTTATCTGTTTCATTAATAAGA
ACAATGTCCAAATCAGGTCTCCTTGTCACAAAATGATATTGCCAGAATAAAACTGAAGTTGTTC
CCAGTGATTCAAGATATACTGGGACAGTGGATTGTCCTCCACTTTGTAGGAATTTCACCTACTA
CACCACCAACTATTGAGGATTTCAGCTATCAGCTTTCTTCTCTCCAGCTAGGTCAGAACTTACA
GTACATTTTGTTGCTCTCTTACTTTTACTTTTGTTCTTTGATATGTATTCTCTTGAATGGGGAC
CCTTCCTCTACAGTATGTTTCCCGCTGTATTATGACAAGGCAACGAGTCCATACAGATAAAAAC
TGATATGCCAATGTTGGGAATAATTAACTATTTGCCACTCTTACGAGTGGTTCTAAAGGATTTG
CCACTGGACCCACATGTTGGTATGCTGTATTCAATAATGGCTTAAATGGAAAGTGGGTGCACAT
GATACTTGTCTCATTAGAGACTAAAATCACTAGATCAATTCATCTTCAATTGCTTAATTGCTAA
TGTATCATGTTACCCATTTCATGGGAATGGCTTGACTTGACCCCTAAGAAACAATCTGTATCTC
TAAGTTAGTTTGTTTCTAATATATGGAATGTATCTACATGGAGGAACTCAACTAAACAATGAAA
CTAATTATTATTTTTATCTCTTATTGCCAAGTAATAGCATGGCAGGAGGCCCATGGGAACAGTG
CACTGCGGCCACAGGGTACTGTTCACACGAAAATTTTCTGCACTTGCCATGGGTCTGGGTGCAC
CACAAATGATTCTAAAATCTAAATGCAATGCACACCTAGCCTCTTATGATATATGGGATCTTAT
ATTCACACTTGGCTTAATATTTATAATGCCACTTTCTTGTGCTTTTCTTGATAAAGAAAGAACA
CGTCCTCATTACTTCATTCTCACAGGAAAAGCTGATGACCTGTCTTTGCACAGAAAGTTTGGCT
GCTCTTATTTTACATTGGCTTGTTTACTTGATTTTCCAAAATCTGCTGACGGGGATGTTCTCTC
ACCCTGGTTTCCTAATCCAACTGAGTTGGTCAACTTGGTAAGGAGGTTTAGTGGCTCAATTATG
AGTGAAAATATTGCTGGAAATGCTGACTGTTTCTTGAGTTCCACAATTAATCTGGCAGCAGTTC
TTGTTCGCCATGGTCAATATGAAGCTGCTCAGGTATCTTTCTTGTTGGTGCCCCTTAAATTCAT
TAAACGTTTATTGTTTGATGTGGTTCTACCATTCTATTTACAATAAATATGACAACCATTATCC
TTATTTCTTCTGAAAGAGTCTTCTGGGCATTCTCGACACACACATGAACTATGTGAAAGCATCT
CAAGCTGACCAGGATACAGATCTTGCACGCTCATCATGCCTTCATCTCAATGGATTTTGCCTTC
TGGTGCTTGCACGTGATGAAGCAAACATTGTCCTGAAAGAATCCAAGGTTCATGAAGCTATCCG
ATGCTTCTTCAG
						
					

			
		

Sequences
Splice junction sequence	TTCATCTCAATGGATTTTGCCTTCTGGTGCTTGCACGTGATGAAGCAAACATTGTCCTGAAAGA ATCCAAGGTTCATGAAGCTATCCGATGCTTCTTCAGgagcagacattcggttttatttcatcta tgtttttgcggaggctacttcaaccaggagtgaatcacagttctgctctacgtgaaaccttgtt ggagcaca
Assembled circRNA sequence	Yes The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).
Full-length trsnacripts	Transcript length: 1559 Transcript exons: 2337700-2337882,2337989-2338181,2338279-2338847,2339252- 2339414,2340157-2340419,2340532-2340719 GAGCAGACATTCGGTTTTATTTCATCTATGTTTTTGCGGAGGCTACTTCAACCAGGAGTGAATC ACAGTTCTGCTCTACGTGAAACCTTGTTGGAGCACAAGAGATTTCTATCCGATTCTTATTTCCA ATCACTTACAACTAGTGGACTACGGAAAGAAATATTATCCACCATAGAACAAGAGGGAAGTTCA CAGACTGCAAGTTCGACTGCTTATCATTGGAAAAAGTTTTCTGCACGGTATCTCCACAATTGGT GCTGGAACAATAGGCCATATGGGTTACTTCTTGATACTAACAGAGAAGTTTTTGGTTTAATAAG AAAGGGTTCATTTTCTCTCTTCCGTTGTTTGGAGGGCATGGAGCAGTTTATTTATGGTTCCTCT GATGACCTGCGCAATCTTGATATCCTTGGGGTGAACCCATCGGATAATATATCTCAGTCTGAAA TCCTCATTGAAGTTCTAAGGTGCATGGATCATATAAGCCATCTGCTGGGGAGATCTGCTGCTGC AATATATCATGAATCCCTCATCAGTTCTGTTATATCACCTGATGAAATTGTTTCTCAGATCTTA AAGATTCTGGGCACTGGTTTCAGTCCTCAGTCTCCCTCAGCCCTCATTACATTATTTGGAACAG ATGCTTATGCAGAAAGAAGGCAGACCGCTCACAAGAGTCAGAGGAAGTTTTCTGTTGAAATGTT ACTATCTTTTCGTAAATTGCAATCAAAGTCGACATCCTGGTCAGCAGTATTTGATGTGATTGAG AACTTCATGAAGTATTTGAACACAAACGTGACCATCCAAGAGTATGAGCTGAAGAGAGTTTGCA ATGTGAATACTGCGTTATTGGTTCAAGCTACTTCACAGGTAGCAAGAACAATGTTCGAGTCCAC TTTTGATCTATATCTGTTCCTCAATTATCTGGTCTCCATTGGTGGGCAGGTCTCCTTGTCACAA AATGATATTGCCAGAATAAAACTGAAGTTGTTCCCAGTGATTCAAGATATACTGGGACAGTGGA TTGTCCTCCACTTTGTAGGAATTTCACCTACTACACCACCAACTATTGAGGATTTCAGCTATCA GCTTTCTTCTCTCCAGCTAGGAAAAGCTGATGACCTGTCTTTGCACAGAAAGTTTGGCTGCTCT TATTTTACATTGGCTTGTTTACTTGATTTTCCAAAATCTGCTGACGGGGATGTTCTCTCACCCT GGTTTCCTAATCCAACTGAGTTGGTCAACTTGGTAAGGAGGTTTAGTGGCTCAATTATGAGTGA AAATATTGCTGGAAATGCTGACTGTTTCTTGAGTTCCACAATTAATCTGGCAGCAGTTCTTGTT CGCCATGGTCAATATGAAGCTGCTCAGAGTCTTCTGGGCATTCTCGACACACACATGAACTATG TGAAAGCATCTCAAGCTGACCAGGATACAGATCTTGCACGCTCATCATGCCTTCATCTCAATGG ATTTTGCCTTCTGGTGCTTGCACGTGATGAAGCAAACATTGTCCTGAAAGAATCCAAGGTTCAT GAAGCTATCCGATGCTTCTTCAG
Genomic sequence	GAGCAGACATTCGGTTTTATTTCATCTATGTTTTTGCGGAGGCTACTTCAACCAGGAGTGAATC ACAGTTCTGCTCTACGTGAAACCTTGTTGGAGCACAAGAGATTTCTATCCGATTCTTATTTCCA ATCACTTACAACTAGTGGACTACGGAAAGAAATATTATCCACCATAGAACAAGAGGTGGTTTCC CTTTTCTTTTTACTCATTTCTTTGTTTCTATCAGGCTTCATGATTTCTAGTTCTAGCATGTGGC TTGACTGAATTTTCATATATCTCATTCTTTTAGGGAAGTTCACAGACTGCAAGTTCGACTGCTT ATCATTGGAAAAAGTTTTCTGCACGGTATCTCCACAATTGGTGCTGGAACAATAGGCCATATGG GTTACTTCTTGATACTAACAGAGAAGTTTTTGGTTTAATAAGAAAGGGTTCATTTTCTCTCTTC CGTTGTTTGGAGGGCATGGAGCAGTTTATTTATGGTTTGTTACCTTTTTCTAGTATTTAATAAT TATATTAAAATTATTTTCAACTATCATTATGAGCTATTCGGTAACGCCTATGAGCATTATACAT CAGGTTCCTCTGATGACCTGCGCAATCTTGATATCCTTGGGGTGAACCCATCGGATAATATATC TCAGTCTGAAATCCTCATTGAAGTTCTAAGGTGCATGGATCATATAAGCCATCTGCTGGGGAGA TCTGCTGCTGCAATATATCATGAATCCCTCATCAGTTCTGTTATATCACCTGATGAAATTGTTT CTCAGATCTTAAAGATTCTGGGCACTGGTTTCAGTCCTCAGTCTCCCTCAGCCCTCATTACATT ATTTGGAACAGATGCTTATGCAGAAAGAAGGCAGACCGCTCACAAGAGTCAGAGGAAGTTTTCT GTTGAAATGTTACTATCTTTTCGTAAATTGCAATCAAAGTCGACATCCTGGTCAGCAGTATTTG ATGTGATTGAGAACTTCATGAAGTATTTGAACACAAACGTGACCATCCAAGAGTATGAGCTGAA GAGAGTTTGCAATGTGAATACTGCGTTATTGGTTCAAGCTACTTCACAGGTAGCAAGAACAATG TTCGAGTCCACTTTTGATCTATATCTGTTCCTCAATTATCTGGTCTCCATTGGTGGGCAGGTAT GCCATATTTTTGTATTTTGATATTTCTGTCTGATGTGCATGTGTTTACTTAACTCGGCCACTGT GCTACCTCTGATACGTACTGCTATATAGTTCAATATTATATTTCTTTTAGGGAAGTTCACAGAC TGCTAGTTCGACTGCCATGCTATTACTCAAACTTGCTCCGGTTGGTCAGAACTGGCTAGGACAT CTGCAAATACTGATTAAGATGTTAAAGTGTTCTTGACTTGCATCAATTGGAAGATAGTAGACAT ATAACCATAAGATCCTTGTCAGACCTTTGTGTTGTTTGTGGTGTTAAACTGTAATTCAATGCTT CTTCATAGATACACACTATTCTTGACTGGTAAACGTCTTTCTTTTATCTGTTTCATTAATAAGA ACAATGTCCAAATCAGGTCTCCTTGTCACAAAATGATATTGCCAGAATAAAACTGAAGTTGTTC CCAGTGATTCAAGATATACTGGGACAGTGGATTGTCCTCCACTTTGTAGGAATTTCACCTACTA CACCACCAACTATTGAGGATTTCAGCTATCAGCTTTCTTCTCTCCAGCTAGGTCAGAACTTACA GTACATTTTGTTGCTCTCTTACTTTTACTTTTGTTCTTTGATATGTATTCTCTTGAATGGGGAC CCTTCCTCTACAGTATGTTTCCCGCTGTATTATGACAAGGCAACGAGTCCATACAGATAAAAAC TGATATGCCAATGTTGGGAATAATTAACTATTTGCCACTCTTACGAGTGGTTCTAAAGGATTTG CCACTGGACCCACATGTTGGTATGCTGTATTCAATAATGGCTTAAATGGAAAGTGGGTGCACAT GATACTTGTCTCATTAGAGACTAAAATCACTAGATCAATTCATCTTCAATTGCTTAATTGCTAA TGTATCATGTTACCCATTTCATGGGAATGGCTTGACTTGACCCCTAAGAAACAATCTGTATCTC TAAGTTAGTTTGTTTCTAATATATGGAATGTATCTACATGGAGGAACTCAACTAAACAATGAAA CTAATTATTATTTTTATCTCTTATTGCCAAGTAATAGCATGGCAGGAGGCCCATGGGAACAGTG CACTGCGGCCACAGGGTACTGTTCACACGAAAATTTTCTGCACTTGCCATGGGTCTGGGTGCAC CACAAATGATTCTAAAATCTAAATGCAATGCACACCTAGCCTCTTATGATATATGGGATCTTAT ATTCACACTTGGCTTAATATTTATAATGCCACTTTCTTGTGCTTTTCTTGATAAAGAAAGAACA CGTCCTCATTACTTCATTCTCACAGGAAAAGCTGATGACCTGTCTTTGCACAGAAAGTTTGGCT GCTCTTATTTTACATTGGCTTGTTTACTTGATTTTCCAAAATCTGCTGACGGGGATGTTCTCTC ACCCTGGTTTCCTAATCCAACTGAGTTGGTCAACTTGGTAAGGAGGTTTAGTGGCTCAATTATG AGTGAAAATATTGCTGGAAATGCTGACTGTTTCTTGAGTTCCACAATTAATCTGGCAGCAGTTC TTGTTCGCCATGGTCAATATGAAGCTGCTCAGGTATCTTTCTTGTTGGTGCCCCTTAAATTCAT TAAACGTTTATTGTTTGATGTGGTTCTACCATTCTATTTACAATAAATATGACAACCATTATCC TTATTTCTTCTGAAAGAGTCTTCTGGGCATTCTCGACACACACATGAACTATGTGAAAGCATCT CAAGCTGACCAGGATACAGATCTTGCACGCTCATCATGCCTTCATCTCAATGGATTTTGCCTTC TGGTGCTTGCACGTGATGAAGCAAACATTGTCCTGAAAGAATCCAAGGTTCATGAAGCTATCCG ATGCTTCTTCAG

			
						 Conservation Information
					
						Conserved circRNAs
						
							NA						
					
						PMCS
						0.237355411

Conservation Information
Conserved circRNAs	NA
PMCS	0.237355411

			
				
						 Functional Information
					

				
						Coding potential
						Y
					

						Potential coding position
						
							2337728-2337757(+)
2340696-2337779(+)
2340709-2337757(+)
2337711-2340615(-)
						
					

						Potential amino acid sequence
						
							MFLRRLLQPGVNHSSALRETLLEHKRFLSDSYFQSLTTSGLRKEILSTIEQEGSSQTASSTAYH
WKKFSARYLHNWCWNNRPYGLLLDTNREVFGLIRKGSFSLFRCLEGMEQFIYGSSDDLRNLDIL
GVNPSDNISQSEILIEVLRCMDHISHLLGRSAAAIYHESLISSVISPDEIVSQILKILGTGFSP
QSPSALITLFGTDAYAERRQTAHKSQRKFSVEMLLSFRKLQSKSTSWSAVFDVIENFMKYLNTN
VTIQEYELKRVCNVNTALLVQATSQVARTMFESTFDLYLFLNYLVSIGGQVSLSQNDIARIKLK
LFPVIQDILGQWIVLHFVGISPTTPPTIEDFSYQLSSLQLGKADDLSLHRKFGCSYFTLACLLD
FPKSADGDVLSPWFPNPTELVNLVRRFSGSIMSENIAGNADCFLSSTINLAAVLVRHGQYEAAQ
SLLGILDTHMNYVKASQADQDTDLARSSCLHLNGFCLLVLARDEANIVLKESKVHEAIRCFFRS
RHSVLFHLCFCGGYFNQE*(+)
MKLSDASSGADIRFYFIYVFAEATSTRSESQFCST*(+)
MLLQEQTFGFISSMFLRRLLQPGVNHSSALRETLLEHKRFLSDSYFQSLTTSGLRKEILSTIEQ
EGSSQTASSTAYHWKKFSARYLHNWCWNNRPYGLLLDTNREVFGLIRKGSFSLFRCLEGMEQFI
YGSSDDLRNLDILGVNPSDNISQSEILIEVLRCMDHISHLLGRSAAAIYHESLISSVISPDEIV
SQILKILGTGFSPQSPSALITLFGTDAYAERRQTAHKSQRKFSVEMLLSFRKLQSKSTSWSAVF
DVIENFMKYLNTNVTIQEYELKRVCNVNTALLVQATSQVARTMFESTFDLYLFLNYLVSIGGQV
SLSQNDIARIKLKLFPVIQDILGQWIVLHFVGISPTTPPTIEDFSYQLSSLQLGKADDLSLHRK
FGCSYFTLACLLDFPKSADGDVLSPWFPNPTELVNLVRRFSGSIMSENIAGNADCFLSSTINLA
AVLVRHGQYEAAQSLLGILDTHMNYVKASQADQDTDLARSSCLHLNGFCLLVLARDEANIVLKE
SKVHEAIRCFFRSRHSVLFHLCFCGGYFNQE*(+)
MSAPEEASDSFMNLGFFQDNVCFITCKHQKAKSIEMKA*(-)
						
					

						Sponge-miRNAs
						
							NA						
					

						circRNA-miRNA-mRNA network
						 VISUALIZATION
					

						Potential function description
						NA
					

			
		

Functional Information
Coding potential	Y
Potential coding position	2337728-2337757(+) 2340696-2337779(+) 2340709-2337757(+) 2337711-2340615(-)
Potential amino acid sequence	MFLRRLLQPGVNHSSALRETLLEHKRFLSDSYFQSLTTSGLRKEILSTIEQEGSSQTASSTAYH WKKFSARYLHNWCWNNRPYGLLLDTNREVFGLIRKGSFSLFRCLEGMEQFIYGSSDDLRNLDIL GVNPSDNISQSEILIEVLRCMDHISHLLGRSAAAIYHESLISSVISPDEIVSQILKILGTGFSP QSPSALITLFGTDAYAERRQTAHKSQRKFSVEMLLSFRKLQSKSTSWSAVFDVIENFMKYLNTN VTIQEYELKRVCNVNTALLVQATSQVARTMFESTFDLYLFLNYLVSIGGQVSLSQNDIARIKLK LFPVIQDILGQWIVLHFVGISPTTPPTIEDFSYQLSSLQLGKADDLSLHRKFGCSYFTLACLLD FPKSADGDVLSPWFPNPTELVNLVRRFSGSIMSENIAGNADCFLSSTINLAAVLVRHGQYEAAQ SLLGILDTHMNYVKASQADQDTDLARSSCLHLNGFCLLVLARDEANIVLKESKVHEAIRCFFRS RHSVLFHLCFCGGYFNQE(+) MKLSDASSGADIRFYFIYVFAEATSTRSESQFCST(+) MLLQEQTFGFISSMFLRRLLQPGVNHSSALRETLLEHKRFLSDSYFQSLTTSGLRKEILSTIEQ EGSSQTASSTAYHWKKFSARYLHNWCWNNRPYGLLLDTNREVFGLIRKGSFSLFRCLEGMEQFI YGSSDDLRNLDILGVNPSDNISQSEILIEVLRCMDHISHLLGRSAAAIYHESLISSVISPDEIV SQILKILGTGFSPQSPSALITLFGTDAYAERRQTAHKSQRKFSVEMLLSFRKLQSKSTSWSAVF DVIENFMKYLNTNVTIQEYELKRVCNVNTALLVQATSQVARTMFESTFDLYLFLNYLVSIGGQV SLSQNDIARIKLKLFPVIQDILGQWIVLHFVGISPTTPPTIEDFSYQLSSLQLGKADDLSLHRK FGCSYFTLACLLDFPKSADGDVLSPWFPNPTELVNLVRRFSGSIMSENIAGNADCFLSSTINLA AVLVRHGQYEAAQSLLGILDTHMNYVKASQADQDTDLARSSCLHLNGFCLLVLARDEANIVLKE SKVHEAIRCFFRSRHSVLFHLCFCGGYFNQE(+) MSAPEEASDSFMNLGFFQDNVCFITCKHQKAKSIEMKA(-)
Sponge-miRNAs	NA
circRNA-miRNA-mRNA network	VISUALIZATION
Potential function description	NA

			
						 Other Information
					
						References
						Chu et al., 2017

circRNA

Detail information of Os02g0142450_circ_g.2

Address

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