Detailed infomation of each circRNA
General Information | |
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CircRNA Name | AT4G27820_circ_g.9 |
ID in PlantcircBase | ath_circ_033223 |
Alias | 4:13859710-13860085 |
Organism | Arabidpsis thaliana |
Position | chr4: 13859710-13860085 JBrowse» |
Reference genome | TAIR10.38 |
Type | ue-circRNA |
Identification method | find_circ; CIRI2 |
Parent gene | AT4G27820 |
Parent gene annotation |
Beta-glucosidase 9 |
Parent gene strand | - |
Alternative splicing | 4_circ_ag.11 4_circ_ag.12 4_circ_ag.13 AT4G27820_circ_g.1 4_circ_ag.2 AT4G27820_circ_g.3 AT4G27820_circ_g.4 4_circ_ag.5 4_circ_ag.6 AT4G27820_circ_g.7 4_circ_ag.8 4_circ_ag.10 4_circ_ag.11 4_circ_ag.12 4_circ_ag.13 AT4G27830_circ_g.1 |
Support reads | 2/1/1/2 |
Tissues | seedling;leaf |
Exon boundary | Yes-Yes |
Splicing signals | CT-AC |
Number of exons covered | AT4G27820.2:3 AT4G27820.3:3 AT4G27820.1:3 |
Conservation Information | |
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Conserved circRNAs | NA |
PMCS | 0.173802593 |
Functional Information | |
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Coding potential | NA |
Potential coding position |
NA |
Potential amino acid sequence |
NA |
Sponge-miRNAs | NA |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | NA |
Other Information | |
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References | Philips et al., 2020 |