Detailed infomation of each circRNA
General Information | |
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CircRNA Name | AT4G27830_circ_g.1 |
ID in PlantcircBase | ath_circ_033228 |
Alias | NA |
Organism | Arabidpsis thaliana |
Position | chr4: 13863437-13863989 JBrowse» |
Reference genome | TAIR10.38 |
Type | ue-circRNA |
Identification method | PcircRNA_finder |
Parent gene | AT4G27830 |
Parent gene annotation |
Beta-glucosidase 10 |
Parent gene strand | - |
Alternative splicing | 4_circ_ag.11 4_circ_ag.12 4_circ_ag.13 AT4G27820_circ_g.1 4_circ_ag.2 AT4G27820_circ_g.3 AT4G27820_circ_g.4 4_circ_ag.5 4_circ_ag.6 AT4G27820_circ_g.7 4_circ_ag.8 AT4G27820_circ_g.9 4_circ_ag.10 4_circ_ag.11 4_circ_ag.12 4_circ_ag.13 |
Support reads | 4 |
Tissues | inflorescences |
Exon boundary | Yes-Yes |
Splicing signals | CT-AC |
Number of exons covered | AT4G27830.1:4 AT4G27830.2:4 |
Conservation Information | |
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Conserved circRNAs | NA |
PMCS | 0.171697421 |
Functional Information | |
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Coding potential | N |
Potential coding position |
NA |
Potential amino acid sequence |
NA |
Sponge-miRNAs | NA |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | NA |
Other Information | |
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References | Chu et al., 2017 |