Detailed infomation of each circRNA
General Information | |
---|---|
CircRNA Name | AT4G27820_circ_g.7 |
ID in PlantcircBase | ath_circ_033221 |
Alias | NA |
Organism | Arabidpsis thaliana |
Position | chr4: 13859538-13859781 JBrowse» |
Reference genome | TAIR10.38 |
Type | e-circRNA |
Identification method | PcircRNA_finder |
Parent gene | AT4G27820 |
Parent gene annotation |
Beta-glucosidase 9 |
Parent gene strand | - |
Alternative splicing | 4_circ_ag.11 4_circ_ag.12 4_circ_ag.13 AT4G27820_circ_g.1 4_circ_ag.2 AT4G27820_circ_g.3 AT4G27820_circ_g.4 4_circ_ag.5 4_circ_ag.6 4_circ_ag.8 AT4G27820_circ_g.9 4_circ_ag.10 4_circ_ag.11 4_circ_ag.12 4_circ_ag.13 AT4G27830_circ_g.1 |
Support reads | 1 |
Tissues | aerial |
Exon boundary | Yes-Yes |
Splicing signals | CT-AC |
Number of exons covered | AT4G27820.1:2 AT4G27820.3:2 AT4G27820.2:2 |
Conservation Information | |
---|---|
Conserved circRNAs | NA |
PMCS | 0.18993142 |
Functional Information | |
---|---|
Coding potential | N |
Potential coding position |
NA |
Potential amino acid sequence |
NA |
Sponge-miRNAs | NA |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | NA |
Other Information | |
---|---|
References | Chu et al., 2017 |