Splice junction sequence |
AGAATGCATGCAGTGAGCTTGGAGCACGTATGTCTGCCATGGACAGCTCCAGCAGAAACGCTGG TGAAATGCTTGATCGACTCACCCTCACATACAACAGgtgtcgatgtcaagaagaatgttattgt agccattacctctgacaagggtctttgtggtggtatcaactcaacgtcagttaaagtcagcaaa gcactcca
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Assembled circRNA sequence |
Yes
The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).
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Full-length trsnacripts |
Transcript length: 158 Transcript exons: 8693803-8693886,8696378-8696451 GTGTCGATGTCAAGAAGAATGTTATTGTAGCCATTACCTCTGACAAGGGTCTTTGTGGTGGTAT CAACTCAACGTCAGTTAAAGCGTATGTCTGCCATGGACAGCTCCAGCAGAAACGCTGGTGAAAT GCTTGATCGACTCACCCTCACATACAACAG
Transcript length: 194 Transcript exons: 8693803-8693890,8696346-8696451 GTGTCGATGTCAAGAAGAATGTTATTGTAGCCATTACCTCTGACAAGGGTCTTTGTGGTGGTAT CAACTCAACGTCAGTTAAAGTCAGCTCTAGAGAATGCATGCAGTGAGCTTGGAGCACGTATGTC TGCCATGGACAGCTCCAGCAGAAACGCTGGTGAAATGCTTGATCGACTCACCCTCACATACAAC AG
Transcript length: 215 Transcript exons: 8693803-8693916,8696351-8696451 GTGTCGATGTCAAGAAGAATGTTATTGTAGCCATTACCTCTGACAAGGGTCTTTGTGGTGGTAT CAACTCAACGTCAGTTAAAGTCAGCAAAGCACTCCACAAGTTGACTTCTGGAGAATGCATGCAG TGAGCTTGGAGCACGTATGTCTGCCATGGACAGCTCCAGCAGAAACGCTGGTGAAATGCTTGAT CGACTCACCCTCACATACAACAG
Transcript length: 604 Transcript exons: 8693803-8693916,8693996-8694123,8695826-8695948,8696041- 8696157,8696330-8696451 GTGTCGATGTCAAGAAGAATGTTATTGTAGCCATTACCTCTGACAAGGGTCTTTGTGGTGGTAT CAACTCAACGTCAGTTAAAGTCAGCAAAGCACTCCACAAGTTGACTTCTGGACCAGAGAAAGAA AGCAAGTATGTCATATTAGGAGAAAAGGGTAAAGTTCAACTCATTCGTGACTCCAAGGATAACA TCGAGATGACAGTATCTGAGTTGCAGAAGAACCCTATCAACTACACACAGATTGCTGTGCTGGC AGATGATATCTTGAAAAATGTTGAGTATGATGCTCTAAGGGTTGTTTTTAACAAGTTCCACTCG GTCATATCATTCAAGCCCACAATGACAACCATACTTTCCCCAGAGGTTATGGAGAAAGAATCGG AATCTGGTAAGGTTGGTGACCTGGATTCATATGAAATTGAAGGAGGTGAAACTAAATCAGAAAT TCTTCAGAATCTTACCGAGTTCCAGTTTTCTTGTGTTATGTATAATGCTGCTCTAGAGAATGCA TGCAGTGAGCTTGGAGCACGTATGTCTGCCATGGACAGCTCCAGCAGAAACGCTGGTGAAATGC TTGATCGACTCACCCTCACATACAACAG
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Genomic sequence |
GTGTCGATGTCAAGAAGAATGTTATTGTAGCCATTACCTCTGACAAGGGTCTTTGTGGTGGTAT CAACTCAACGTCAGTTAAAGTCAGCAAAGCACTCCACAAGTTGACTTCTGGTAATACTTTGCAT GGTTATTTTTGTTATCATTTAAACATTAGAAGATACTAAAACAAAGTTTTTGCACCTCAAATCA GGACCAGAGAAAGAAAGCAAGTATGTCATATTAGGAGAAAAGGGTAAAGTTCAACTCATTCGTG ACTCCAAGGATAACATCGAGATGACAGTATCTGAGTTGCAGAAGAACCCTATCAACTACACACA GGTATGTTGTTTTCCTGAGCTTTTACTATGCTATGGGTGCACCTTTTATTATGAAATGCTATTC ATTATTTGTGAATTTGTTTCTGAATTAAGTCTAAAGTTTGGCAATTGAAAACTGTTTTGTAGTT TCTTATATTGTCAGTGAATTTTGCTCTCGAATTTTGAATTTTGCAAGAGAAGCATTCCTAATGT AAAAGGAATTCTGTCATGTCACATTGGACTTCTGATTTGGAACACATTTCAATTTGTCAATGAC TAATCTCTGTTATTATAGCCAAAATATATATACTGATTTATCAATCTAAAATTTTACCAAATCA GACTCACTTCAGCCCACTCCGACTGTACCTTCCATTCCTTTTTCTCCATACTTTCTCCTGTTGC TGGCAAGCTGGGGCTAAGACTTGTTACAGAAAATCACTCTTTGAGATACTCGAATGAGACATAG ACATGATTGATCATCAAATGATGTGTTCCTCTTGTGTTTTAATAGTAACACTAGTTAGGGACTA GGAATAAGGCAATGATGTTGGAGCTATTGCAAGCAATGAGGCAGGGGAAGGGAGCCTGGTGCCA TCTTGGGAGGCTCCCTGTTTCAATATTTCCTTAAGCCAGCCACCACTACCTGGGTTCTCTAAGG CTGTCACCTGTCCTGTCCTGCTGATGTGTCCACCTGTGCCACTGAATCACAGCTGCTATGTTGG GGGCTGACACAGCTGCCATATTGGATCTGACTTGGTTTTGCTGGCCCTAGTTGGTGGGGAAAAA GGTCTGATAAGGGGATGGAGCATCAACCTGTGCTGAAAAAGTGGGAGGAGGGTACGGTAGTCAA GTTGCATGGCTAGTCATGGACCAATTGACAAGTCAGCCACAGAGCACGACTTGAGGGCTACAAT TTGATTTGGGAAACTTGGAATACGAGATAAGAGGAGAGCTGTTCAGTTTTCTCCTCCATATATG ATTAGAGGTAGCCACCGGAGTCTGAGTAAGATTAGAGGGAGCACCAATAGTTGCACACCTGCTT TCCTCATCTGCTCCCTGTTTTTTCTGACCTCACTTCTAATGTACCAACTCAAAGGCTTGTCTTT GACTAAGTCATGATTAGTCCTCAAGTTGGTTTAGGTCTTGAGGGATGACTAGACTGACTGTGCG ACTAACAACCATGGCTGAAGAATAGCACATCGGCATGGAGAAATGTGAAATATAGTGATGGATC TCATTGCTGTAGGATAAGGAATGGCACTGGTGGTGGCGCAAAGTTGTGCAGTTAGCAGAATTAG TTTCAGCTGTGTTAATTACGTTGCAGCAGAAGTTCACGGATGTGGTATATTTCAATGAAACAAG AGAGGATTATGGTACTAGATGATGTGTGAGAAGAAAGTGTTTTTTAGATTTAAGCTTCTAGTTA TGCTGTAGGTTGAAATATCTCATTTTCCTTTGCAAAGAAAGATGATCTGGATCATATTCATCTT TTGTTATGTGTGCACGCATTGCAATATATCATAGCAGCTGGTATGATTTGAACAAAATTTGCTA ACAAACCCTGAACTGTAAAAAGTCTTATGTTGTCTGACTTCCTTGAAATGTCTTCAGGGAAGTT TTTGTTCAGTCGATTATTATTTGGTGGCTAAAGCAGATTTCAAAAACCTAATGTGCCTATTGGA TTGAATAGATCTCCACTGTTTTCTTTGATGATGTTTCAGATTGCTGTGCTGGCAGATGATATCT TGAAAAATGTTGAGTATGATGCTCTAAGGGTTGTTTTTAACAAGTTCCACTCGGTCATATCATT CAAGCCCACAATGACAACCATACTTTCCCCAGAGGTAAATATCGGTGCTGAGGACATGAATTTG TGCTCCTATAAAGTAATATGAATGATGTGACGTTAATACTAGTGGTTTGAATTGTTTTATAGGT TATGGAGAAAGAATCGGAATCTGGTAAGGTTGGTGACCTGGATTCATATGAAATTGAAGGAGGT GAAACTAAATCAGAAATTCTTCAGAATCTTACCGAGTTCCAGTTTTCTTGTGTAAGTTTGTCTT CATTAATCATATATACCTCTCAATAGATGAATTAGCTACAACTATTACAGCCACAAAATCAAGT CGCATCCATAAGGGTAAACGTTCCCTTTGTAGAGAGCGCAATCATTCTTTTTTCAAGGTATCCT AGTGGTATCTTATGTTTTTGCTTTGTGGCAGGTTATGTATAATGCTGCTCTAGAGAATGCATGC AGTGAGCTTGGAGCACGTATGTCTGCCATGGACAGCTCCAGCAGAAACGCTGGTGAAATGCTTG ATCGACTCACCCTCACATACAACAG |