Detailed infomation of each circRNA
General Information | |
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CircRNA Name | Os06g0194900_circ_g.27 |
ID in PlantcircBase | osa_circ_030058 |
Alias | NA |
Organism | Oryza sativa |
Position | chr6: 4800801-4801162 JBrowse» |
Reference genome | IRGSP-1.0.38 |
Type | i-circRNA |
Identification method | CIRCexplorer |
Parent gene | Os06g0194900 |
Parent gene annotation |
Sucrose synthase 2 (EC 2.4.1.13). (Os06t0194900-01);Sucrose synt hase 2 (EC 2.4.1.13). (Os06t0194900-02);Sucrose synthase 2 (EC 2 .4.1.13). (Os06t0194900-03);Similar to Sucrose synthase 2. (Os06 t0194900-04) |
Parent gene strand | - |
Alternative splicing | Os06g0194900_circ_g.12 Os06g0194900_circ_g.13 Os06g0194900_circ_g.14 Os06g0194900_circ_g.15 Os06g0194900_circ_g.16 Os06g0194900_circ_g.17 Os06g0194900_circ_g.18 Os06g0194900_circ_g.19 Os06g0194900_circ_g.20 Os06g0194900_circ_g.21 Os06g0194900_circ_g.22 Os06g0194900_circ_g.23 Os06g0194900_circ_g.24 Os06g0194900_circ_g.25 Os06g0194900_circ_g.26 Os06g0194900_circ_g.28 |
Support reads | 1 |
Tissues | root |
Exon boundary | No-No |
Splicing signals | CT-AT |
Number of exons covered | 0 |
Conservation Information | |
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Conserved circRNAs | NA |
PMCS | 0.241914825 |
Functional Information | |
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Coding potential | N |
Potential coding position |
NA |
Potential amino acid sequence |
NA |
Sponge-miRNAs | NA |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | NA |
Other Information | |
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References | Chu et al., 2017 |