Plant Circular RNA Database

Detail information of Zm00001d041889_circ_g.4

			
				
						 General Information
					

				
						CircRNA Name
						Zm00001d041889_circ_g.4
					

						ID in PlantcircBase
						zma_circ_007659
					

						Alias
						Zm03circ00051
					

						Organism
						
							Zea mays						
					

						Position
						
							chr3: 142437098-142440195  JBrowse»						
					

						Reference genome
						
							AGPv4.38						
					

						Type  
						
							u-circRNA							
									
								

					

						Identification method
						CIRI2
					

						Parent gene
						
							Zm00001d041889						
					

						Parent gene annotation
						
							protein_coding
							
					

						Parent gene strand
						+
					

						Alternative splicing
						
							Zm00001d041889_circ_g.1 Zm00001d041889_circ_g.2 Zm00001d041889_circ_g.3 Zm00001d041889_circ_g.5 Zm00001d041889_circ_g.6 Zm00001d041889_circ_g.7 Zm00001d041889_circ_g.8 Zm00001d041889_circ_g.9 Zm00001d041889_circ_g.10 Zm00001d041889_circ_g.11 Zm00001d041889_circ_g.12 Zm00001d041889_circ_g.13 Zm00001d041889_circ_g.14 Zm00001d041889_circ_g.15 Zm00001d041889_circ_g.16 Zm00001d041889_circ_g.17 Zm00001d041889_circ_g.18 Zm00001d041889_circ_g.19 						
					

						Support reads
						NA
					

						Tissues
						leaf, endosperm
					

						Exon boundary  
						
							Yes-Yes							"Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.

					

						Splicing signals  
						
							GT-AG							The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.

					

						Number of exons covered
						Zm00001d041889_T016:10
Zm00001d041889_T143:6
Zm00001d041889_T029:8
Zm00001d041889_T061:10
Zm00001d041889_T134:10
Zm00001d041889_T145:7
Zm00001d041889_T064:10
Zm00001d041889_T054:10
Zm00001d041889_T129:10
Zm00001d041889_T019:11
Zm00001d041889_T116:8
Zm00001d041889_T144:6
Zm00001d041889_T073:9
Zm00001d041889_T022:10
Zm00001d041889_T079:10
Zm00001d041889_T012:10
Zm00001d041889_T150:3
Zm00001d041889_T140:5
Zm00001d041889_T065:10
Zm00001d041889_T005:10
Zm00001d041889_T068:9
Zm00001d041889_T106:10
Zm00001d041889_T002:10
Zm00001d041889_T036:10
Zm00001d041889_T148:3
Zm00001d041889_T049:9
Zm00001d041889_T151:2
Zm00001d041889_T025:10
Zm00001d041889_T031:8
Zm00001d041889_T045:8
Zm00001d041889_T132:9
Zm00001d041889_T027:10
Zm00001d041889_T081:10
Zm00001d041889_T115:9
Zm00001d041889_T094:10
Zm00001d041889_T066:10
Zm00001d041889_T092:10
Zm00001d041889_T136:8
Zm00001d041889_T139:8
Zm00001d041889_T077:9
Zm00001d041889_T062:10
Zm00001d041889_T083:10
Zm00001d041889_T007:10
Zm00001d041889_T107:9
Zm00001d041889_T086:9
Zm00001d041889_T048:10
Zm00001d041889_T089:10
Zm00001d041889_T090:9
Zm00001d041889_T114:9
Zm00001d041889_T070:10
Zm00001d041889_T087:10
Zm00001d041889_T117:10
Zm00001d041889_T138:8
Zm00001d041889_T102:7
Zm00001d041889_T082:10
Zm00001d041889_T146:4
Zm00001d041889_T149:3
Zm00001d041889_T035:10
Zm00001d041889_T147:4
Zm00001d041889_T034:7
Zm00001d041889_T010:8
Zm00001d041889_T152:2
Zm00001d041889_T041:10
Zm00001d041889_T003:10
Zm00001d041889_T075:8
Zm00001d041889_T057:9
Zm00001d041889_T101:8
Zm00001d041889_T113:10
Zm00001d041889_T014:10
Zm00001d041889_T131:10
Zm00001d041889_T059:10
Zm00001d041889_T096:10
Zm00001d041889_T039:8
Zm00001d041889_T142:6
Zm00001d041889_T108:10
Zm00001d041889_T103:10
Zm00001d041889_T001:10
Zm00001d041889_T099:8
Zm00001d041889_T097:10
Zm00001d041889_T033:10
Zm00001d041889_T153:1
Zm00001d041889_T135:10
Zm00001d041889_T137:8
Zm00001d041889_T042:10
Zm00001d041889_T021:9
Zm00001d041889_T085:8
Zm00001d041889_T047:9
Zm00001d041889_T018:10
Zm00001d041889_T141:7
Zm00001d041889_T051:10

					

			
		

General Information
CircRNA Name	Zm00001d041889_circ_g.4
ID in PlantcircBase	zma_circ_007659
Alias	Zm03circ00051
Organism	Zea mays
Position	chr3: 142437098-142440195 JBrowse»
Reference genome	AGPv4.38
Type	u-circRNA
Identification method	CIRI2
Parent gene	Zm00001d041889
Parent gene annotation	protein_coding
Parent gene strand	+
Alternative splicing	Zm00001d041889_circ_g.1 Zm00001d041889_circ_g.2 Zm00001d041889_circ_g.3 Zm00001d041889_circ_g.5 Zm00001d041889_circ_g.6 Zm00001d041889_circ_g.7 Zm00001d041889_circ_g.8 Zm00001d041889_circ_g.9 Zm00001d041889_circ_g.10 Zm00001d041889_circ_g.11 Zm00001d041889_circ_g.12 Zm00001d041889_circ_g.13 Zm00001d041889_circ_g.14 Zm00001d041889_circ_g.15 Zm00001d041889_circ_g.16 Zm00001d041889_circ_g.17 Zm00001d041889_circ_g.18 Zm00001d041889_circ_g.19
Support reads	NA
Tissues	leaf, endosperm
Exon boundary	Yes-Yes "Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.
Splicing signals	GT-AG The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.
Number of exons covered	Zm00001d041889_T016:10 Zm00001d041889_T143:6 Zm00001d041889_T029:8 Zm00001d041889_T061:10 Zm00001d041889_T134:10 Zm00001d041889_T145:7 Zm00001d041889_T064:10 Zm00001d041889_T054:10 Zm00001d041889_T129:10 Zm00001d041889_T019:11 Zm00001d041889_T116:8 Zm00001d041889_T144:6 Zm00001d041889_T073:9 Zm00001d041889_T022:10 Zm00001d041889_T079:10 Zm00001d041889_T012:10 Zm00001d041889_T150:3 Zm00001d041889_T140:5 Zm00001d041889_T065:10 Zm00001d041889_T005:10 Zm00001d041889_T068:9 Zm00001d041889_T106:10 Zm00001d041889_T002:10 Zm00001d041889_T036:10 Zm00001d041889_T148:3 Zm00001d041889_T049:9 Zm00001d041889_T151:2 Zm00001d041889_T025:10 Zm00001d041889_T031:8 Zm00001d041889_T045:8 Zm00001d041889_T132:9 Zm00001d041889_T027:10 Zm00001d041889_T081:10 Zm00001d041889_T115:9 Zm00001d041889_T094:10 Zm00001d041889_T066:10 Zm00001d041889_T092:10 Zm00001d041889_T136:8 Zm00001d041889_T139:8 Zm00001d041889_T077:9 Zm00001d041889_T062:10 Zm00001d041889_T083:10 Zm00001d041889_T007:10 Zm00001d041889_T107:9 Zm00001d041889_T086:9 Zm00001d041889_T048:10 Zm00001d041889_T089:10 Zm00001d041889_T090:9 Zm00001d041889_T114:9 Zm00001d041889_T070:10 Zm00001d041889_T087:10 Zm00001d041889_T117:10 Zm00001d041889_T138:8 Zm00001d041889_T102:7 Zm00001d041889_T082:10 Zm00001d041889_T146:4 Zm00001d041889_T149:3 Zm00001d041889_T035:10 Zm00001d041889_T147:4 Zm00001d041889_T034:7 Zm00001d041889_T010:8 Zm00001d041889_T152:2 Zm00001d041889_T041:10 Zm00001d041889_T003:10 Zm00001d041889_T075:8 Zm00001d041889_T057:9 Zm00001d041889_T101:8 Zm00001d041889_T113:10 Zm00001d041889_T014:10 Zm00001d041889_T131:10 Zm00001d041889_T059:10 Zm00001d041889_T096:10 Zm00001d041889_T039:8 Zm00001d041889_T142:6 Zm00001d041889_T108:10 Zm00001d041889_T103:10 Zm00001d041889_T001:10 Zm00001d041889_T099:8 Zm00001d041889_T097:10 Zm00001d041889_T033:10 Zm00001d041889_T153:1 Zm00001d041889_T135:10 Zm00001d041889_T137:8 Zm00001d041889_T042:10 Zm00001d041889_T021:9 Zm00001d041889_T085:8 Zm00001d041889_T047:9 Zm00001d041889_T018:10 Zm00001d041889_T141:7 Zm00001d041889_T051:10

			
						 Experimental Information
					
						Sanger sequencing for BSS  
						
							NA							Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".

						PCR primers for BSS   
						
							NA							PCR primers used in back-splicing site (BSS) validation.

						Sanger sequencing for FL   
						
							NA							Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.

						PCR primers for FL   
						
							NA							 PCR primers used in full-length (FL) sequence validation.

Experimental Information
Sanger sequencing for BSS	NA Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".
PCR primers for BSS	NA PCR primers used in back-splicing site (BSS) validation.
Sanger sequencing for FL	NA Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.
PCR primers for FL	NA PCR primers used in full-length (FL) sequence validation.

			
				
						 Sequences
					

				
						Splice junction sequence  
						
							CCTTTCTCAGATGTTTTAGCTCAGGAGAATTGTAATGACCAGCCTGTTCCGGCCCAGACTGACC
TAGAAATGAAGTTAAACGATGAACTTGCTGATCCGGaagttttagctcaggagaattgtaatga
ccagcctgttcctgcccagactgaccaagaaattaagttaaacgatgaacttgctgatccgggt
atggactg

									
								

					

						Assembled circRNA sequence  
						
							NA
The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).

					

						Full-length trsnacripts
						
							NA						
					

						Genomic sequence
						
							AAGTTTTAGCTCAGGAGAATTGTAATGACCAGCCTGTTCCTGCCCAGACTGACCAAGAAATTAA
GTTAAACGATGAACTTGCTGATCCGGGTATGGACTGTGTTTAATTTACCAATTTTAAACATACT
GAGTTCTAAGTCAAGTTGTTGGTTACTTTCATTCTAATTATTTTTAATAGGCTTTATGTTTGTT
CTATCTGCAACAGCTAGGCACATGTTTCATTGTCATTTATTGTCTTTTAAGTATCTGACATTTA
TTTTTTAAATGTATTCTTTCCCTTTATCAGATGTTTTAGCTCAGGAGAATTGTAATGACCAGCC
CGTTCCTGCCCAGACTGACCTAGAAATTAAGTTACACGATGAACTTGCTGATCCGGGTATGTAC
TGTGTTTAATTTACCAATTTTCAACATACTGAGTTCTAAGTCAAATTATTGGCTACGTGTAATT
CTAATTATTAGATTTGTGCATTATTGTCATGTTATATACTGAAAGGAAGACTTTGTCGTTCCAA
AATCACCAAATGGTTTATCAATTAGTTTCACTGTTGCAGACCATGAAGAGCAAAGCCCTGTATC
CGGAGAACGGAGAGTTAGCTTGGAAGCAAATGCCAACGAGCCTGAGGAAAAGAACCTAGCTAAC
GTCATATCAATTGATCTCCACACCAAAAGTCTGCAGCATGATAATGGCAGAATAGCTGAAGAGA
CTGATAAAGGTACAACTGAATTAATCCTGTATCCCCAATAAAAGCTCTGCAACATTGATGAGTG
AAGATAATATGTATGCTGAACATCTAAATCCACCTGTGCCAGCTCTCATTCACTGTTTTTTTCT
AAAGATCTTGCTTCAAGATTTTCAATTCACTAAATTAAACTTGCTAAATCTCCAGATGTTTTGT
CTTTTGTTTTCCCTATTGAAGAGCATGAAGAAAAATATGCAGTTAGCCCTATAGCCGTTGAAAA
GAGCTTCCGTCAGGAAGCAAGTGCAATTGAATCTGCAGGAAAACCCCTAACTGTCATCTTTTCT
AACGATCTCCACACCAAACATCTGCAACATGATTGTGATGTGCTAATTAAGGAGACTGGTGAAG
GTAATATTGCATTAATACTTGTTCCACAACTTGTTACTGATCTGCGGAGATGGTGATGAAAACT
TGTGCTGTTTGCACTGTGTTGACATTTTTTAAATGTATTCTTTCCCTTTCTCAGAAGTTTTAGC
TCAGGAGAATTGTAATGACCAGCCTGTTCCTGCCCAGACCGACCTAGAAATTAAGTTAAATGAT
GAACTTGCTGATCCGGGTATGGACCGTGTTTAATTTACCAATTTTAAACATACCGAGTTCTAAG
TCAAGTTGTTGGCTACTTGTAATTCTAATTGTTTTTAATAGGCTTTATATTTATTCTATCTGCA
AAAGCTAGGCATATGTTTCATTGTCATTTGATGTCTTTTAAGTATCTGACATTTATTTTTTAAA
TGTATTCTTTCCCTTTATCAGATGTTTTAGCTCAGGAGAATTGTAATGACCAGCCTGTTCCTGC
CAACGAGCCTGAGGAAAAGAACCTAGCTAACGTCATATCAACTGATCTCCACACCAAAACTCTG
CAGCATGATAATGACAGAATAGCTGAAGAGACTGATAAAGGTACAACCGAATTAATCCTGCCCA
GACTGACCTAGAAATTAAGTTAAACGATGAACTTGCTGATCCGGGTATGGACTGTGTTTAATTT
ACCAATTTTAAACATACTGCAGAGTTTTGGTTTATCAATTAGTTTCACTGTTGCAGACCATGAA
GAGCAAAGCAATGTGTTCGGAGAACGGAGAGTTAGCTTGGAAGCAAATGCCAACGAGCCTGAGG
AAAAGAACCTAGCTAACGTCATATCAACTGATCTCCACACCAAAACTCTGCAGCATGATAATGA
CAGAATAGCTGAAGAGACTGATAAAGGTACAACCGAATTAATCCTGCCCAGACTGACCTAGAAA
TTAAGTTAAACGATGAACTTGCTGATCCGGGTATGGACTGTGTTTAATTTACCAATTTTAAACA
TACTGAGTTCTAAGTCAAATTGTTGGCTACGTGTAATTCTAATCATTAGCTTTGTCCATTATTG
TCATGTTATATACTGAAAGGAAGACTTTGTCGTTCCAAAATCACCAAATGGTTTATCAATTAGT
TTCACTGTTGCAGACCATGAAGAGCAAAGCAATGTGTCCGGAGAACGGAGAGTTAGCTTGGAAG
CAAATGCCAACGAGCCTGAGGAAAAGAACCTAGCTAACGTCATATCAACTGATCTCCACACCAA
AACTCTGCAGCATGATAATGACAGAATAGCTGAAGAGACTGATAAAGGTACAACCGAATTAATC
CTGTATCCATAATAAAAACTCCGCAACATTGATGAGTGAAGATAATATGTATGCTGAACATCTA
AATCCACCTGTGCCAACTGATTATTCACTATTTTTTTTCTAAAGATCTTGCTTAGTAATCTTGC
TTCAAGATTTTCAATTCACTAAATTAAACTTGCTAAATCTCCAGATGTTTCGTCTTTGGTTTTC
CCTATTGAAGAGCATGAAGAAAAATATGCAGTGAGCCCTATAGCTGTTGAAAAGAGCGTCAGTC
GGGAAGCCAGTGCATGTGAATCTGCAGGAAAACCCCTAACTGTCATCTTTTCTAACGATCTCCA
CACCAAACATCTGCAACATGATTGTGATGTGCTAATTAAGGAGACTGGTGAAGGTAATATTGCA
TTAATATTTGTTCCACAACTTGTTACTGATCTGCGGAGATGGTGATGAAAACTTGTGCTGTTTG
CACTGTGTTTAATTTACCAATTTTAAACATACTGAGTTCTAAGTCAAGTTGTTGGCTACTTGTA
ATTCTATATATTTTTAATAGGCTTTATGTTTGTTGTATCTGCAACAGTTAGGCATATGTTTCAT
TGTCATTTGTTGTCTTTTAAGTATCTGACATTTATTTTTTAAATGTATTCTTTCCCTTTCTCAG
ATGTTTTAGCTCAGGAGAATTGTAATGACCAGCCTGTTCCGGCCCAGACTGACCTAGAAATGAA
GTTAAACGATGAACTTGCTGATCCGG
						
					

			
		

Sequences
Splice junction sequence	CCTTTCTCAGATGTTTTAGCTCAGGAGAATTGTAATGACCAGCCTGTTCCGGCCCAGACTGACC TAGAAATGAAGTTAAACGATGAACTTGCTGATCCGGaagttttagctcaggagaattgtaatga ccagcctgttcctgcccagactgaccaagaaattaagttaaacgatgaacttgctgatccgggt atggactg
Assembled circRNA sequence	NA The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).
Full-length trsnacripts	NA
Genomic sequence	AAGTTTTAGCTCAGGAGAATTGTAATGACCAGCCTGTTCCTGCCCAGACTGACCAAGAAATTAA GTTAAACGATGAACTTGCTGATCCGGGTATGGACTGTGTTTAATTTACCAATTTTAAACATACT GAGTTCTAAGTCAAGTTGTTGGTTACTTTCATTCTAATTATTTTTAATAGGCTTTATGTTTGTT CTATCTGCAACAGCTAGGCACATGTTTCATTGTCATTTATTGTCTTTTAAGTATCTGACATTTA TTTTTTAAATGTATTCTTTCCCTTTATCAGATGTTTTAGCTCAGGAGAATTGTAATGACCAGCC CGTTCCTGCCCAGACTGACCTAGAAATTAAGTTACACGATGAACTTGCTGATCCGGGTATGTAC TGTGTTTAATTTACCAATTTTCAACATACTGAGTTCTAAGTCAAATTATTGGCTACGTGTAATT CTAATTATTAGATTTGTGCATTATTGTCATGTTATATACTGAAAGGAAGACTTTGTCGTTCCAA AATCACCAAATGGTTTATCAATTAGTTTCACTGTTGCAGACCATGAAGAGCAAAGCCCTGTATC CGGAGAACGGAGAGTTAGCTTGGAAGCAAATGCCAACGAGCCTGAGGAAAAGAACCTAGCTAAC GTCATATCAATTGATCTCCACACCAAAAGTCTGCAGCATGATAATGGCAGAATAGCTGAAGAGA CTGATAAAGGTACAACTGAATTAATCCTGTATCCCCAATAAAAGCTCTGCAACATTGATGAGTG AAGATAATATGTATGCTGAACATCTAAATCCACCTGTGCCAGCTCTCATTCACTGTTTTTTTCT AAAGATCTTGCTTCAAGATTTTCAATTCACTAAATTAAACTTGCTAAATCTCCAGATGTTTTGT CTTTTGTTTTCCCTATTGAAGAGCATGAAGAAAAATATGCAGTTAGCCCTATAGCCGTTGAAAA GAGCTTCCGTCAGGAAGCAAGTGCAATTGAATCTGCAGGAAAACCCCTAACTGTCATCTTTTCT AACGATCTCCACACCAAACATCTGCAACATGATTGTGATGTGCTAATTAAGGAGACTGGTGAAG GTAATATTGCATTAATACTTGTTCCACAACTTGTTACTGATCTGCGGAGATGGTGATGAAAACT TGTGCTGTTTGCACTGTGTTGACATTTTTTAAATGTATTCTTTCCCTTTCTCAGAAGTTTTAGC TCAGGAGAATTGTAATGACCAGCCTGTTCCTGCCCAGACCGACCTAGAAATTAAGTTAAATGAT GAACTTGCTGATCCGGGTATGGACCGTGTTTAATTTACCAATTTTAAACATACCGAGTTCTAAG TCAAGTTGTTGGCTACTTGTAATTCTAATTGTTTTTAATAGGCTTTATATTTATTCTATCTGCA AAAGCTAGGCATATGTTTCATTGTCATTTGATGTCTTTTAAGTATCTGACATTTATTTTTTAAA TGTATTCTTTCCCTTTATCAGATGTTTTAGCTCAGGAGAATTGTAATGACCAGCCTGTTCCTGC CAACGAGCCTGAGGAAAAGAACCTAGCTAACGTCATATCAACTGATCTCCACACCAAAACTCTG CAGCATGATAATGACAGAATAGCTGAAGAGACTGATAAAGGTACAACCGAATTAATCCTGCCCA GACTGACCTAGAAATTAAGTTAAACGATGAACTTGCTGATCCGGGTATGGACTGTGTTTAATTT ACCAATTTTAAACATACTGCAGAGTTTTGGTTTATCAATTAGTTTCACTGTTGCAGACCATGAA GAGCAAAGCAATGTGTTCGGAGAACGGAGAGTTAGCTTGGAAGCAAATGCCAACGAGCCTGAGG AAAAGAACCTAGCTAACGTCATATCAACTGATCTCCACACCAAAACTCTGCAGCATGATAATGA CAGAATAGCTGAAGAGACTGATAAAGGTACAACCGAATTAATCCTGCCCAGACTGACCTAGAAA TTAAGTTAAACGATGAACTTGCTGATCCGGGTATGGACTGTGTTTAATTTACCAATTTTAAACA TACTGAGTTCTAAGTCAAATTGTTGGCTACGTGTAATTCTAATCATTAGCTTTGTCCATTATTG TCATGTTATATACTGAAAGGAAGACTTTGTCGTTCCAAAATCACCAAATGGTTTATCAATTAGT TTCACTGTTGCAGACCATGAAGAGCAAAGCAATGTGTCCGGAGAACGGAGAGTTAGCTTGGAAG CAAATGCCAACGAGCCTGAGGAAAAGAACCTAGCTAACGTCATATCAACTGATCTCCACACCAA AACTCTGCAGCATGATAATGACAGAATAGCTGAAGAGACTGATAAAGGTACAACCGAATTAATC CTGTATCCATAATAAAAACTCCGCAACATTGATGAGTGAAGATAATATGTATGCTGAACATCTA AATCCACCTGTGCCAACTGATTATTCACTATTTTTTTTCTAAAGATCTTGCTTAGTAATCTTGC TTCAAGATTTTCAATTCACTAAATTAAACTTGCTAAATCTCCAGATGTTTCGTCTTTGGTTTTC CCTATTGAAGAGCATGAAGAAAAATATGCAGTGAGCCCTATAGCTGTTGAAAAGAGCGTCAGTC GGGAAGCCAGTGCATGTGAATCTGCAGGAAAACCCCTAACTGTCATCTTTTCTAACGATCTCCA CACCAAACATCTGCAACATGATTGTGATGTGCTAATTAAGGAGACTGGTGAAGGTAATATTGCA TTAATATTTGTTCCACAACTTGTTACTGATCTGCGGAGATGGTGATGAAAACTTGTGCTGTTTG CACTGTGTTTAATTTACCAATTTTAAACATACTGAGTTCTAAGTCAAGTTGTTGGCTACTTGTA ATTCTATATATTTTTAATAGGCTTTATGTTTGTTGTATCTGCAACAGTTAGGCATATGTTTCAT TGTCATTTGTTGTCTTTTAAGTATCTGACATTTATTTTTTAAATGTATTCTTTCCCTTTCTCAG ATGTTTTAGCTCAGGAGAATTGTAATGACCAGCCTGTTCCGGCCCAGACTGACCTAGAAATGAA GTTAAACGATGAACTTGCTGATCCGG

			
						 Conservation Information
					
						Conserved circRNAs
						
							NA						
					
						PMCS
						0.222597542

Conservation Information
Conserved circRNAs	NA
PMCS	0.222597542

			
						 Functional Information
					
						Coding potential
						Y
					
						Potential coding position
						
							142440166-142440192(+)
						
						Potential amino acid sequence
						
							MKLNDELADPEVLAQENCNDQPVPAQTDQEIKLNDELADPDVLAQENCNDQPVPAQTDLEIKLH
DELADPDHEEQSPVSGERRVSLEANANEPEEKNLANVISIDLHTKSLQHDNGRIAEETDKEHEE
KYAVSPIAVEKSFRQEASAIESAGKPLTVIFSNDLHTKHLQHDCDVLIKETGEEVLAQENCNDQ
PVPAQTDLEIKLNDELADPDVLAQENCNDQPVPANEPEEKNLANVISTDLHTKTLQHDNDRIAE
ETDKDHEEQSNVFGERRVSLEANANEPEEKNLANVISTDLHTKTLQHDNDRIAEETDKDHEEQS
NVSGERRVSLEANANEPEEKNLANVISTDLHTKTLQHDNDRIAEETDKDVSSLVFPIEEHEEKY
AVSPIAVEKSVSREASACESAGKPLTVIFSNDLHTKHLQHDCDVLIKETGEDVLAQENCNDQPV
PAQTDLEMKLNDELADPEVLAQENCNDQPVPAQTDQEIKLNDELADPDVLAQENCNDQPVPAQT
DLEIKLHDELADPDHEEQSPVSGERRVSLEANANEPEEKNLANVISIDLHTKSLQHDNGRIAEE
TDKEHEEKYAVSPIAVEKSFRQEASAIESAGKPLTVIFSNDLHTKHLQHDCDVLIKETGEEVLA
QENCNDQPVPAQTDLEIKLNDELADPDVLAQENCNDQPVPANEPEEKNLANVISTDLHTKTLQH
DNDRIAEETDKDHEEQSNVFGERRVSLEANANEPEEKNLANVISTDLHTKTLQHDNDRIAEETD
KDHEEQSNVSGERRVSLEANANEPEEKNLANVISTDLHTKTLQHDNDRIAEETDKDVSSLVFPI
EEHEEKYAVSPIAVEKSVSREASACESAGKPLTVIFSNDLHTKHLQHDCDVLIKETGEDVLAQE
NCNDQPVPAQTDLEMKLNDELADPEVLAQENCNDQPVPAQTDQEIKLNDELADPDVLAQENCND
QPVPAQTDLEIKLHDELADPDHEEQSPVSGERRVSLEANANEPEEKNLANVISIDLHTKSLQHD
NGRIAEETDKEHEEKYAVSPIAVEKSFRQEASAIESAGKPLTVIFSNDLHTKHLQHDCDVLIKE
TGEEVLAQENCNDQPVPAQTDLEIKLNDELADPDVLAQENCNDQPVPANEPEEKNLANVISTDL
HTKTLQHDNDRIAEETDKDHEEQSNVFGERRVSLEANANEPEEKNLANVISTDLHTKTLQHDND
RIAEETDKDHEEQSNVSGERRVSLEANANEPEEKNLANVISTDLHTKTLQHDNDRIAEETDKDV
SSLVFPIEEHEEKYAVSPIAVEKSVSREASACESAGKPLTVIFSNDLHTKHLQHDCDVLIKETG
EDVLAQENCNDQPVPAQTDLEMKLNDELADP(+)
						
						Sponge-miRNAs
						
							NA						
					
						circRNA-miRNA-mRNA network
						 VISUALIZATION
					
						Potential function description
						NA

Functional Information
Coding potential	Y
Potential coding position	142440166-142440192(+)
Potential amino acid sequence	MKLNDELADPEVLAQENCNDQPVPAQTDQEIKLNDELADPDVLAQENCNDQPVPAQTDLEIKLH DELADPDHEEQSPVSGERRVSLEANANEPEEKNLANVISIDLHTKSLQHDNGRIAEETDKEHEE KYAVSPIAVEKSFRQEASAIESAGKPLTVIFSNDLHTKHLQHDCDVLIKETGEEVLAQENCNDQ PVPAQTDLEIKLNDELADPDVLAQENCNDQPVPANEPEEKNLANVISTDLHTKTLQHDNDRIAE ETDKDHEEQSNVFGERRVSLEANANEPEEKNLANVISTDLHTKTLQHDNDRIAEETDKDHEEQS NVSGERRVSLEANANEPEEKNLANVISTDLHTKTLQHDNDRIAEETDKDVSSLVFPIEEHEEKY AVSPIAVEKSVSREASACESAGKPLTVIFSNDLHTKHLQHDCDVLIKETGEDVLAQENCNDQPV PAQTDLEMKLNDELADPEVLAQENCNDQPVPAQTDQEIKLNDELADPDVLAQENCNDQPVPAQT DLEIKLHDELADPDHEEQSPVSGERRVSLEANANEPEEKNLANVISIDLHTKSLQHDNGRIAEE TDKEHEEKYAVSPIAVEKSFRQEASAIESAGKPLTVIFSNDLHTKHLQHDCDVLIKETGEEVLA QENCNDQPVPAQTDLEIKLNDELADPDVLAQENCNDQPVPANEPEEKNLANVISTDLHTKTLQH DNDRIAEETDKDHEEQSNVFGERRVSLEANANEPEEKNLANVISTDLHTKTLQHDNDRIAEETD KDHEEQSNVSGERRVSLEANANEPEEKNLANVISTDLHTKTLQHDNDRIAEETDKDVSSLVFPI EEHEEKYAVSPIAVEKSVSREASACESAGKPLTVIFSNDLHTKHLQHDCDVLIKETGEDVLAQE NCNDQPVPAQTDLEMKLNDELADPEVLAQENCNDQPVPAQTDQEIKLNDELADPDVLAQENCND QPVPAQTDLEIKLHDELADPDHEEQSPVSGERRVSLEANANEPEEKNLANVISIDLHTKSLQHD NGRIAEETDKEHEEKYAVSPIAVEKSFRQEASAIESAGKPLTVIFSNDLHTKHLQHDCDVLIKE TGEEVLAQENCNDQPVPAQTDLEIKLNDELADPDVLAQENCNDQPVPANEPEEKNLANVISTDL HTKTLQHDNDRIAEETDKDHEEQSNVFGERRVSLEANANEPEEKNLANVISTDLHTKTLQHDND RIAEETDKDHEEQSNVSGERRVSLEANANEPEEKNLANVISTDLHTKTLQHDNDRIAEETDKDV SSLVFPIEEHEEKYAVSPIAVEKSVSREASACESAGKPLTVIFSNDLHTKHLQHDCDVLIKETG EDVLAQENCNDQPVPAQTDLEMKLNDELADP(+)
Sponge-miRNAs	NA
circRNA-miRNA-mRNA network	VISUALIZATION
Potential function description	NA

			
						 Other Information
					
						References
						Han et al., 2020

circRNA

Detail information of Zm00001d041889_circ_g.4

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