Detailed infomation of each circRNA
General Information | |
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CircRNA Name | 5_circ_ag.2 |
ID in PlantcircBase | ath_circ_037842 |
Alias | At_ciR175 |
Organism | Arabidpsis thaliana |
Position | chr5: 4094746-4099371 JBrowse» |
Reference genome | TAIR10.38 |
Type | ag-circRNA |
Identification method | CIRI, find_circ |
Parent gene | NA |
Parent gene annotation | NA |
Parent gene strand | NA |
Alternative splicing | 5_circ_ag.2 5_circ_ag.3 5_circ_ag.4 AT5G12950_circ_g.1 AT5G12950_circ_g.3 AT5G12950_circ_g.4 5_circ_ag.5 5_circ_ag.6 5_circ_ag.7 5_circ_ag.8 5_circ_ag.9 5_circ_ag.10 |
Support reads | 62/179 |
Tissues | leaf/root, leaf, aerial, inflorescences, whole_plant |
Exon boundary | Yes-Yes |
Splicing signals | GT-AG |
Number of exons covered | NA |
Conservation Information | |
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Conserved circRNAs | NA |
PMCS | 0.63627662 |
Functional Information | |
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Coding potential | N |
Potential coding position |
NA |
Potential amino acid sequence |
NA |
Sponge-miRNAs | NA |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | NA |
Other Information | |
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References | Ye et al., 2015;Chu et al., 2017 |