Detailed infomation of each circRNA
General Information | |
---|---|
CircRNA Name | AT1G03260_circ_g.2 |
ID in PlantcircBase | ath_circ_000421 |
Alias | NA |
Organism | Arabidpsis thaliana |
Position | chr1: 796066-796535 JBrowse» |
Reference genome | TAIR10.38 |
Type | i-circRNA |
Identification method | CIRCexplorer |
Parent gene | AT1G03260 |
Parent gene annotation |
At1g03260 |
Parent gene strand | - |
Alternative splicing | 1_circ_igg.3 AT1G03250_circ_g.1 AT1G03260_circ_g.1 AT1G03260_circ_g.3 AT1G03270_circ_g.1 AT1G03270_circ_g.2 AT1G03280_circ_g.1 AT1G03290_circ_g.1 AT1G03290_circ_g.2 AT1G03350_circ_g.1 AT1G03360_circ_g.1 AT1G03365_circ_g.1 AT1G03365_circ_g.2 AT1G03380_circ_g.1 AT1G03380_circ_g.2 AT1G03430_circ_g.1 AT1G03440_circ_g.1 AT1G03440_circ_g.2 AT1G03445_circ_g.1 AT1G03457_circ_g.1 AT1G03475_circ_g.1 AT1G03475_circ_g.2 AT1G03475_circ_g.3 AT1G03475_circ_g.4 AT1G03475_circ_g.5 AT1G03475_circ_g.6 AT1G03475_circ_g.7 AT1G03475_circ_g.8 AT1G03550_circ_g.1 |
Support reads | 1 |
Tissues | whole_plant |
Exon boundary | No-No |
Splicing signals | CC-AC |
Number of exons covered | 0 |
Conservation Information | |
---|---|
Conserved circRNAs | NA |
PMCS | 0.16068315 |
Functional Information | |
---|---|
Coding potential | N |
Potential coding position |
NA |
Potential amino acid sequence |
NA |
Sponge-miRNAs | NA |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | NA |
Other Information | |
---|---|
References | Chu et al., 2017 |