Detailed infomation of each circRNA
| General Information | |
|---|---|
| CircRNA Name | 5_circ_ag.2 |
| ID in PlantcircBase | ath_circ_037838 |
| Alias | Ath_circ_FC3261 |
| Organism | Arabidpsis thaliana |
| Position | chr5: 4093838-4098313 JBrowse» |
| Reference genome | TAIR10.38 |
| Type | ag-circRNA |
| Identification method | CIRI, find_circ |
| Parent gene | NA |
| Parent gene annotation | NA |
| Parent gene strand | NA |
| Alternative splicing | 5_circ_ag.3 5_circ_ag.4 AT5G12950_circ_g.1 5_circ_ag.2 AT5G12950_circ_g.3 AT5G12950_circ_g.4 5_circ_ag.5 5_circ_ag.6 5_circ_ag.7 5_circ_ag.8 5_circ_ag.9 5_circ_ag.10 |
| Support reads | 46 |
| Tissues | root, leaf, aerial, inflorescences, whole_plant |
| Exon boundary | Yes-Yes |
| Splicing signals | GT-AG |
| Number of exons covered | NA |
| Conservation Information | |
|---|---|
| Conserved circRNAs | NA |
| PMCS | 0.750102942 |
| Functional Information | |
|---|---|
| Coding potential | N |
| Potential coding position |
NA |
| Potential amino acid sequence |
NA |
| Sponge-miRNAs | NA |
| circRNA-miRNA-mRNA network | VISUALIZATION |
| Potential function description | NA |
| Other Information | |
|---|---|
| References | Chu et al., 2017;Chen et al., 2017a |