Detailed infomation of each circRNA
General Information | |
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CircRNA Name | Zm00001d037867_circ_g.9 |
ID in PlantcircBase | zma_circ_002338 |
Alias | circ1092 |
Organism | Zea mays |
Position | chr6: 140375965-140376950 JBrowse» |
Reference genome | AGPv4.38 |
Type | ui-circRNA |
Identification method | CIRI |
Parent gene | Zm00001d037867 |
Parent gene annotation |
protein_coding |
Parent gene strand | + |
Alternative splicing | Zm00001d037867_circ_g.1 Zm00001d037867_circ_g.2 Zm00001d037867_circ_g.3 Zm00001d037867_circ_g.4 Zm00001d037867_circ_g.5 Zm00001d037867_circ_g.6 Zm00001d037867_circ_g.7 Zm00001d037867_circ_g.8 |
Support reads | 3 |
Tissues | seedling leaves |
Exon boundary | No-Yes |
Splicing signals | GT-CA |
Number of exons covered | Zm00001d037867_T009:4 Zm00001d037867_T015:4 Zm00001d037867_T022:4 Zm00001d037867_T008:4 Zm00001d037867_T030:4 Zm00001d037867_T005:4 Zm00001d037867_T003:4 Zm00001d037867_T013:4 Zm00001d037867_T029:4 Zm00001d037867_T026:4 Zm00001d037867_T001:4 Zm00001d037867_T021:4 Zm00001d037867_T007:4 Zm00001d037867_T031:4 Zm00001d037867_T028:4 Zm00001d037867_T002:4 Zm00001d037867_T004:4 |
Conservation Information | |
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Conserved circRNAs | NA |
PMCS | 0.307024611 |
Functional Information | |
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Coding potential | N |
Potential coding position |
NA |
Potential amino acid sequence |
NA |
Sponge-miRNAs | NA |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | NA |
Other Information | |
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References | Chen et al., 2017b |