Detailed infomation of each circRNA
General Information | |
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CircRNA Name | Os04g0548100_circ_ig.8 |
ID in PlantcircBase | osa_circ_024762 |
Alias | Os_ciR9489 |
Organism | Oryza sativa |
Position | chr4: 27451069-27451243 JBrowse» |
Reference genome | IRGSP-1.0.38 |
Type | ig-circRNA |
Identification method | CIRCexplorer, find_circ |
Parent gene | NA |
Parent gene annotation | NA |
Parent gene strand | NA |
Alternative splicing | Os04g0548100_circ_ig.2 Os04g0548100_circ_ig.3 Os04g0548100_circ_ig.4 Os04g0548100_circ_ig.5 Os04g0548100_circ_ig.6 Os04g0548100_circ_ig.7 Os04g0548100_circ_ig.9 Os04g0548100_circ_ig.10 Os04g0548100_circ_ig.11 Os04g0548100_circ_ig.12 |
Support reads | 2/1 |
Tissues | root/root |
Exon boundary | No-No |
Splicing signals | GT-AG |
Number of exons covered | NA |
Conservation Information | |
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Conserved circRNAs | NA |
PMCS | 0.251427857 |
Functional Information | |
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Coding potential | N |
Potential coding position |
NA |
Potential amino acid sequence |
NA |
Sponge-miRNAs | NA |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | NA |
Other Information | |
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References | Ye et al., 2015;Chu et al., 2017 |