Plant Circular RNA Database

Detail information of Zm00001d045574_circ_g.6

			
						 General Information
					
						CircRNA Name
						Zm00001d045574_circ_g.6
					
						ID in PlantcircBase
						zma_circ_009897
					
						Alias
						zma_circ_0003184
					
						Organism
						
							Zea mays						
					
						Position
						
							chr9: 27077288-27081858  JBrowse»						
					
						Reference genome
						
							AGPv4.38						
					
						Type  
						
							u-circRNA							
									
						Identification method
						find_circ
					
						Parent gene
						
							Zm00001d045574						
					
						Parent gene annotation
						
							Sec14p-like phosphatidylinositol transfer family protein
							
						Parent gene strand
						+
					
						Alternative splicing
						
							Zm00001d045573_circ_ag.1 Zm00001d045573_circ_ag.2 Zm00001d045573_circ_ag.3 Zm00001d045573_circ_ag.4 Zm00001d045573_circ_ag.5 Zm00001d045573_circ_ag.6 Zm00001d045573_circ_ag.7 Zm00001d045573_circ_ag.8 Zm00001d045574_circ_g.1 Zm00001d045574_circ_g.2 Zm00001d045574_circ_g.3 Zm00001d045574_circ_g.4 Zm00001d045574_circ_g.5 Zm00001d045574_circ_g.7 Zm00001d045574_circ_g.8 Zm00001d045574_circ_g.9 Zm00001d045574_circ_g.10 Zm00001d045574_circ_g.11 Zm00001d045574_circ_g.12 Zm00001d045574_circ_g.13 Zm00001d045574_circ_g.14 						
					
						Support reads
						NA
					
						Tissues
						leaf, root
					
						Exon boundary  
						
							Yes-Yes							"Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.

						Splicing signals  
						
							GT-AG							The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.

						Number of exons covered
						Zm00001d045574_T005:3
Zm00001d045574_T014:3
Zm00001d045574_T002:6
Zm00001d045574_T019:5
Zm00001d045574_T007:5
Zm00001d045574_T015:3
Zm00001d045574_T013:4
Zm00001d045574_T022:5
Zm00001d045574_T012:3
Zm00001d045574_T009:5
Zm00001d045574_T023:4
Zm00001d045574_T008:3
Zm00001d045574_T003:6
Zm00001d045574_T020:5
Zm00001d045574_T017:5
Zm00001d045574_T010:5
Zm00001d045574_T011:3
Zm00001d045574_T018:5
Zm00001d045574_T001:3
Zm00001d045574_T021:4
Zm00001d045574_T004:2
Zm00001d045574_T006:4
Zm00001d045574_T016:4

General Information
CircRNA Name	Zm00001d045574_circ_g.6
ID in PlantcircBase	zma_circ_009897
Alias	zma_circ_0003184
Organism	Zea mays
Position	chr9: 27077288-27081858 JBrowse»
Reference genome	AGPv4.38
Type	u-circRNA
Identification method	find_circ
Parent gene	Zm00001d045574
Parent gene annotation	Sec14p-like phosphatidylinositol transfer family protein
Parent gene strand	+
Alternative splicing	Zm00001d045573_circ_ag.1 Zm00001d045573_circ_ag.2 Zm00001d045573_circ_ag.3 Zm00001d045573_circ_ag.4 Zm00001d045573_circ_ag.5 Zm00001d045573_circ_ag.6 Zm00001d045573_circ_ag.7 Zm00001d045573_circ_ag.8 Zm00001d045574_circ_g.1 Zm00001d045574_circ_g.2 Zm00001d045574_circ_g.3 Zm00001d045574_circ_g.4 Zm00001d045574_circ_g.5 Zm00001d045574_circ_g.7 Zm00001d045574_circ_g.8 Zm00001d045574_circ_g.9 Zm00001d045574_circ_g.10 Zm00001d045574_circ_g.11 Zm00001d045574_circ_g.12 Zm00001d045574_circ_g.13 Zm00001d045574_circ_g.14
Support reads	NA
Tissues	leaf, root
Exon boundary	Yes-Yes "Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.
Splicing signals	GT-AG The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.
Number of exons covered	Zm00001d045574_T005:3 Zm00001d045574_T014:3 Zm00001d045574_T002:6 Zm00001d045574_T019:5 Zm00001d045574_T007:5 Zm00001d045574_T015:3 Zm00001d045574_T013:4 Zm00001d045574_T022:5 Zm00001d045574_T012:3 Zm00001d045574_T009:5 Zm00001d045574_T023:4 Zm00001d045574_T008:3 Zm00001d045574_T003:6 Zm00001d045574_T020:5 Zm00001d045574_T017:5 Zm00001d045574_T010:5 Zm00001d045574_T011:3 Zm00001d045574_T018:5 Zm00001d045574_T001:3 Zm00001d045574_T021:4 Zm00001d045574_T004:2 Zm00001d045574_T006:4 Zm00001d045574_T016:4

			
						 Experimental Information
					
						Sanger sequencing for BSS  
						
							NA							Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".

						PCR primers for BSS   
						
							NA							PCR primers used in back-splicing site (BSS) validation.

						Sanger sequencing for FL   
						
							NA							Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.

						PCR primers for FL   
						
							NA							 PCR primers used in full-length (FL) sequence validation.

Experimental Information
Sanger sequencing for BSS	NA Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".
PCR primers for BSS	NA PCR primers used in back-splicing site (BSS) validation.
Sanger sequencing for FL	NA Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.
PCR primers for FL	NA PCR primers used in full-length (FL) sequence validation.

			
				
						 Sequences
					

				
						Splice junction sequence  
						
							AGTCAGCAGACTTCCGCCAGGAGTAGAGAATATACTTGGGATCTTTGATCTGCGAGGCTTTCGG
GTTGAAAATGGTGATCTCCAGTTCCTAAAGTTTTTGatggacgttttttactattactacccga
agcggcttggccaagttctttttgtcgatgctccatttgtttttcaaccaatgtggcaggttgt
taaacctc

									
								

					

						Assembled circRNA sequence  
						
							NA
The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).

					

						Full-length trsnacripts
						
							NA						
					

						Genomic sequence
						
							ATGGACGTTTTTTACTATTACTACCCGAAGCGGCTTGGCCAAGTTCTTTTTGTCGATGCTCCAT
TTGTTTTTCAACCAATGTGGCAGGTTGTTAAACCTCTATTGAAATCATATGCCTCCCTGGTATG
CTCTCCCTCTCTCTTAGGTTAGCGCTTCATCGAACGATATGGAACGATATGGATAACCTTACAG
TCTACTGCTATGTTGCCCCTGCTAGGTAAGATTTTGTGATGCCGAGACTGTGAGGAAGGAATAC
TTCAAAGAAGAAACGGTGCCTCCTGATTTCCGCGATTAGGTGACATGATTATTTCTTCAGTAAT
TGCAAGGCAGTTCTACCTCTGCCTTTGTGTAACGATTGAAATTCTAAATTGTGCAGATTATTTT
TAGTTCTTCCAATCCCTCCTAAAAGCTATTTTGCAGAAATGTGCAGGTGGTCTCGGAAACATGA
CCTTTAATTGATTCAGAATCGATTGGCACCCAGGGGGGCTGGCGCCTTCCTATACCTTTTGATT
AACTTCTCAAAAGTTGCTCAGACGGCAGCAAACGATTGGAGAGTCCAGTAAAAAATGACCCTGT
ACTTGTATAACTTCTGCGAAGTAGAATGCTGAGTTTAGGCTGGTGTCTGGAGTGCTCCTGTACC
ATATTTTTCTGGTTTTGGATGAAGCTATATGGACCAAATTCATCTCTGTTGAACAATTGCCAAT
TACATAACTTGTGTTTGCCCAATTCCATGGTGTAGTACCATAACTTCTCAGTGCAGTGCAGACA
ACACATGGATTCCATTTTTTGATTAAAGTATCATCTGCTACAAATATGAATCATGGCTTAGTTT
GTAGACTTCATAAAGAAACACACAGATTAATCAAACCAGTCTTCGAAGAGTCTCTGTGGATAGG
AACGTTCCAAAGCAAAGTAAGATGCAAGTTGTATTGCATAAAAACCAGGTACACATCAATCAGC
TGCATTCTGGAAGACTAAACTGCAACACAACTACATCTGCAATCACAGAGAAATCAGGTATACG
ACCAATTGTTATCTATTGTAAATATTTTGTTTTTTAGGTCAACAACGGAGAGGGTCAAGCGATC
CCCACGTACAGATGCCAGCATGGTCTTTTACATGGTTCCAAGAGGAGGTAAATCGAGTGTAGCC
CTAAAAAGATCTGCCTTGTGCCACTTCAACACTTTAACCCAGATGCAATAAAAAAACACTTTAA
CCCAGATGCTGCATTGTGGTGTGGCAAAGGCTTGAGAATATGACAATAACAGCTGCTCAAAAAC
TGTTGGTAGGAACATTTATAGCAGCAAAAGAACAAAATGGAATGTGTGGTTTCTTATCTGCCTT
AGATGAGATAAGATTTCGGACATGTGTATTCATGTTTTCGAGTGATTTGGCACTATGAATGCGC
TAGATGGTTGGTTGCTTTTTTTTGTTAATTGCTCAGGTGATATATGCTGTATTTCTAGTCACTA
GTGTTGTATTGTTTGTGCTTGTGCTAAGATGATCTCTTTTGCACTTGTAACAGGGGCTCATTCA
AGTACTCTACTGATCGAAAATGGATGGCGTCTGTGATGGTTCATTCTTTTGCACGTCTTCTACA
CGGGTACATTGACGGTTGATGGAGATGGATGGTGGTGTAGCTGTTTTGTTTAGCAATTAGCACT
CTAGGTGTTGGACCACTGTTTTGTTAATGGATGCTATGTAACAGTAGTATGTAACTAATGTGAA
CTTGTTTAGGTTGCTGTGAAACTGTTATACAACACATTGTTATGGGGTTGTTACACAGCTGATA
TGTTATGAACATGATATGGAGATATCTTTTCCTTTTTGGTTTGGGTTTTACTGTTGTGCCATTC
GTCTCATAAGTTATGCCATTTTATTATTTACTTTTGGATTGATATATATTCGTCTCTGAAGCCT
TCCTTCACTACAATATGTCTCTGTCATCAACGTATCCACTGGCTGAGACACGAAGCCGTGGATA
GCTTCCTTTATGGCCGTGTCCACGCTTCCGCATCTCATATTTTTTCTTATCAAAAGATGCATCG
ACGTTCACCATCACTTTTCCCTCAGGAGGTTTCTATCATCCGTGCTGTATTTTTGTTTCTTTGT
TCCTTGTTTGTTGCTAGCTTGGAGTAATTTCTTTGTAGAGCTGGAGCTCCCCAGCAATGTCCTT
AATATTAACGGCCTCTTTAATCTGAAAACGGAAAAATAAAGAAGAGAGAAACGGGAGAAGAAGA
AAGAAAGGATGGAGAGCAAGTGGGTCCTGTGGCATGGAGGAACATGGAGCACAGAAAAGAGTAG
TAATATAATGTGATGGAACGGCCGGAATTGAGATGGTGCTCATAAGATACGGTGTCGTGGAGGG
AAACCGTTCCACCCATCTCAATGACACCGTATCTTATGAGCAAGGAGCCCTGCTGCTCCCATGA
GCAAAATCAATCCAGACCACATCCTCCACATCCAACGGTGCTGCGTTAGGGGGGTTTTGTAAAA
TGTACAGAGTTGCAAAGAACATTTTACAAAACCCCCTGATATAGCACCGTTGGATGTGGAGGGT
GTGGTCTGGATTGATTTTGCTCATGGGAGCACCAACGCTCTTTGCGCACAAGATACGTTCTCTC
CCTCCACAACCACTTGCTCCTCATCTACTTTTCTCCTCCGCCTTCCACTCATCCTTGCTCCTGC
CTGCCGTCGTGCATCATCATCTCCGGCCAGGGCCAGGGCATTCGTCTCCGCCTCCGGTCCGGCC
TCCTCCACACCGCGCCCCCCCCCCCCCCCAGACGCGTCGCTGCGTAGCTGCTGGCCGCCATGGC
CACCGTCATGGCCGCGGCCGTCTAGTCCTTCCCGTCCTCCTCGGCCGTCGTCGCCAAGGCGTCG
CCGGCGTCCCCCTGTGCCGCCCCGCACTTCCGCCCGAGGGCCGTGCGGGCCGCTATCCGGGCGC
AGGCGTCCGCCGTCGAGGCGCCCGCCACGGCCAAGGCCAAGAAGGAGTCCAAGAAGCAGGAGGA
GGGCGTCGTCACCAACCTATACAAGCCCAAGGAGCCGTACGTCGGCAGGTGCCTCCTCAACACC
AAGATCACCGGCGACGACGCGCCGGGGGAGACGTGGCACATGGTCTTCAGCACCGAAGGTAGGT
ACTGAGGTTAAAAAAAAAATCTGATTTTTGCTGCCTTGTTCGTTCGTTCAATTGCTGTATTCGT
ATCGTATGTATATACGCTGATGGACGCACGTACGCAGGCCCTTCTTTGCCTGCGCGAGGTCTCA
GAATCCGGGGGGAAAAGAAAAGAAAAGAAAAGATGATGACTGTCTCTACCTCTTGCTACATGTG
CCGCTCCCTCGTCCGGGCTCCTCCGCTCAAGTCCAGGAGTGCAGTGCGCTGTCCAAGCGCCGCC
CCGCCAGGTGCTAGCGGTGCCACCTCCACCTCCAAGGTAAACCCACACCTACTACCTGTGTGCT
TCGTAAGGTCTATCTACACCTATAGGCTGCAGCCACCAGCACAGGAATATGTACTAGCCTGCTC
GTTTCAGTTGGAACAGTATTCTCCAGTTTTGGATTGGAACATGCAGCCACAGCCAAAAGTAGCT
GAAGCGATTGGAGTTGTAGCTTTTCGGGGATAATCAAATGATAGGAGAGTGGAGGTGGTAGATC
ATGTGTAAGCTTTAGACTACTGACTGATTCACTTGTCTATCCGGCGCTGGTTGCTTTCCCTGTG
TGAAGCTTGTCCTAGAGGTGAAAGAACGGCTAGCAAGGGAGCACCCAGGCCTCCCCACGGGCAG
GAACGGGAGGGACGATGACGACATGGTCCTCTGGTTCCTAAAGGACCGCAAGTTCTCCGTCGAT
GAAGCCGTCTCCAAGCTCACCAAGGCGATTGTATCCTCTAATTCACTCGCTTGTAGCAGTGAAG
CTCACACCTAATATATAGCTTCTTTACTGGCTCACTAAATTCCTGGTATGGTAACCGAGTTCAT
ATAGCACTGCTATCTTCAGTTTTCCTTTCAACTGCATTAGAAATGGCGTCAGGACTTTGGTGTT
GCAGAGTTATCAGAGGAATCAGTGAAAAGCCTGTACCAAACTGGCAAGGCATATGTACATGATT
CCTTGGACATTTATGGCCGACCTGTGCTGATTGTAGTGGCAGCCAAACATTTTCCTTCGGTGCG
TTCCGTTTGTTTCCCAATCTTGATTTGGAAATGCTCAACAGGATAGTGGCTACACACTGTTTCC
AGTTTTTTAGAATAGTACACATAACAAAGGCTGACAGTATGCAGTGGAAAGTATCAGTACTTCA
CACCTCATAGCAGCTCTAAAATTAAACTACATGGCTTGGCTAGCTGACCTGTAACCTATGGATG
TCTTAGTATTCAACATGCATTTGTTCTTCATAATAATGATGATCCATGTATAATATGCTACTGC
AGACACAGGATCCAGTTGGAAACCAGAAGTTGTGTGCCTATTTGGTTGAGAAGGCAGTCAGCAG
ACTTCCGCCAGGAGTAGAGAATATACTTGGGATCTTTGATCTGCGAGGCTTTCGGGTTGAAAAT
GGTGATCTCCAGTTCCTAAAGTTTTTG
						
					

			
		

Sequences
Splice junction sequence	AGTCAGCAGACTTCCGCCAGGAGTAGAGAATATACTTGGGATCTTTGATCTGCGAGGCTTTCGG GTTGAAAATGGTGATCTCCAGTTCCTAAAGTTTTTGatggacgttttttactattactacccga agcggcttggccaagttctttttgtcgatgctccatttgtttttcaaccaatgtggcaggttgt taaacctc
Assembled circRNA sequence	NA The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).
Full-length trsnacripts	NA
Genomic sequence	ATGGACGTTTTTTACTATTACTACCCGAAGCGGCTTGGCCAAGTTCTTTTTGTCGATGCTCCAT TTGTTTTTCAACCAATGTGGCAGGTTGTTAAACCTCTATTGAAATCATATGCCTCCCTGGTATG CTCTCCCTCTCTCTTAGGTTAGCGCTTCATCGAACGATATGGAACGATATGGATAACCTTACAG TCTACTGCTATGTTGCCCCTGCTAGGTAAGATTTTGTGATGCCGAGACTGTGAGGAAGGAATAC TTCAAAGAAGAAACGGTGCCTCCTGATTTCCGCGATTAGGTGACATGATTATTTCTTCAGTAAT TGCAAGGCAGTTCTACCTCTGCCTTTGTGTAACGATTGAAATTCTAAATTGTGCAGATTATTTT TAGTTCTTCCAATCCCTCCTAAAAGCTATTTTGCAGAAATGTGCAGGTGGTCTCGGAAACATGA CCTTTAATTGATTCAGAATCGATTGGCACCCAGGGGGGCTGGCGCCTTCCTATACCTTTTGATT AACTTCTCAAAAGTTGCTCAGACGGCAGCAAACGATTGGAGAGTCCAGTAAAAAATGACCCTGT ACTTGTATAACTTCTGCGAAGTAGAATGCTGAGTTTAGGCTGGTGTCTGGAGTGCTCCTGTACC ATATTTTTCTGGTTTTGGATGAAGCTATATGGACCAAATTCATCTCTGTTGAACAATTGCCAAT TACATAACTTGTGTTTGCCCAATTCCATGGTGTAGTACCATAACTTCTCAGTGCAGTGCAGACA ACACATGGATTCCATTTTTTGATTAAAGTATCATCTGCTACAAATATGAATCATGGCTTAGTTT GTAGACTTCATAAAGAAACACACAGATTAATCAAACCAGTCTTCGAAGAGTCTCTGTGGATAGG AACGTTCCAAAGCAAAGTAAGATGCAAGTTGTATTGCATAAAAACCAGGTACACATCAATCAGC TGCATTCTGGAAGACTAAACTGCAACACAACTACATCTGCAATCACAGAGAAATCAGGTATACG ACCAATTGTTATCTATTGTAAATATTTTGTTTTTTAGGTCAACAACGGAGAGGGTCAAGCGATC CCCACGTACAGATGCCAGCATGGTCTTTTACATGGTTCCAAGAGGAGGTAAATCGAGTGTAGCC CTAAAAAGATCTGCCTTGTGCCACTTCAACACTTTAACCCAGATGCAATAAAAAAACACTTTAA CCCAGATGCTGCATTGTGGTGTGGCAAAGGCTTGAGAATATGACAATAACAGCTGCTCAAAAAC TGTTGGTAGGAACATTTATAGCAGCAAAAGAACAAAATGGAATGTGTGGTTTCTTATCTGCCTT AGATGAGATAAGATTTCGGACATGTGTATTCATGTTTTCGAGTGATTTGGCACTATGAATGCGC TAGATGGTTGGTTGCTTTTTTTTGTTAATTGCTCAGGTGATATATGCTGTATTTCTAGTCACTA GTGTTGTATTGTTTGTGCTTGTGCTAAGATGATCTCTTTTGCACTTGTAACAGGGGCTCATTCA AGTACTCTACTGATCGAAAATGGATGGCGTCTGTGATGGTTCATTCTTTTGCACGTCTTCTACA CGGGTACATTGACGGTTGATGGAGATGGATGGTGGTGTAGCTGTTTTGTTTAGCAATTAGCACT CTAGGTGTTGGACCACTGTTTTGTTAATGGATGCTATGTAACAGTAGTATGTAACTAATGTGAA CTTGTTTAGGTTGCTGTGAAACTGTTATACAACACATTGTTATGGGGTTGTTACACAGCTGATA TGTTATGAACATGATATGGAGATATCTTTTCCTTTTTGGTTTGGGTTTTACTGTTGTGCCATTC GTCTCATAAGTTATGCCATTTTATTATTTACTTTTGGATTGATATATATTCGTCTCTGAAGCCT TCCTTCACTACAATATGTCTCTGTCATCAACGTATCCACTGGCTGAGACACGAAGCCGTGGATA GCTTCCTTTATGGCCGTGTCCACGCTTCCGCATCTCATATTTTTTCTTATCAAAAGATGCATCG ACGTTCACCATCACTTTTCCCTCAGGAGGTTTCTATCATCCGTGCTGTATTTTTGTTTCTTTGT TCCTTGTTTGTTGCTAGCTTGGAGTAATTTCTTTGTAGAGCTGGAGCTCCCCAGCAATGTCCTT AATATTAACGGCCTCTTTAATCTGAAAACGGAAAAATAAAGAAGAGAGAAACGGGAGAAGAAGA AAGAAAGGATGGAGAGCAAGTGGGTCCTGTGGCATGGAGGAACATGGAGCACAGAAAAGAGTAG TAATATAATGTGATGGAACGGCCGGAATTGAGATGGTGCTCATAAGATACGGTGTCGTGGAGGG AAACCGTTCCACCCATCTCAATGACACCGTATCTTATGAGCAAGGAGCCCTGCTGCTCCCATGA GCAAAATCAATCCAGACCACATCCTCCACATCCAACGGTGCTGCGTTAGGGGGGTTTTGTAAAA TGTACAGAGTTGCAAAGAACATTTTACAAAACCCCCTGATATAGCACCGTTGGATGTGGAGGGT GTGGTCTGGATTGATTTTGCTCATGGGAGCACCAACGCTCTTTGCGCACAAGATACGTTCTCTC CCTCCACAACCACTTGCTCCTCATCTACTTTTCTCCTCCGCCTTCCACTCATCCTTGCTCCTGC CTGCCGTCGTGCATCATCATCTCCGGCCAGGGCCAGGGCATTCGTCTCCGCCTCCGGTCCGGCC TCCTCCACACCGCGCCCCCCCCCCCCCCCAGACGCGTCGCTGCGTAGCTGCTGGCCGCCATGGC CACCGTCATGGCCGCGGCCGTCTAGTCCTTCCCGTCCTCCTCGGCCGTCGTCGCCAAGGCGTCG CCGGCGTCCCCCTGTGCCGCCCCGCACTTCCGCCCGAGGGCCGTGCGGGCCGCTATCCGGGCGC AGGCGTCCGCCGTCGAGGCGCCCGCCACGGCCAAGGCCAAGAAGGAGTCCAAGAAGCAGGAGGA GGGCGTCGTCACCAACCTATACAAGCCCAAGGAGCCGTACGTCGGCAGGTGCCTCCTCAACACC AAGATCACCGGCGACGACGCGCCGGGGGAGACGTGGCACATGGTCTTCAGCACCGAAGGTAGGT ACTGAGGTTAAAAAAAAAATCTGATTTTTGCTGCCTTGTTCGTTCGTTCAATTGCTGTATTCGT ATCGTATGTATATACGCTGATGGACGCACGTACGCAGGCCCTTCTTTGCCTGCGCGAGGTCTCA GAATCCGGGGGGAAAAGAAAAGAAAAGAAAAGATGATGACTGTCTCTACCTCTTGCTACATGTG CCGCTCCCTCGTCCGGGCTCCTCCGCTCAAGTCCAGGAGTGCAGTGCGCTGTCCAAGCGCCGCC CCGCCAGGTGCTAGCGGTGCCACCTCCACCTCCAAGGTAAACCCACACCTACTACCTGTGTGCT TCGTAAGGTCTATCTACACCTATAGGCTGCAGCCACCAGCACAGGAATATGTACTAGCCTGCTC GTTTCAGTTGGAACAGTATTCTCCAGTTTTGGATTGGAACATGCAGCCACAGCCAAAAGTAGCT GAAGCGATTGGAGTTGTAGCTTTTCGGGGATAATCAAATGATAGGAGAGTGGAGGTGGTAGATC ATGTGTAAGCTTTAGACTACTGACTGATTCACTTGTCTATCCGGCGCTGGTTGCTTTCCCTGTG TGAAGCTTGTCCTAGAGGTGAAAGAACGGCTAGCAAGGGAGCACCCAGGCCTCCCCACGGGCAG GAACGGGAGGGACGATGACGACATGGTCCTCTGGTTCCTAAAGGACCGCAAGTTCTCCGTCGAT GAAGCCGTCTCCAAGCTCACCAAGGCGATTGTATCCTCTAATTCACTCGCTTGTAGCAGTGAAG CTCACACCTAATATATAGCTTCTTTACTGGCTCACTAAATTCCTGGTATGGTAACCGAGTTCAT ATAGCACTGCTATCTTCAGTTTTCCTTTCAACTGCATTAGAAATGGCGTCAGGACTTTGGTGTT GCAGAGTTATCAGAGGAATCAGTGAAAAGCCTGTACCAAACTGGCAAGGCATATGTACATGATT CCTTGGACATTTATGGCCGACCTGTGCTGATTGTAGTGGCAGCCAAACATTTTCCTTCGGTGCG TTCCGTTTGTTTCCCAATCTTGATTTGGAAATGCTCAACAGGATAGTGGCTACACACTGTTTCC AGTTTTTTAGAATAGTACACATAACAAAGGCTGACAGTATGCAGTGGAAAGTATCAGTACTTCA CACCTCATAGCAGCTCTAAAATTAAACTACATGGCTTGGCTAGCTGACCTGTAACCTATGGATG TCTTAGTATTCAACATGCATTTGTTCTTCATAATAATGATGATCCATGTATAATATGCTACTGC AGACACAGGATCCAGTTGGAAACCAGAAGTTGTGTGCCTATTTGGTTGAGAAGGCAGTCAGCAG ACTTCCGCCAGGAGTAGAGAATATACTTGGGATCTTTGATCTGCGAGGCTTTCGGGTTGAAAAT GGTGATCTCCAGTTCCTAAAGTTTTTG

			
						 Conservation Information
					
						Conserved circRNAs
						
							NA						
					
						PMCS
						0.952974614

Conservation Information
Conserved circRNAs	NA
PMCS	0.952974614

			
						 Functional Information
					
						Coding potential
						Y
					
						Potential coding position
						
							27077289-27081855(+)
27077353-27081763(-)
						
						Potential amino acid sequence
						
							MDVFYYYYPKRLGQVLFVDAPFVFQPMWQVVKPLLKSYASLVHINQLHSGRLNCNTTTSAITEK
SGQQRRGSSDPHVQMPAWSFTWFQEESFPSSSAVVAKASPASPCAAPHFRPRAVRAAIRAQASA
VEAPATAKAKKESKKQEEGVVTNLYKPKEPYVGRCLLNTKITGDDAPGETWHMVFSTEGPSLPA
RGLRIRGEKKRKEKMMTVSTSCYMCRSLVRAPPLKSRSATQDPVGNQKLCAYLVEKAVSRLPPG
VENILGIFDLRGFRVENGDLQFLKFLMDVFYYYYPKRLGQVLFVDAPFVFQPMWQVVKPLLKSY
ASLVHINQLHSGRLNCNTTTSAITEKSGQQRRGSSDPHVQMPAWSFTWFQEESFPSSSAVVAKA
SPASPCAAPHFRPRAVRAAIRAQASAVEAPATAKAKKESKKQEEGVVTNLYKPKEPYVGRCLLN
TKITGDDAPGETWHMVFSTEGPSLPARGLRIRGEKKRKEKMMTVSTSCYMCRSLVRAPPLKSRS
ATQDPVGNQKLCAYLVEKAVSRLPPGVENILGIFDLRGFRVENGDLQFLKFLMDVFYYYYPKRL
GQVLFVDAPFVFQPMWQVVKPLLKSYASLVHINQLHSGRLNCNTTTSAITEKSGQQRRGSSDPH
VQMPAWSFTWFQEESFPSSSAVVAKASPASPCAAPHFRPRAVRAAIRAQASAVEAPATAKAKKE
SKKQEEGVVTNLYKPKEPYVGRCLLNTKITGDDAPGETWHMVFSTEGPSLPARGLRIRGEKKRK
EKMMTVSTSCYMCRSLVRAPPLKSRSATQDPVGNQKLCAYLVEKAVSRLPPGVENILGIFDLRG
FRVENGDLQFLKFLMDVFYYYYPKRLGQVLFVDAPFVFQPMWQVVKPLLKSYASLVHINQLHSG
RLNCNTTTSAITEKSGQQRRGSSDPHVQMPAWSFTWFQEESFPSSSAVVAKASPASPCAAPHFR
PRAVRAAIRAQASAVEAPATAKAKKESKKQEEGVVTNLYKPKEPYVGRCLLNTKITGDDAPGET
WHMVFSTEGPSLPARGLRIRGEKKRKEKMMTVSTSCYMCRSLVRAPPLKSRSATQDPVGNQKLC
AYLVEKAVSRLPPGVENILGIFDLRGFRVENGDLQFLKFL(+)
MEHRQKELGQAASGSNSKKRPSKTLGTGDHHFQPESLADQRSQVYSLLLAEVC*(-)
						
						Sponge-miRNAs
						
							NA						
					
						circRNA-miRNA-mRNA network
						 VISUALIZATION
					
						Potential function description
						NA

Functional Information
Coding potential	Y
Potential coding position	27077289-27081855(+) 27077353-27081763(-)
Potential amino acid sequence	MDVFYYYYPKRLGQVLFVDAPFVFQPMWQVVKPLLKSYASLVHINQLHSGRLNCNTTTSAITEK SGQQRRGSSDPHVQMPAWSFTWFQEESFPSSSAVVAKASPASPCAAPHFRPRAVRAAIRAQASA VEAPATAKAKKESKKQEEGVVTNLYKPKEPYVGRCLLNTKITGDDAPGETWHMVFSTEGPSLPA RGLRIRGEKKRKEKMMTVSTSCYMCRSLVRAPPLKSRSATQDPVGNQKLCAYLVEKAVSRLPPG VENILGIFDLRGFRVENGDLQFLKFLMDVFYYYYPKRLGQVLFVDAPFVFQPMWQVVKPLLKSY ASLVHINQLHSGRLNCNTTTSAITEKSGQQRRGSSDPHVQMPAWSFTWFQEESFPSSSAVVAKA SPASPCAAPHFRPRAVRAAIRAQASAVEAPATAKAKKESKKQEEGVVTNLYKPKEPYVGRCLLN TKITGDDAPGETWHMVFSTEGPSLPARGLRIRGEKKRKEKMMTVSTSCYMCRSLVRAPPLKSRS ATQDPVGNQKLCAYLVEKAVSRLPPGVENILGIFDLRGFRVENGDLQFLKFLMDVFYYYYPKRL GQVLFVDAPFVFQPMWQVVKPLLKSYASLVHINQLHSGRLNCNTTTSAITEKSGQQRRGSSDPH VQMPAWSFTWFQEESFPSSSAVVAKASPASPCAAPHFRPRAVRAAIRAQASAVEAPATAKAKKE SKKQEEGVVTNLYKPKEPYVGRCLLNTKITGDDAPGETWHMVFSTEGPSLPARGLRIRGEKKRK EKMMTVSTSCYMCRSLVRAPPLKSRSATQDPVGNQKLCAYLVEKAVSRLPPGVENILGIFDLRG FRVENGDLQFLKFLMDVFYYYYPKRLGQVLFVDAPFVFQPMWQVVKPLLKSYASLVHINQLHSG RLNCNTTTSAITEKSGQQRRGSSDPHVQMPAWSFTWFQEESFPSSSAVVAKASPASPCAAPHFR PRAVRAAIRAQASAVEAPATAKAKKESKKQEEGVVTNLYKPKEPYVGRCLLNTKITGDDAPGET WHMVFSTEGPSLPARGLRIRGEKKRKEKMMTVSTSCYMCRSLVRAPPLKSRSATQDPVGNQKLC AYLVEKAVSRLPPGVENILGIFDLRGFRVENGDLQFLKFL(+) MEHRQKELGQAASGSNSKKRPSKTLGTGDHHFQPESLADQRSQVYSLLLAEVC*(-)
Sponge-miRNAs	NA
circRNA-miRNA-mRNA network	VISUALIZATION
Potential function description	NA

			
						 Other Information
					
						References
						Ma et al., 2021b

circRNA

Detail information of Zm00001d045574_circ_g.6

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