Plant Circular RNA Database

Detail information of Zm00001d025044_circ_g.5

			
						 General Information
					
						CircRNA Name
						Zm00001d025044_circ_g.5
					
						ID in PlantcircBase
						zma_circ_010268
					
						Alias
						zma_circ_0000003
					
						Organism
						
							Zea mays						
					
						Position
						
							chr10: 101422294-101426032  JBrowse»						
					
						Reference genome
						
							AGPv4.38						
					
						Type  
						
							u-circRNA							
									
						Identification method
						find_circ
					
						Parent gene
						
							Zm00001d025044						
					
						Parent gene annotation
						
							Vacuolar protein sorting-associated protein 54 chloroplastic
							
						Parent gene strand
						+
					
						Alternative splicing
						
							Zm00001d025044_circ_g.2 Zm00001d025044_circ_g.3 Zm00001d025044_circ_g.4 Zm00001d025044_circ_g.6 Zm00001d025044_circ_g.7 Zm00001d025044_circ_g.8 Zm00001d025044_circ_g.9 						
					
						Support reads
						NA
					
						Tissues
						leaf, root
					
						Exon boundary  
						
							Yes-Yes							"Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.

						Splicing signals  
						
							GT-AG							The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.

						Number of exons covered
						Zm00001d025044_T010:5
Zm00001d025044_T003:5
Zm00001d025044_T008:5
Zm00001d025044_T005:5
Zm00001d025044_T029:5
Zm00001d025044_T034:5
Zm00001d025044_T027:5
Zm00001d025044_T021:5
Zm00001d025044_T019:5
Zm00001d025044_T035:5
Zm00001d025044_T002:5
Zm00001d025044_T039:5
Zm00001d025044_T015:5
Zm00001d025044_T013:5
Zm00001d025044_T017:5
Zm00001d025044_T030:5
Zm00001d025044_T023:5
Zm00001d025044_T012:5
Zm00001d025044_T038:5
Zm00001d025044_T037:5
Zm00001d025044_T004:5
Zm00001d025044_T040:3
Zm00001d025044_T025:5

General Information
CircRNA Name	Zm00001d025044_circ_g.5
ID in PlantcircBase	zma_circ_010268
Alias	zma_circ_0000003
Organism	Zea mays
Position	chr10: 101422294-101426032 JBrowse»
Reference genome	AGPv4.38
Type	u-circRNA
Identification method	find_circ
Parent gene	Zm00001d025044
Parent gene annotation	Vacuolar protein sorting-associated protein 54 chloroplastic
Parent gene strand	+
Alternative splicing	Zm00001d025044_circ_g.2 Zm00001d025044_circ_g.3 Zm00001d025044_circ_g.4 Zm00001d025044_circ_g.6 Zm00001d025044_circ_g.7 Zm00001d025044_circ_g.8 Zm00001d025044_circ_g.9
Support reads	NA
Tissues	leaf, root
Exon boundary	Yes-Yes "Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.
Splicing signals	GT-AG The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.
Number of exons covered	Zm00001d025044_T010:5 Zm00001d025044_T003:5 Zm00001d025044_T008:5 Zm00001d025044_T005:5 Zm00001d025044_T029:5 Zm00001d025044_T034:5 Zm00001d025044_T027:5 Zm00001d025044_T021:5 Zm00001d025044_T019:5 Zm00001d025044_T035:5 Zm00001d025044_T002:5 Zm00001d025044_T039:5 Zm00001d025044_T015:5 Zm00001d025044_T013:5 Zm00001d025044_T017:5 Zm00001d025044_T030:5 Zm00001d025044_T023:5 Zm00001d025044_T012:5 Zm00001d025044_T038:5 Zm00001d025044_T037:5 Zm00001d025044_T004:5 Zm00001d025044_T040:3 Zm00001d025044_T025:5

			
						 Experimental Information
					
						Sanger sequencing for BSS  
						
							NA							Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".

						PCR primers for BSS   
						
							NA							PCR primers used in back-splicing site (BSS) validation.

						Sanger sequencing for FL   
						
							NA							Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.

						PCR primers for FL   
						
							NA							 PCR primers used in full-length (FL) sequence validation.

Experimental Information
Sanger sequencing for BSS	NA Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".
PCR primers for BSS	NA PCR primers used in back-splicing site (BSS) validation.
Sanger sequencing for FL	NA Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.
PCR primers for FL	NA PCR primers used in full-length (FL) sequence validation.

			
				
						 Sequences
					

				
						Splice junction sequence  
						
							TTCTGTTTTGCTTCTCAGGTGTCTGGACTTAAATCAATTACATCTAAGCATTTAGCTCTGGCGA
GTCAAATCATTAGTTTTATACATTCTTTAATTCCAGggctgatgtcttgagagaaaacactgaa
gcagttttcgcggcttgtgatgctgcccatggacgatgggctaagctactaggtgttcgtgctg
gattacat

									
								

					

						Assembled circRNA sequence  
						
							Yes
The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).

					

						Full-length trsnacripts
						
							Transcript length: 836
Transcript exons: 101422294-101422465,101422561-101422644,101423601-101423
944,101424214-101424367,101425951-101426032
GGCTGATGTCTTGAGAGAAAACACTGAAGCAGTTTTCGCGGCTTGTGATGCTGCCCATGGACGA
TGGGCTAAGCTACTAGGTGTTCGTGCTGGATTACATCCCAGGTTAAGGCTTGAAGAATTCTTGA
TCATCTACAGCATAACAGAAGAATTTATAGCTGCTACAGAAAAGATTGGAGGCAGGTTGGGTTA
CAACATTCGTGGAATCCTACAACAACAATCAAAGCAATTTGTTGATTATCAGCATAATGTTCGG
ATGACAAAAATCAAGGCAGTTCTTGACCAAGAGACGTGGGTTGCTGTGGATGTTCCTGAAGAGT
TTCAAGCAATCGTTCTTTCACTTTCATCCACTTACTCTTCTGTTAATGGCATGGAGATGCCTAG
CACTGATGATAACTCAAAGTTCAGTGATCATCAGCCTACAAGTCAAGAACTGACATATTCTGCT
GAAAATAATGCTGATAATGGCAAAGTAACATCCGGGACTGGTGAAAACCAGGTTGAATCCACTT
CTCAGAGTGCAAATAATGTTGCCGGGAATCTGAAATCCACCTTGCAAACAATTGTACATGGAGG
TGTTGGCTATCATATGGTAAACTGCGGTTTGATACTGTTGAAGATGTTATCTGAATATGTTGAC
ATCAGTAAATGTTTACCATCACTATCTTTGGAGGTGGTCCAACGTGTTGTGGAAATATTGAAGC
TTTTCAACACTAGGACTTGCCAACTTGTTCTCGGTGCAGGGGCCATGCAGGTGTCTGGACTTAA
ATCAATTACATCTAAGCATTTAGCTCTGGCGAGTCAAATCATTAGTTTTATACATTCTTTAATT
CCAG
						
					

						Genomic sequence
						
							GGCTGATGTCTTGAGAGAAAACACTGAAGCAGTTTTCGCGGCTTGTGATGCTGCCCATGGACGA
TGGGCTAAGCTACTAGGTGTTCGTGCTGGATTACATCCCAGGTTAAGGCTTGAAGAATTCTTGA
TCATCTACAGCATAACAGAAGAATTTATAGCTGCTACAGAAAAGGTTACATCTTCTTGTTTGGA
ATAAATACACAAAATCAGCTGCATTAATTGCATATAAGCAAGTTGTAATGTTATCTTAGCCTCT
TATTCTTGTAGATTGGAGGCAGGTTGGGTTACAACATTCGTGGAATCCTACAACAACAATCAAA
GCAATTTGTTGATTATCAGCATAATGTTCGGGTCAGTAAAACAATGTTACAGTTCTATTGTCGA
AGTTAAACCCTATTATTCAAATTTCACCTATTTGATTAGAAGCTTCCAAAATAATCATTGATCA
TCATTATTGGAAGGAACAAAAAGCACCCAACTTTCCCTTCTTAATTAGGGATGACTGGTTGTCC
ACCAAGCTGAATACAGCACATATGTTCAATTCAAGTATAACTTTGTACCCTTTTTTTACATTAA
CAGTAGTTGATCTTTACTGAAACTCCCCCTATTACAAATTATGAGTCATTCTAATTTTATAGGT
ATATAGTTTTGTTATTCTTCTAGATATATACTATGTCTAGATACTACTACCTCCGTCTTGAATA
TTTGTCGCCCTCTAATTTATTTTTGAACTAAAACGCGACAAATAAAAAAGAACTGAGGGAGTAG
TTTTTATTATGTATCTAGAAAAGCCAGAATGACTTATGACTTATAATTTGGAACAAATGGAGTG
TTTCTGAGATCAAAATGGTGGTGGAATGAAAGATTTTAATTAATGAAGTTCATCTTCTCTAGAT
ACTCAAATTATGTGAGTTTTGGATTATCCAAGGTTGCGAAAGGGCCTCCAGCCGAGTTGGTTAG
GTGGTCTGAGTAACACTCCTTAGGTCCTGGGTTCGACTCCCCGTAGGAGCGAATTTCAGGTTGC
GGTTAAAAAATCCCCTCGTCTGTCCCACGCCAAAGCACAGGTCTAAGTCTCAGCCCCGGTCGCG
GTCGTTCTCACATGGGCTTCGATGCCGCAGTGTATGGGTGAGACAGGGGTTCGGGGGTCCTTCG
ATCTGTGTGAGAAGGTCTTCTTCTTAATACAATACTCGGGGGCTGTCTTACCCCCCGCAGTTTT
TTTGGATTATCCAAGGTGCTTGATAGTTAGGGCTAGTTAAACTAAATTGTGTTTCCCCTATTGT
TTCAAACTGAAACCTTTTTTTTTCAAGATGACAAAAATCAAGGCAGTTCTTGACCAAGAGACGT
GGGTTGCTGTGGATGTTCCTGAAGAGTTTCAAGCAATCGTTCTTTCACTTTCATCCACTTACTC
TTCTGTTAATGGCATGGAGATGCCTAGCACTGATGATAACTCAAAGTTCAGTGATCATCAGCCT
ACAAGTCAAGAACTGACATATTCTGCTGAAAATAATGCTGATAATGGCAAAGTAACATCCGGGA
CTGGTGAAAACCAGGTTGAATCCACTTCTCAGAGTGCAAATAATGTTGCCGGGAATCTGAAATC
CACCTTGCAAACAATTGTACATGGAGGTGTTGGCTATCATATGGTAAACTGGTTAGTCATCTAT
ATTTACCTTCCAATAATTTGAAACTTGGTCTCTACTTATGAATTTTGCACTGCTGAAATGAAAT
GTGTTCAGTAGCCATCAATCTGTAAATTTAGTTTAAATAAAATAAATGTAGTATTTGATGCAGC
CATGTCTTTTATTGATTTGTTCTTGTTATTTTTAGAGTTCATTATTCTAAGTTATTACATTAAT
ATAAAGCATATTTATTCTTTTGGAATCCATGCCTCTCTCTTACAATGCTTTATTGGTTCTGCAG
CGGTTTGATACTGTTGAAGATGTTATCTGAATATGTTGACATCAGTAAATGTTTACCATCACTA
TCTTTGGAGGTGGTCCAACGTGTTGTGGAAATATTGAAGCTTTTCAACACTAGGACTTGCCAAC
TTGTTCTCGGTGCAGGGGCCATGCAGGTACATTAGCATGCCATTTCAGTTATTATCAATGCCTC
TTTATTTCATTGGCAACTGTATGCAAATGTTTAATGTGATTTTCACTTGATGTTAGTAATGTTT
GCTTGCATTTTTAAAGAACCTGAGCTGCATACATTGATTGAACCACATGCATCAGTGCATGAAG
CAACTGTTTGCAAAATAAGCTGTTCCTATATGGACACTATTTTAATCATTTTTTTCTCGAACGC
GCAGGAGAGCTGCACATCATTTACTTAAGAGGAGAAAAAGGTCCAAAATGGACCTAGATACAAA
GCCTACAAAAGGCAATAGAAAGCACACCCACTCACAGTCTGGCCTGCAACTATACTGCAGCACC
ACTACTAGATGGTTACAGCGAAAAAACTGCAGGCAGACCCCCAAACACTACAAACACTACGCCC
CGACTCTATTAAGGGCGACCTCTAGGTCTAAAATCTCAAGATGTTTAGCTCCAGCCTTACTCCA
ACATACCAACTCATCTAAGAAAATCCATCGAACTGTGGTTAAAGAAGAGTTCTCTCCATTAAAG
ACTGCCTTGTTACGGTGAGTCCAAAGGCACCCGGCCCCTAGAATGATGACGCCACTCAATCCCT
TTCTCTTGCTTTTGTGCACCTTCTTACATACCTTTCTCCACCATTCTGCAAAAGAGATCTCATC
CCCAGACGGAGAGAGATTGCCAAATCAAGAGTAAAAGGTCTCTAACTTCAGAACCCAAAAGATT
GGAAAAGAAACCATCCAACACCTCCTGCATTTGCTCATGATTGGTGACAATCCTCCCATCATCT
TCTAATTTAGAAATAAAATTCCTCTTCTTGCGGAGACAAGCCTGCATGTGAAAGAATTTTGTGT
TGGCGTCATCATCCTTCAAATAATGAACCCGCGGCCTCAAGCGTGCAACTGGTCCAAAGAAACA
AGGACAAGGCAGTGCTGCTTCAGCTTTCTCAGTAACCAACCTTCCTCTACAGACAATACCCTGC
TGTCTTGAGCTATCTCCAATTTATGTAGCACCTCACGAGCTAATCCCAATTGGAACCCAATATT
GCCTACCAGTTTGTGCCCCAAGACTGCAGCCTTCTGGATAATCTTTTAAGCTTCAAAGACACAT
CCTCAAGAGGGCAGGAGCCTTGAATCGGCTGGTTCCAAGAGGCAGCAACCTCTTCCAAGAACCC
AGGGAACTTGGGCCAGAAACTTTCGAAATGGAATCTGCGCTCCCCCCTGAGATCCACTCTGAGC
TTGAGGATCAGAGGACAGTGGCCAGAGATTTCAGTTGCACTGCTACAAAACATACAGTCAGGAA
AGAAATCTTCCCAGCTGCTAGTACAGAAAATATGGTCCAGCTTAACAAGAGTGGGATCCTCCCT
GTTAGCGTATCTGTGTATATGGGCCTGGCCCACTAGGGTTCTATATACTTGTACCCCTGTAGCT
GCTAGGGTTTCATTGTATTATACTCTATCACACTCCCTTTGATCAACCTCAAGAGCTTATTTCA
TTTAGAAGCCCAGTATTCTTTCTTGCAATAGTTCTAACTTGTTGGCATTTTTTTTTTCTGTTTT
GCTTCTCAGGTGTCTGGACTTAAATCAATTACATCTAAGCATTTAGCTCTGGCGAGTCAAATCA
TTAGTTTTATACATTCTTTAATTCCAG
						
					

			
		

Sequences
Splice junction sequence	TTCTGTTTTGCTTCTCAGGTGTCTGGACTTAAATCAATTACATCTAAGCATTTAGCTCTGGCGA GTCAAATCATTAGTTTTATACATTCTTTAATTCCAGggctgatgtcttgagagaaaacactgaa gcagttttcgcggcttgtgatgctgcccatggacgatgggctaagctactaggtgttcgtgctg gattacat
Assembled circRNA sequence	Yes The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).
Full-length trsnacripts	Transcript length: 836 Transcript exons: 101422294-101422465,101422561-101422644,101423601-101423 944,101424214-101424367,101425951-101426032 GGCTGATGTCTTGAGAGAAAACACTGAAGCAGTTTTCGCGGCTTGTGATGCTGCCCATGGACGA TGGGCTAAGCTACTAGGTGTTCGTGCTGGATTACATCCCAGGTTAAGGCTTGAAGAATTCTTGA TCATCTACAGCATAACAGAAGAATTTATAGCTGCTACAGAAAAGATTGGAGGCAGGTTGGGTTA CAACATTCGTGGAATCCTACAACAACAATCAAAGCAATTTGTTGATTATCAGCATAATGTTCGG ATGACAAAAATCAAGGCAGTTCTTGACCAAGAGACGTGGGTTGCTGTGGATGTTCCTGAAGAGT TTCAAGCAATCGTTCTTTCACTTTCATCCACTTACTCTTCTGTTAATGGCATGGAGATGCCTAG CACTGATGATAACTCAAAGTTCAGTGATCATCAGCCTACAAGTCAAGAACTGACATATTCTGCT GAAAATAATGCTGATAATGGCAAAGTAACATCCGGGACTGGTGAAAACCAGGTTGAATCCACTT CTCAGAGTGCAAATAATGTTGCCGGGAATCTGAAATCCACCTTGCAAACAATTGTACATGGAGG TGTTGGCTATCATATGGTAAACTGCGGTTTGATACTGTTGAAGATGTTATCTGAATATGTTGAC ATCAGTAAATGTTTACCATCACTATCTTTGGAGGTGGTCCAACGTGTTGTGGAAATATTGAAGC TTTTCAACACTAGGACTTGCCAACTTGTTCTCGGTGCAGGGGCCATGCAGGTGTCTGGACTTAA ATCAATTACATCTAAGCATTTAGCTCTGGCGAGTCAAATCATTAGTTTTATACATTCTTTAATT CCAG
Genomic sequence	GGCTGATGTCTTGAGAGAAAACACTGAAGCAGTTTTCGCGGCTTGTGATGCTGCCCATGGACGA TGGGCTAAGCTACTAGGTGTTCGTGCTGGATTACATCCCAGGTTAAGGCTTGAAGAATTCTTGA TCATCTACAGCATAACAGAAGAATTTATAGCTGCTACAGAAAAGGTTACATCTTCTTGTTTGGA ATAAATACACAAAATCAGCTGCATTAATTGCATATAAGCAAGTTGTAATGTTATCTTAGCCTCT TATTCTTGTAGATTGGAGGCAGGTTGGGTTACAACATTCGTGGAATCCTACAACAACAATCAAA GCAATTTGTTGATTATCAGCATAATGTTCGGGTCAGTAAAACAATGTTACAGTTCTATTGTCGA AGTTAAACCCTATTATTCAAATTTCACCTATTTGATTAGAAGCTTCCAAAATAATCATTGATCA TCATTATTGGAAGGAACAAAAAGCACCCAACTTTCCCTTCTTAATTAGGGATGACTGGTTGTCC ACCAAGCTGAATACAGCACATATGTTCAATTCAAGTATAACTTTGTACCCTTTTTTTACATTAA CAGTAGTTGATCTTTACTGAAACTCCCCCTATTACAAATTATGAGTCATTCTAATTTTATAGGT ATATAGTTTTGTTATTCTTCTAGATATATACTATGTCTAGATACTACTACCTCCGTCTTGAATA TTTGTCGCCCTCTAATTTATTTTTGAACTAAAACGCGACAAATAAAAAAGAACTGAGGGAGTAG TTTTTATTATGTATCTAGAAAAGCCAGAATGACTTATGACTTATAATTTGGAACAAATGGAGTG TTTCTGAGATCAAAATGGTGGTGGAATGAAAGATTTTAATTAATGAAGTTCATCTTCTCTAGAT ACTCAAATTATGTGAGTTTTGGATTATCCAAGGTTGCGAAAGGGCCTCCAGCCGAGTTGGTTAG GTGGTCTGAGTAACACTCCTTAGGTCCTGGGTTCGACTCCCCGTAGGAGCGAATTTCAGGTTGC GGTTAAAAAATCCCCTCGTCTGTCCCACGCCAAAGCACAGGTCTAAGTCTCAGCCCCGGTCGCG GTCGTTCTCACATGGGCTTCGATGCCGCAGTGTATGGGTGAGACAGGGGTTCGGGGGTCCTTCG ATCTGTGTGAGAAGGTCTTCTTCTTAATACAATACTCGGGGGCTGTCTTACCCCCCGCAGTTTT TTTGGATTATCCAAGGTGCTTGATAGTTAGGGCTAGTTAAACTAAATTGTGTTTCCCCTATTGT TTCAAACTGAAACCTTTTTTTTTCAAGATGACAAAAATCAAGGCAGTTCTTGACCAAGAGACGT GGGTTGCTGTGGATGTTCCTGAAGAGTTTCAAGCAATCGTTCTTTCACTTTCATCCACTTACTC TTCTGTTAATGGCATGGAGATGCCTAGCACTGATGATAACTCAAAGTTCAGTGATCATCAGCCT ACAAGTCAAGAACTGACATATTCTGCTGAAAATAATGCTGATAATGGCAAAGTAACATCCGGGA CTGGTGAAAACCAGGTTGAATCCACTTCTCAGAGTGCAAATAATGTTGCCGGGAATCTGAAATC CACCTTGCAAACAATTGTACATGGAGGTGTTGGCTATCATATGGTAAACTGGTTAGTCATCTAT ATTTACCTTCCAATAATTTGAAACTTGGTCTCTACTTATGAATTTTGCACTGCTGAAATGAAAT GTGTTCAGTAGCCATCAATCTGTAAATTTAGTTTAAATAAAATAAATGTAGTATTTGATGCAGC CATGTCTTTTATTGATTTGTTCTTGTTATTTTTAGAGTTCATTATTCTAAGTTATTACATTAAT ATAAAGCATATTTATTCTTTTGGAATCCATGCCTCTCTCTTACAATGCTTTATTGGTTCTGCAG CGGTTTGATACTGTTGAAGATGTTATCTGAATATGTTGACATCAGTAAATGTTTACCATCACTA TCTTTGGAGGTGGTCCAACGTGTTGTGGAAATATTGAAGCTTTTCAACACTAGGACTTGCCAAC TTGTTCTCGGTGCAGGGGCCATGCAGGTACATTAGCATGCCATTTCAGTTATTATCAATGCCTC TTTATTTCATTGGCAACTGTATGCAAATGTTTAATGTGATTTTCACTTGATGTTAGTAATGTTT GCTTGCATTTTTAAAGAACCTGAGCTGCATACATTGATTGAACCACATGCATCAGTGCATGAAG CAACTGTTTGCAAAATAAGCTGTTCCTATATGGACACTATTTTAATCATTTTTTTCTCGAACGC GCAGGAGAGCTGCACATCATTTACTTAAGAGGAGAAAAAGGTCCAAAATGGACCTAGATACAAA GCCTACAAAAGGCAATAGAAAGCACACCCACTCACAGTCTGGCCTGCAACTATACTGCAGCACC ACTACTAGATGGTTACAGCGAAAAAACTGCAGGCAGACCCCCAAACACTACAAACACTACGCCC CGACTCTATTAAGGGCGACCTCTAGGTCTAAAATCTCAAGATGTTTAGCTCCAGCCTTACTCCA ACATACCAACTCATCTAAGAAAATCCATCGAACTGTGGTTAAAGAAGAGTTCTCTCCATTAAAG ACTGCCTTGTTACGGTGAGTCCAAAGGCACCCGGCCCCTAGAATGATGACGCCACTCAATCCCT TTCTCTTGCTTTTGTGCACCTTCTTACATACCTTTCTCCACCATTCTGCAAAAGAGATCTCATC CCCAGACGGAGAGAGATTGCCAAATCAAGAGTAAAAGGTCTCTAACTTCAGAACCCAAAAGATT GGAAAAGAAACCATCCAACACCTCCTGCATTTGCTCATGATTGGTGACAATCCTCCCATCATCT TCTAATTTAGAAATAAAATTCCTCTTCTTGCGGAGACAAGCCTGCATGTGAAAGAATTTTGTGT TGGCGTCATCATCCTTCAAATAATGAACCCGCGGCCTCAAGCGTGCAACTGGTCCAAAGAAACA AGGACAAGGCAGTGCTGCTTCAGCTTTCTCAGTAACCAACCTTCCTCTACAGACAATACCCTGC TGTCTTGAGCTATCTCCAATTTATGTAGCACCTCACGAGCTAATCCCAATTGGAACCCAATATT GCCTACCAGTTTGTGCCCCAAGACTGCAGCCTTCTGGATAATCTTTTAAGCTTCAAAGACACAT CCTCAAGAGGGCAGGAGCCTTGAATCGGCTGGTTCCAAGAGGCAGCAACCTCTTCCAAGAACCC AGGGAACTTGGGCCAGAAACTTTCGAAATGGAATCTGCGCTCCCCCCTGAGATCCACTCTGAGC TTGAGGATCAGAGGACAGTGGCCAGAGATTTCAGTTGCACTGCTACAAAACATACAGTCAGGAA AGAAATCTTCCCAGCTGCTAGTACAGAAAATATGGTCCAGCTTAACAAGAGTGGGATCCTCCCT GTTAGCGTATCTGTGTATATGGGCCTGGCCCACTAGGGTTCTATATACTTGTACCCCTGTAGCT GCTAGGGTTTCATTGTATTATACTCTATCACACTCCCTTTGATCAACCTCAAGAGCTTATTTCA TTTAGAAGCCCAGTATTCTTTCTTGCAATAGTTCTAACTTGTTGGCATTTTTTTTTTCTGTTTT GCTTCTCAGGTGTCTGGACTTAAATCAATTACATCTAAGCATTTAGCTCTGGCGAGTCAAATCA TTAGTTTTATACATTCTTTAATTCCAG

			
						 Conservation Information
					
						Conserved circRNAs
						
							NA						
					
						PMCS
						0.145090507

Conservation Information
Conserved circRNAs	NA
PMCS	0.145090507

			
						 Functional Information
					
						Coding potential
						Y
					
						Potential coding position
						
							101423602-101422304(+)
101422353-101426000(-)
101422427-101426014(-)
						
						Potential amino acid sequence
						
							MTKIKAVLDQETWVAVDVPEEFQAIVLSLSSTYSSVNGMEMPSTDDNSKFSDHQPTSQELTYSA
ENNADNGKVTSGTGENQVESTSQSANNVAGNLKSTLQTIVHGGVGYHMVNCGLILLKMLSEYVD
ISKCLPSLSLEVVQRVVEILKLFNTRTCQLVLGAGAMQVSGLKSITSKHLALASQIISFIHSLI
PGLMS*(+)
MGSITSRENCFSVFSQDISPGIKECIKLMI*(-)
MIKNSSSLNLGCNPARTPSSLAHRPWAASQAAKTASVFSLKTSALELKNV*(-)
						
						Sponge-miRNAs
						
							NA						
					
						circRNA-miRNA-mRNA network
						 VISUALIZATION
					
						Potential function description
						NA

Functional Information
Coding potential	Y
Potential coding position	101423602-101422304(+) 101422353-101426000(-) 101422427-101426014(-)
Potential amino acid sequence	MTKIKAVLDQETWVAVDVPEEFQAIVLSLSSTYSSVNGMEMPSTDDNSKFSDHQPTSQELTYSA ENNADNGKVTSGTGENQVESTSQSANNVAGNLKSTLQTIVHGGVGYHMVNCGLILLKMLSEYVD ISKCLPSLSLEVVQRVVEILKLFNTRTCQLVLGAGAMQVSGLKSITSKHLALASQIISFIHSLI PGLMS(+) MGSITSRENCFSVFSQDISPGIKECIKLMI(-) MIKNSSSLNLGCNPARTPSSLAHRPWAASQAAKTASVFSLKTSALELKNV*(-)
Sponge-miRNAs	NA
circRNA-miRNA-mRNA network	VISUALIZATION
Potential function description	NA

			
						 Other Information
					
						References
						Ma et al., 2021b

circRNA

Detail information of Zm00001d025044_circ_g.5

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