Detail information of BGIOSGA014534_circ_g.7


General Information
CircRNA Name BGIOSGA014534_circ_g.7
ID in PlantcircBase osi_circ_005667
Alias 4:27267464|27267703
Organism Oryza sativa ssp. indica
Position chr4: 27267464-27267703  JBrowse»
Reference genome Oryza_indica.ASM465v1.42
Type   e-circRNA
Identification method find_circ
Parent gene BGIOSGA014534
Parent gene annotation NA
Parent gene strand -
Alternative splicing BGIOSGA014534_circ_g.5 BGIOSGA014534_circ_igg.1 BGIOSGA014534_circ_g.2 BGIOSGA014534_circ_g.3 BGIOSGA014534_circ_igg.4 BGIOSGA014534_circ_g.5 BGIOSGA014534_circ_g.6
Support reads NA
Tissues leaf
Exon boundary   No-No
Splicing signals   GT-AG
Number of exons covered BGIOSGA014534-TA:1
Experimental Information
Sanger sequencing for BSS   NA
PCR primers for BSS    NA
Sanger sequencing for FL    NA
PCR primers for FL    NA
Sequences
Splice junction sequence   CCACCACCTGGATGATGTGAACCTGGCCCTCCACGACCCTGATACTCAGGAGGCCCTCCGCCTG
GATGGTGTGAACCTTGCCCTCCACGGCCCTGATAATgtccgccatagtatggctgtggcattcc
acctctggggcgtggaccaccacgtccttgatagtcacgcggttgatactcgggaggcccacca
cctgggtg
Assembled circRNA sequence   NA
Full-length trsnacripts NA
Genomic sequence GTCCGCCATAGTATGGCTGTGGCATTCCACCTCTGGGGCGTGGACCACCACGTCCTTGATAGTC
ACGCGGTTGATACTCGGGAGGCCCACCACCTGGGTGATGTGAACCTGATCCTCCACGGCCCTGA
TAGTCAGGAGGCCCACCACCTGGATGATGTGAACCTGGCCCTCCACGACCCTGATACTCAGGAG
GCCCTCCGCCTGGATGGTGTGAACCTTGCCCTCCACGGCCCTGATAAT
Conservation Information
Conserved circRNAs NA
PMCS
Functional Information
Coding potential N
Potential coding position NA
Potential amino acid sequence NA
Sponge-miRNAs NA
circRNA-miRNA-mRNA network  VISUALIZATION
Potential function description NA
Other Information
References Huang et al., 2021