Detailed infomation of each circRNA
General Information | |
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CircRNA Name | Os04g0583101_circ_g.5 |
ID in PlantcircBase | osa_circ_024990 |
Alias | Os04circ12072 |
Organism | Oryza sativa |
Position | chr4: 29457475-29457655 JBrowse» |
Reference genome | IRGSP-1.0.38 |
Type | e-circRNA |
Identification method | SMALT, Segemehl |
Parent gene | Os04g0583101 |
Parent gene annotation |
Pentatricopeptide repeat domain containing protein. (Os04t058310 1-01) |
Parent gene strand | + |
Alternative splicing | Os04g0583101_circ_g.2 Os04g0583101_circ_g.3 Os04g0583101_circ_g.4 Os04g0583101_circ_g.6 |
Support reads | 2 |
Tissues | panicle |
Exon boundary | No-No |
Splicing signals | GT-AG |
Number of exons covered | Os04t0583000-01:1 Os04t0583000-01:1 Os04t0583101-01:1 |
Conservation Information | |
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Conserved circRNAs | osi_circ_005682 osi_circ_005683* |
PMCS | 0.393406354 |
Functional Information | |
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Coding potential | N |
Potential coding position |
NA |
Potential amino acid sequence |
NA |
Sponge-miRNAs | NA |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | NA |
Other Information | |
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References | Lu et al., 2015 |