Detailed infomation of each circRNA
General Information | |
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CircRNA Name | Zm00001d009424_circ_g.8 |
ID in PlantcircBase | zma_circ_009616 |
Alias | zma_circ_0002988 |
Organism | Zea mays |
Position | chr8: 63811385-63813194 JBrowse» |
Reference genome | AGPv4.38 |
Type | e-circRNA |
Identification method | find_circ |
Parent gene | Zm00001d009424 |
Parent gene annotation |
Cyclin/Brf1-like TBP-binding protein |
Parent gene strand | + |
Alternative splicing | Zm00001d009424_circ_g.1 Zm00001d009424_circ_g.2 Zm00001d009424_circ_g.3 Zm00001d009424_circ_g.4 Zm00001d009424_circ_g.5 Zm00001d009424_circ_g.6 Zm00001d009424_circ_g.7 Zm00001d009424_circ_g.9 Zm00001d009424_circ_g.10 |
Support reads | NA |
Tissues | leaf, root |
Exon boundary | No-No |
Splicing signals | CT-AC |
Number of exons covered | Zm00001d009424_T008:2 Zm00001d009424_T004:2 Zm00001d009424_T016:2 Zm00001d009424_T003:2 Zm00001d009424_T012:2 Zm00001d009424_T002:2 Zm00001d009424_T006:2 Zm00001d009424_T001:2 Zm00001d009424_T009:2 Zm00001d009424_T014:2 Zm00001d009424_T011:2 Zm00001d009424_T013:2 Zm00001d009424_T017:2 Zm00001d009424_T005:2 Zm00001d009424_T007:2 Zm00001d009424_T010:2 Zm00001d009424_T015:2 |
Conservation Information | |
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Conserved circRNAs | NA |
PMCS | 0.116156786 |
Functional Information | |
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Coding potential | N |
Potential coding position |
NA |
Potential amino acid sequence |
NA |
Sponge-miRNAs | NA |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | NA |
Other Information | |
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References | Ma et al., 2021b |