Detailed infomation of each circRNA
General Information | |
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CircRNA Name | Os12g0443700_circ_g.1 |
ID in PlantcircBase | osa_circ_011411 |
Alias | NA |
Organism | Oryza sativa |
Position | chr12: 14898183-14904304 JBrowse» |
Reference genome | IRGSP-1.0.38 |
Type | ei-circRNA |
Identification method | CIRCexplorer, PcircRNA_finder |
Parent gene | Os12g0443700 |
Parent gene annotation |
Similar to Glu-prolyl-tRNA aminoacyl synthetase (Fragment). (Os1 2t0443700-01);Similar to Glu-prolyl-tRNA aminoacyl synthetase (F ragment). (Os12t0443700-02);Similar to Aminoacyl-tRNA synthase. (Os12t0443700-03) |
Parent gene strand | - |
Alternative splicing | Os12g0443700_circ_g.2 Os12g0443700_circ_g.3 Os12g0443700_circ_g.4 Os12g0443700_circ_g.5 Os12g0443700_circ_g.6 Os12g0443700_circ_g.7 |
Support reads | 1 |
Tissues | seed |
Exon boundary | Yes-No |
Splicing signals | CT-AC |
Number of exons covered | Os12t0443700-02:10 Os12t0443700-01:10 Os12t0443700-03:3 |
Conservation Information | |
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Conserved circRNAs | NA |
PMCS | 0.104180865 |
Functional Information | |
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Coding potential | N |
Potential coding position |
NA |
Potential amino acid sequence |
NA |
Sponge-miRNAs | NA |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | NA |
Other Information | |
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References | Chu et al., 2017 |