Statistics

Statistics data of PlantcircBase v7.0


  1. Identification methods
  2. Number of tools
  3. circRNA types
  4. circRNA length distribution
  5. splicing signals
Arabidopsis thaliana

Arabidopsis thaliana

Identified circRNAs (circRNA transcripts): 52393
circRNA loci: 16875
Created with Highcharts 6.1.0Different types of circRNA identification toolsNumber of identified circRNAsNumber of circRNAs identified by different bioinformatic tools in Arabidopsis thaliana11 27411 27419 09519 0958 5308 53022 52522 5252 7062 70616716711 82811 828001651651651651471472 9272 92712 66312 6636486481313CIRCexplorecircRNA_finderCIRIfind_circKNIFEMapSplicePcircRNA_finderTophatSegemehlSMALTin-house scriptCIRI-fullCIRI2circseq_cupNA05k10k15k20k25k
Created with Highcharts 6.1.0Number of softwaresNumber of identified circRNAsNumber of circRNAs identified by multiple softwares in Arabidopsis thaliana28 63528 63519 89319 8932 3822 3828608606236231234>=505k10k15k20k25k30k35k
Created with Highcharts 6.1.0circRNA typesNumber of identified circRNAsDifferent types of circRNAs in Arabidopsis thaliana31 69631 6961 6711 6711 3351 3355 1695 1692902901451451 8941 8942 7022 7025 7075 7071 7841 784e-circRNAei-circRNAu-circRNAue-circRNAui-circRNAie-circRNAi-circRNAag-circRNAig-circRNAigg-circRNA010k20k30k40k
Created with Highcharts 6.1.0circRNA length (bp)Number of identified circRNAsDistribution of circRNA length in Arabidopsis thaliana3 8253 82525 15725 15710 95710 9573 8053 8051 6341 6347 0157 015<=100101-500501-10001001-15001501-2000>200005k10k15k20k25k30k
Created with Highcharts 6.1.0splicing signal typesNumber of identified circRNAsDistribution of circRNA splicing signals in Arabidopsis thaliana22 89922 89923 07923 0796 4156 415GT-AGCT-ACother05k10k15k20k25k
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Last modified at 2022-05-16