Detailed infomation of each circRNA
General Information | |
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CircRNA Name | Os06g0195600_circ_g.9 |
ID in PlantcircBase | osa_circ_030069 |
Alias | Os_ciR10732 |
Organism | Oryza sativa |
Position | chr6: 4851524-4851762 JBrowse» |
Reference genome | IRGSP-1.0.38 |
Type | i-circRNA |
Identification method | CIRCexplorer, find_circ |
Parent gene | Os06g0195600 |
Parent gene annotation |
Similar to SAC domain protein 3. (Os06t0195600-01) |
Parent gene strand | - |
Alternative splicing | Os06g0195600_circ_g.1 Os06g0195600_circ_g.2 Os06g0195600_circ_g.3 Os06g0195600_circ_g.4 Os06g0195600_circ_g.5 Os06g0195600_circ_g.6 Os06g0195600_circ_g.7 Os06g0195600_circ_g.8 |
Support reads | 2/1 |
Tissues | root/root |
Exon boundary | No-No |
Splicing signals | CT-AC |
Number of exons covered | 0 |
Conservation Information | |
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Conserved circRNAs | NA |
PMCS | 0.371590156 |
Functional Information | |
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Coding potential | N |
Potential coding position |
NA |
Potential amino acid sequence |
NA |
Sponge-miRNAs | NA |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | NA |
Other Information | |
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References | Ye et al., 2015;Chu et al., 2017 |