Detailed infomation of each circRNA
General Information | |
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CircRNA Name | AT3G14660_circ_g.1 |
ID in PlantcircBase | ath_circ_021796 |
Alias | At_ciR414, AT3G14660_C1 |
Organism | Arabidpsis thaliana |
Position | chr3: 4926037-4926406 JBrowse» |
Reference genome | TAIR10.38 |
Type | e-circRNA |
Identification method | CIRCexplorer, PcircRNA_finder, find_circ, CIRI-full, CIRI2 |
Parent gene | AT3G14660 |
Parent gene annotation |
Cytochrome P450 72A13 |
Parent gene strand | + |
Alternative splicing | 3_circ_ag.6 3_circ_ag.7 3_circ_ag.8 3_circ_ag.9 AT3G14650_circ_g.1 3_circ_ag.2 3_circ_ag.3 3_circ_ag.4 3_circ_ag.5 AT3G14650_circ_g.6 3_circ_ag.7 3_circ_ag.8 3_circ_ag.9 3_circ_ag.10 AT3G14650_circ_g.11 3_circ_ag.12 3_circ_ag.13 3_circ_ag.14 AT3G14690_circ_g.1 AT3G14690_circ_g.2 AT3G14690_circ_g.3 AT3G14690_circ_g.4 |
Support reads | 38/41/2 |
Tissues | leaf/whole_plant/seedlings |
Exon boundary | Yes-Yes |
Splicing signals | GT-AG |
Number of exons covered | AT3G14660.3:1 AT3G14660.1:1 AT3G14660.2:1 |
Conservation Information | |
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Conserved circRNAs | NA |
PMCS | 0.690625992 |
Functional Information | |
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Coding potential | N |
Potential coding position |
NA |
Potential amino acid sequence |
NA |
Sponge-miRNAs | NA |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | response to drought stress |
Other Information | |
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References | Ye et al., 2015;Chu et al., 2017;Pan et al., 2017;Zhang et al., 2019 |