Detail information of AT3G14650_circ_g.6


General Information
CircRNA Name AT3G14650_circ_g.6
ID in PlantcircBase ath_circ_021787
Alias NA
Organism Arabidpsis thaliana
Position chr3: 4923154-4923252  JBrowse»
Reference genome TAIR10.38
Type   i-circRNA
Identification method CIRCexplorer
Parent gene AT3G14650
Parent gene annotation Cytochrome P450 72A11
Parent gene strand +
Alternative splicing 3_circ_ag.6 3_circ_ag.7 3_circ_ag.8 3_circ_ag.9 AT3G14650_circ_g.1 3_circ_ag.2 3_circ_ag.3 3_circ_ag.4 3_circ_ag.5 3_circ_ag.7 3_circ_ag.8 3_circ_ag.9 3_circ_ag.10 AT3G14650_circ_g.11 3_circ_ag.12 3_circ_ag.13 3_circ_ag.14 AT3G14660_circ_g.1 AT3G14690_circ_g.1 AT3G14690_circ_g.2 AT3G14690_circ_g.3 AT3G14690_circ_g.4
Support reads 1
Tissues seed
Exon boundary   No-No
Splicing signals   GT-AG
Number of exons covered 0
Experimental Information
Sanger sequencing for BSS   NA
PCR primers for BSS    NA
Sanger sequencing for FL    NA
PCR primers for FL    NA
Sequences
Splice junction sequence   ACTCTTGATCTTAAAATGTCGCAATCTATTCCTTAAAGATATGAACCGTgtaatgaaaaactca
acttatctgatttaatataggtccttctgagcttg
Assembled circRNA sequence   NA
Full-length trsnacripts NA
Genomic sequence GTAATGAAAAACTCAACTTATCTGATTTAATATAGGTCCTTCTGAGCTTGACTCTTGATCTTAA
AATGTCGCAATCTATTCCTTAAAGATATGAACCGT
Conservation Information
Conserved circRNAs NA
PMCS 0.1010101
Functional Information
Coding potential N
Potential coding position NA
Potential amino acid sequence NA
Sponge-miRNAs NA
circRNA-miRNA-mRNA network  VISUALIZATION
Potential function description NA
Other Information
References Chu et al., 2017