Detailed infomation of each circRNA
General Information | |
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CircRNA Name | Zm00001d038849_circ_g.6 |
ID in PlantcircBase | zma_circ_002407 |
Alias | circ1121 |
Organism | Zea mays |
Position | chr6: 165827007-165827451 JBrowse» |
Reference genome | AGPv4.38 |
Type | u-circRNA |
Identification method | CIRI |
Parent gene | Zm00001d038849 |
Parent gene annotation |
alpha/beta-Hydrolases superfamily protein |
Parent gene strand | + |
Alternative splicing | Zm00001d038849_circ_g.1 Zm00001d038849_circ_g.2 Zm00001d038849_circ_g.3 Zm00001d038849_circ_g.4 Zm00001d038849_circ_g.5 Zm00001d038849_circ_g.7 |
Support reads | 12 |
Tissues | seedling leaves |
Exon boundary | No-Yes |
Splicing signals | GT-TA |
Number of exons covered | Zm00001d038849_T002:2 Zm00001d038849_T005:2 Zm00001d038849_T001:2 Zm00001d038849_T003:2 Zm00001d038849_T004:2 |
Conservation Information | |
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Conserved circRNAs | NA |
PMCS | 0.327531554 |
Functional Information | |
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Coding potential | N |
Potential coding position |
NA |
Potential amino acid sequence |
NA |
Sponge-miRNAs | NA |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | NA |
Other Information | |
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References | Chen et al., 2017b |