Plant Circular RNA Database

Detail information of Os09g0543100_circ_g.6

			
						 General Information
					
						CircRNA Name
						Os09g0543100_circ_g.6
					
						ID in PlantcircBase
						osa_circ_040084
					
						Alias
						NA
					
						Organism
						
							Oryza sativa						
					
						Position
						
							chr9: 21393535-21397125  JBrowse»						
					
						Reference genome
						
							IRGSP-1.0.38						
					
						Type  
						
							e-circRNA							
									
						Identification method
						CIRCexplorer
					
						Parent gene
						
							Os09g0543100						
					
						Parent gene annotation
						
							Similar to predicted protein. (Os09t0543100-01);Similar to Phosp
holipase D nu-2 (Fragment). (Os09t0543100-02);Similar to predict
ed protein. (Os09t0543100-03)
							
						Parent gene strand
						+
					
						Alternative splicing
						
							Os09g0543100_circ_g.2 Os09g0543100_circ_g.3 Os09g0543100_circ_g.4 Os09g0543100_circ_g.5 Os09g0543100_circ_g.7 Os09g0543100_circ_g.8 Os09g0543100_circ_g.9 Os09g0543100_circ_g.10 						
					
						Support reads
						1
					
						Tissues
						shoot
					
						Exon boundary  
						
							Yes-Yes							"Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.

						Splicing signals  
						
							GT-AG							The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.

						Number of exons covered
						Os09t0543100-02:8
Os09t0543100-01:1

General Information
CircRNA Name	Os09g0543100_circ_g.6
ID in PlantcircBase	osa_circ_040084
Alias	NA
Organism	Oryza sativa
Position	chr9: 21393535-21397125 JBrowse»
Reference genome	IRGSP-1.0.38
Type	e-circRNA
Identification method	CIRCexplorer
Parent gene	Os09g0543100
Parent gene annotation	Similar to predicted protein. (Os09t0543100-01);Similar to Phosp holipase D nu-2 (Fragment). (Os09t0543100-02);Similar to predict ed protein. (Os09t0543100-03)
Parent gene strand	+
Alternative splicing	Os09g0543100_circ_g.2 Os09g0543100_circ_g.3 Os09g0543100_circ_g.4 Os09g0543100_circ_g.5 Os09g0543100_circ_g.7 Os09g0543100_circ_g.8 Os09g0543100_circ_g.9 Os09g0543100_circ_g.10
Support reads	1
Tissues	shoot
Exon boundary	Yes-Yes "Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.
Splicing signals	GT-AG The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.
Number of exons covered	Os09t0543100-02:8 Os09t0543100-01:1

			
						 Experimental Information
					
						Sanger sequencing for BSS  
						
							NA							Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".

						PCR primers for BSS   
						
							NA							PCR primers used in back-splicing site (BSS) validation.

						Sanger sequencing for FL   
						
							NA							Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.

						PCR primers for FL   
						
							NA							 PCR primers used in full-length (FL) sequence validation.

Experimental Information
Sanger sequencing for BSS	NA Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".
PCR primers for BSS	NA PCR primers used in back-splicing site (BSS) validation.
Sanger sequencing for FL	NA Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.
PCR primers for FL	NA PCR primers used in full-length (FL) sequence validation.

			
				
						 Sequences
					

				
						Splice junction sequence  
						
							CCAAAGATCTTTGGCTGGTTCCAGAGATACTGAAATTGCCATGGGCGCATACCAGCCTCACCAC
ACATGGTCTACAAAGGGGGGTCATCCTCGCGGTCAGggtggagtgatggcgacacatgatgaag
aaactagaaaattcttcaagcattcctcagtcatttgtgttctttcacctcggtatgccagcag
taagctga

									
								

					

						Assembled circRNA sequence  
						
							NA
The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).

					

						Full-length trsnacripts
						
							NA						
					

						Genomic sequence
						
							GGTGGAGTGATGGCGACACATGATGAAGAAACTAGAAAATTCTTCAAGCATTCCTCAGTCATTT
GTGTTCTTTCACCTCGGTATGCCAGCAGTAAGCTGAGCATTTTCAAACAACAGGCAAGTGCCAG
GCTGGATAGTATATAGCTGATAACTGTTAGCACTTTTATACGTTCCAGATAATGGTTATCACCA
TAAACCTTAAGGAAGTTTATTGTTTGCTCATGTGTGCTGCCCCTTCTCGAGCTTATGTGTGCTG
CCCCTTCTTGAGGAGCTCCATGTTCTATAGAAACTCATTATGGGTTGGTGTCATTTGGATATAA
CATGATGCAACCAAGTTGATGGACAGCCTTGTTTAAACAAAATCAGGATATGTCTATCATCTAT
TGTTTTGAATAAGCCCACTATTTATTATATTGTGAACGTTTACACTGAAATTTAGTATGTATTT
TATTCTCTATTTTTTATTATCCTAAGTTTGTAGAAAAGTTTGCAGGTTGTTGGGACTTCTGTAA
CTTAATTTATTGAATTTTATTCCCTCATTTTGATGATCTTGAATTTTGTAGCTTGCAGGTTGTT
GGGACTTTGTTTACCCATCATCAAAAATGCGTGCTGGTTGATACACAAGCTTGGGGAAACAAGC
GGAAGATTACTGCTTTTATCGGTGGCCTGGATCTTTGTGATGGGCGTTATGATACACCCGAACA
TAGGCTTTTTAAGGATCTTGACACAGTATTCGATAATGATTATCATAACCCTACATTTCCGGTG
AGTACTTATGTTTTGCTAGTAATAAGTTCTACATAACTTCTCCATGCCATACCAACATGGAGTC
AGGACATAGGCTCCTGGGTTCGTGGTGCAATATTTCCTGACTGTCATCATTTCAATACTTTATA
CTCTCTTGATGCAGTCAGGTGCAAAGGGGGGGCCTAGACAACCATGGCATGACCTTCACTGTAG
GATTGATGGTCCAGCTGCGTATGATGTCTTGAAAAATTTTGAGCAACGCTGGAGAAAGGCAACG
AAATGGCGTGAACGATTTAGAAAAGTGTCTCATTGGAAAGATGATGCCCTGATAAAGTTGGAAC
GTATCTCATGGATACTTAGCCCTTCGCCTACTATTCCAAATGATGATATTAGTTTGCGGGTTTC
AAAAGAAGAAGATCCTGAAAATTGGCATGTTCAGGTATTACCACTCCTCTTTTAATTTCTGCTT
GTGCTAAAATACTTCTGAAAATTTTGGCAGCGATACAAATATGTTATTTTTCTCAGGTATTCCG
GTCAATAGACTCTGGTTCGCTTAAAGGGTTTCCTAGTGATTGCAAAGAAGCTTCAAAGCAGGTT
AGTCCGATACATCTCCTAATCTGAAATGTTAAACAAATCTACAGTTTTGATGACGTTAGTGGTC
CTATATTTTTTTATTCTTACTTTCTCATCTTACACCATTCCAAAATGTGATCTGGTAAATGTTT
TAACTGTTTCATGTACTTCTGCAGAATCTTATTTGCCGGAAGGACCTGATAATTGATAAGAGCA
TCCACACTGCTTATGTCCGGGCAATCAGATCCGCCCAGCATTTCATTTATATTGAAAATCAATA
TTTCCTTGGGTCATCATATGCTTGGCCGTCCTATGTTAATTCAGGTGTGCTGCTTTCGCCTTTT
AGATCCTGCCTGTAATCCTTGCTAGTTGTAATTTAACACTCCAAGTTGCCCACACGATCTTCCG
CTGATAAATAAGGCCAACTATTCCTCCATATCCTTCTAAAAACAAAGGTCATAACAGATGAATG
GAAAACATTTTTTTATGTTACACTTTTAGGTTGGCCGAGTTTTTATTTTCCCATCCTGTTGTTG
TTGATGGTGCTGCTGTGTGATCTACAGCATTAGTGTTTAATGATTTACATAAAAATGGAACTGA
CCTCTTAGTGTTTTGCAGGTGCTGACAATCTGGTACCTATTGAATTGGCCCTCAAAATTGCAAG
CAAGATTAGGGCTGGTGAACGGTTTGCAGTTTATGTAGTCATACCGATGTGGCCTGAAGGAGTC
CCTACAGCAGCTTCTGTACAAGAAATTCTTTTCTTTCAGGTAAGTTTATTTATTATTTTTAACA
GTATGTAATTTCACAGAACTACTTTCAGATAAGCCATAGCTACTTTCACTGGCTATTTCACTTT
GCACCAACATGGCTACGGTTGGATTCTCCTCACGTGTGCTAAGTCGCTAATCCTAGGGTAGGGG
ACACACTTGTGCATTCATGTTGAGGAATAAGGACCACTTGTCAAGGGCTTGCAATTTGGCTGTG
TGGAATTGAGTCCAATAGCTGTCAAGAAGCCCATAATCCAGCAGCTAATGAAAACCGTTAATTC
TGTTCTCTTTTTATGATTTCTGCCTTGCAACTTCAGTCTCAGGTTTCCAAACACTAGGAATATT
CTTGCTATCTGCACTCCCCTTGGCATATTTTCTAATGTTATTGTTTTCTAGCCTTTTTATACGG
CTATATACTTATTCACTTCTTTTGAGGCAAGCCCTTCCACCTTTTGAGGAGCTGTGCCTTCACA
ACTCAGTTTTGAGTCCTTGGTTCAAATTTGAGTTCAGTTATTCTTTTCTCATATATAAAAATCC
AAATAGTTAATTCCGCCAAGGTGTTATAGAGAAGTCCTTTTGCCTTTTTTGGAAACAAAATTCT
GGTGGGGGTCGAAATTGGATTTTTGCAGCAGAGCATTCATACCCATGATTTTTTTGCTCTCTCC
CAGGCACAGACAATGGAGATGATGTATCGTATAATTGCACAAGAGCTCAAGGCCATGAATATTA
AGAATGCACACCCTCAAGATTACTTGAACTTCTATTGTCTGGGCAATCGAGAAGAATCATCATC
ATCAAATGGCAGCCCTGAATCTAACGATAAAAGTGCAGCGGTAATTTTTTCAATCTTCATCATC
TTTTTTAAGATAACATTATCTCAATTACATTGCTAATATCAGTACCTTCTCGCTGGTTGGTATC
TTTTCATCGTCCGAACTCATAGCGTGGGTAGTAAGATTTATTCTTACTCTTTACATGTAAAAAG
AACCTTGGTTTCGTTTAACTTGCTTGAAAAATGCTCATCCATTGGTTAGGAAGGTTGCTTTTAT
ACTGTCATATTGGCTGGCTCTTTTGATGATCTGAACTTGTGCTGTAATTTTTTTTGTCCCAGTC
ATATATATTTACACATTCCAAGATATTTCTTTCCGTTAGTTGACAATATGATACTGAGTTTTTG
TCACTTCACTCTACTTTTGCTCTCTCATAATCTACTTGTCACGAGGATAGATCCATTTTTTTTT
CCTTTTGAGAAGTCACTATGTATACACATACTTATTTTCCATTTCCCTGTTCTTTACATTCACA
GGCCTTGGCTAGAAAATACCGGCGTTTTATGATCTATGTTCATGCAAAGGGGATGATTGTAGAT
GATGAATATGTTATTCTGGGGTCAGCAAACATCAACCAAAGATCTTTGGCTGGTTCCAGAGATA
CTGAAATTGCCATGGGCGCATACCAGCCTCACCACACATGGTCTACAAAGGGGGGTCATCCTCG
CGGTCAG
						
					

			
		

Sequences
Splice junction sequence	CCAAAGATCTTTGGCTGGTTCCAGAGATACTGAAATTGCCATGGGCGCATACCAGCCTCACCAC ACATGGTCTACAAAGGGGGGTCATCCTCGCGGTCAGggtggagtgatggcgacacatgatgaag aaactagaaaattcttcaagcattcctcagtcatttgtgttctttcacctcggtatgccagcag taagctga
Assembled circRNA sequence	NA The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).
Full-length trsnacripts	NA
Genomic sequence	GGTGGAGTGATGGCGACACATGATGAAGAAACTAGAAAATTCTTCAAGCATTCCTCAGTCATTT GTGTTCTTTCACCTCGGTATGCCAGCAGTAAGCTGAGCATTTTCAAACAACAGGCAAGTGCCAG GCTGGATAGTATATAGCTGATAACTGTTAGCACTTTTATACGTTCCAGATAATGGTTATCACCA TAAACCTTAAGGAAGTTTATTGTTTGCTCATGTGTGCTGCCCCTTCTCGAGCTTATGTGTGCTG CCCCTTCTTGAGGAGCTCCATGTTCTATAGAAACTCATTATGGGTTGGTGTCATTTGGATATAA CATGATGCAACCAAGTTGATGGACAGCCTTGTTTAAACAAAATCAGGATATGTCTATCATCTAT TGTTTTGAATAAGCCCACTATTTATTATATTGTGAACGTTTACACTGAAATTTAGTATGTATTT TATTCTCTATTTTTTATTATCCTAAGTTTGTAGAAAAGTTTGCAGGTTGTTGGGACTTCTGTAA CTTAATTTATTGAATTTTATTCCCTCATTTTGATGATCTTGAATTTTGTAGCTTGCAGGTTGTT GGGACTTTGTTTACCCATCATCAAAAATGCGTGCTGGTTGATACACAAGCTTGGGGAAACAAGC GGAAGATTACTGCTTTTATCGGTGGCCTGGATCTTTGTGATGGGCGTTATGATACACCCGAACA TAGGCTTTTTAAGGATCTTGACACAGTATTCGATAATGATTATCATAACCCTACATTTCCGGTG AGTACTTATGTTTTGCTAGTAATAAGTTCTACATAACTTCTCCATGCCATACCAACATGGAGTC AGGACATAGGCTCCTGGGTTCGTGGTGCAATATTTCCTGACTGTCATCATTTCAATACTTTATA CTCTCTTGATGCAGTCAGGTGCAAAGGGGGGGCCTAGACAACCATGGCATGACCTTCACTGTAG GATTGATGGTCCAGCTGCGTATGATGTCTTGAAAAATTTTGAGCAACGCTGGAGAAAGGCAACG AAATGGCGTGAACGATTTAGAAAAGTGTCTCATTGGAAAGATGATGCCCTGATAAAGTTGGAAC GTATCTCATGGATACTTAGCCCTTCGCCTACTATTCCAAATGATGATATTAGTTTGCGGGTTTC AAAAGAAGAAGATCCTGAAAATTGGCATGTTCAGGTATTACCACTCCTCTTTTAATTTCTGCTT GTGCTAAAATACTTCTGAAAATTTTGGCAGCGATACAAATATGTTATTTTTCTCAGGTATTCCG GTCAATAGACTCTGGTTCGCTTAAAGGGTTTCCTAGTGATTGCAAAGAAGCTTCAAAGCAGGTT AGTCCGATACATCTCCTAATCTGAAATGTTAAACAAATCTACAGTTTTGATGACGTTAGTGGTC CTATATTTTTTTATTCTTACTTTCTCATCTTACACCATTCCAAAATGTGATCTGGTAAATGTTT TAACTGTTTCATGTACTTCTGCAGAATCTTATTTGCCGGAAGGACCTGATAATTGATAAGAGCA TCCACACTGCTTATGTCCGGGCAATCAGATCCGCCCAGCATTTCATTTATATTGAAAATCAATA TTTCCTTGGGTCATCATATGCTTGGCCGTCCTATGTTAATTCAGGTGTGCTGCTTTCGCCTTTT AGATCCTGCCTGTAATCCTTGCTAGTTGTAATTTAACACTCCAAGTTGCCCACACGATCTTCCG CTGATAAATAAGGCCAACTATTCCTCCATATCCTTCTAAAAACAAAGGTCATAACAGATGAATG GAAAACATTTTTTTATGTTACACTTTTAGGTTGGCCGAGTTTTTATTTTCCCATCCTGTTGTTG TTGATGGTGCTGCTGTGTGATCTACAGCATTAGTGTTTAATGATTTACATAAAAATGGAACTGA CCTCTTAGTGTTTTGCAGGTGCTGACAATCTGGTACCTATTGAATTGGCCCTCAAAATTGCAAG CAAGATTAGGGCTGGTGAACGGTTTGCAGTTTATGTAGTCATACCGATGTGGCCTGAAGGAGTC CCTACAGCAGCTTCTGTACAAGAAATTCTTTTCTTTCAGGTAAGTTTATTTATTATTTTTAACA GTATGTAATTTCACAGAACTACTTTCAGATAAGCCATAGCTACTTTCACTGGCTATTTCACTTT GCACCAACATGGCTACGGTTGGATTCTCCTCACGTGTGCTAAGTCGCTAATCCTAGGGTAGGGG ACACACTTGTGCATTCATGTTGAGGAATAAGGACCACTTGTCAAGGGCTTGCAATTTGGCTGTG TGGAATTGAGTCCAATAGCTGTCAAGAAGCCCATAATCCAGCAGCTAATGAAAACCGTTAATTC TGTTCTCTTTTTATGATTTCTGCCTTGCAACTTCAGTCTCAGGTTTCCAAACACTAGGAATATT CTTGCTATCTGCACTCCCCTTGGCATATTTTCTAATGTTATTGTTTTCTAGCCTTTTTATACGG CTATATACTTATTCACTTCTTTTGAGGCAAGCCCTTCCACCTTTTGAGGAGCTGTGCCTTCACA ACTCAGTTTTGAGTCCTTGGTTCAAATTTGAGTTCAGTTATTCTTTTCTCATATATAAAAATCC AAATAGTTAATTCCGCCAAGGTGTTATAGAGAAGTCCTTTTGCCTTTTTTGGAAACAAAATTCT GGTGGGGGTCGAAATTGGATTTTTGCAGCAGAGCATTCATACCCATGATTTTTTTGCTCTCTCC CAGGCACAGACAATGGAGATGATGTATCGTATAATTGCACAAGAGCTCAAGGCCATGAATATTA AGAATGCACACCCTCAAGATTACTTGAACTTCTATTGTCTGGGCAATCGAGAAGAATCATCATC ATCAAATGGCAGCCCTGAATCTAACGATAAAAGTGCAGCGGTAATTTTTTCAATCTTCATCATC TTTTTTAAGATAACATTATCTCAATTACATTGCTAATATCAGTACCTTCTCGCTGGTTGGTATC TTTTCATCGTCCGAACTCATAGCGTGGGTAGTAAGATTTATTCTTACTCTTTACATGTAAAAAG AACCTTGGTTTCGTTTAACTTGCTTGAAAAATGCTCATCCATTGGTTAGGAAGGTTGCTTTTAT ACTGTCATATTGGCTGGCTCTTTTGATGATCTGAACTTGTGCTGTAATTTTTTTTGTCCCAGTC ATATATATTTACACATTCCAAGATATTTCTTTCCGTTAGTTGACAATATGATACTGAGTTTTTG TCACTTCACTCTACTTTTGCTCTCTCATAATCTACTTGTCACGAGGATAGATCCATTTTTTTTT CCTTTTGAGAAGTCACTATGTATACACATACTTATTTTCCATTTCCCTGTTCTTTACATTCACA GGCCTTGGCTAGAAAATACCGGCGTTTTATGATCTATGTTCATGCAAAGGGGATGATTGTAGAT GATGAATATGTTATTCTGGGGTCAGCAAACATCAACCAAAGATCTTTGGCTGGTTCCAGAGATA CTGAAATTGCCATGGGCGCATACCAGCCTCACCACACATGGTCTACAAAGGGGGGTCATCCTCG CGGTCAG

			
						 Conservation Information
					
						Conserved circRNAs
						
							NA						
					
						PMCS
						0.123285949

Conservation Information
Conserved circRNAs	NA
PMCS	0.123285949

			
				
						 Functional Information
					

				
						Coding potential
						Y
					

						Potential coding position
						
							21393545-21397122(+)
21396990-21393541(+)
21393587-21397014(-)
21393640-21397124(-)
						
					

						Potential amino acid sequence
						
							MATHDEETRKFFKHSSVICVLSPRYASSKLSIFKQQVVGTLFTHHQKCVLVDTQAWGNKRKITA
FIGGLDLCDGRYDTPEHRLFKDLDTVFDNDYHNPTFPSGAKGGPRQPWHDLHCRIDGPAAYDVL
KNFEQRWRKATKWRERFRKVSHWKDDALIKLERISWILSPSPTIPNDDISLRVSKEEDPENWHV
QVFRSIDSGSLKGFPSDCKEASKQNLICRKDLIIDKSIHTAYVRAIRSAQHFIYIENQYFLGSS
YAWPSYVNSGADNLVPIELALKIASKIRAGERFAVYVVIPMWPEGVPTAASVQEILFFQTMEMM
YRIIAQELKAMNIKNAHPQDYLNFYCLGNREESSSSNGSPESNDKSAAALARKYRRFMIYVHAK
GMIVDDEYVILGSANINQRSLAGSRDTEIAMGAYQPHHTWSTKGGHPRGQGGVMATHDEETRKF
FKHSSVICVLSPRYASSKLSIFKQQVVGTLFTHHQKCVLVDTQAWGNKRKITAFIGGLDLCDGR
YDTPEHRLFKDLDTVFDNDYHNPTFPSGAKGGPRQPWHDLHCRIDGPAAYDVLKNFEQRWRKAT
KWRERFRKVSHWKDDALIKLERISWILSPSPTIPNDDISLRVSKEEDPENWHVQVFRSIDSGSL
KGFPSDCKEASKQNLICRKDLIIDKSIHTAYVRAIRSAQHFIYIENQYFLGSSYAWPSYVNSGA
DNLVPIELALKIASKIRAGERFAVYVVIPMWPEGVPTAASVQEILFFQTMEMMYRIIAQELKAM
NIKNAHPQDYLNFYCLGNREESSSSNGSPESNDKSAAALARKYRRFMIYVHAKGMIVDDEYVIL
GSANINQRSLAGSRDTEIAMGAYQPHHTWSTKGGHPRGQGGVMATHDEETRKFFKHSSVICVLS
PRYASSKLSIFKQQVVGTLFTHHQKCVLVDTQAWGNKRKITAFIGGLDLCDGRYDTPEHRLFKD
LDTVFDNDYHNPTFPSGAKGGPRQPWHDLHCRIDGPAAYDVLKNFEQRWRKATKWRERFRKVSH
WKDDALIKLERISWILSPSPTIPNDDISLRVSKEEDPENWHVQVFRSIDSGSLKGFPSDCKEAS
KQNLICRKDLIIDKSIHTAYVRAIRSAQHFIYIENQYFLGSSYAWPSYVNSGADNLVPIELALK
IASKIRAGERFAVYVVIPMWPEGVPTAASVQEILFFQTMEMMYRIIAQELKAMNIKNAHPQDYL
NFYCLGNREESSSSNGSPESNDKSAAALARKYRRFMIYVHAKGMIVDDEYVILGSANINQRSLA
GSRDTEIAMGAYQPHHTWSTKGGHPRGQGGVMATHDEETRKFFKHSSVICVLSPRYASSKLSIF
KQQVVGTLFTHHQKCVLVDTQAWGNKRKITAFIGGLDLCDGRYDTPEHRLFKDLDTVFDNDYHN
PTFPSGAKGGPRQPWHDLHCRIDGPAAYDVLKNFEQRWRKATKWRERFRKVSHWKDDALIKLER
ISWILSPSPTIPNDDISLRVSKEEDPENWHVQVFRSIDSGSLKGFPSDCKEASKQNLICRKDLI
IDKSIHTAYVRAIRSAQHFIYIENQYFLGSSYAWPSYVNSGADNLVPIELALKIASKIRAGERF
AVYVVIPMWPEGVPTAASVQEILFFQTMEMMYRIIAQELKAMNIKNAHPQDYLNFYCLGNREES
SSSNGSPESNDKSAAALARKYRRFMIYVHAKGMIVDDEYVILGSANINQRSLAGSRDTEIAMGA
YQPHHTWSTKGGHPRGQ(+)
MMNMLFWGQQTSTKDLWLVPEILKLPWAHTSLTTHGLQRGVILAVRVE*(+)
MLEEFSSFFIMCRHHSTLTARMTPLCRPCVVRLVCAHGNFSISGTSQRSLVDVC*(-)
MLSLLLAYRGERTQMTEECLKNFLVSSSCVAITPP*(-)
						
					

						Sponge-miRNAs
						
							NA						
					

						circRNA-miRNA-mRNA network
						 VISUALIZATION
					

						Potential function description
						NA
					

			
		

Functional Information
Coding potential	Y
Potential coding position	21393545-21397122(+) 21396990-21393541(+) 21393587-21397014(-) 21393640-21397124(-)
Potential amino acid sequence	MATHDEETRKFFKHSSVICVLSPRYASSKLSIFKQQVVGTLFTHHQKCVLVDTQAWGNKRKITA FIGGLDLCDGRYDTPEHRLFKDLDTVFDNDYHNPTFPSGAKGGPRQPWHDLHCRIDGPAAYDVL KNFEQRWRKATKWRERFRKVSHWKDDALIKLERISWILSPSPTIPNDDISLRVSKEEDPENWHV QVFRSIDSGSLKGFPSDCKEASKQNLICRKDLIIDKSIHTAYVRAIRSAQHFIYIENQYFLGSS YAWPSYVNSGADNLVPIELALKIASKIRAGERFAVYVVIPMWPEGVPTAASVQEILFFQTMEMM YRIIAQELKAMNIKNAHPQDYLNFYCLGNREESSSSNGSPESNDKSAAALARKYRRFMIYVHAK GMIVDDEYVILGSANINQRSLAGSRDTEIAMGAYQPHHTWSTKGGHPRGQGGVMATHDEETRKF FKHSSVICVLSPRYASSKLSIFKQQVVGTLFTHHQKCVLVDTQAWGNKRKITAFIGGLDLCDGR YDTPEHRLFKDLDTVFDNDYHNPTFPSGAKGGPRQPWHDLHCRIDGPAAYDVLKNFEQRWRKAT KWRERFRKVSHWKDDALIKLERISWILSPSPTIPNDDISLRVSKEEDPENWHVQVFRSIDSGSL KGFPSDCKEASKQNLICRKDLIIDKSIHTAYVRAIRSAQHFIYIENQYFLGSSYAWPSYVNSGA DNLVPIELALKIASKIRAGERFAVYVVIPMWPEGVPTAASVQEILFFQTMEMMYRIIAQELKAM NIKNAHPQDYLNFYCLGNREESSSSNGSPESNDKSAAALARKYRRFMIYVHAKGMIVDDEYVIL GSANINQRSLAGSRDTEIAMGAYQPHHTWSTKGGHPRGQGGVMATHDEETRKFFKHSSVICVLS PRYASSKLSIFKQQVVGTLFTHHQKCVLVDTQAWGNKRKITAFIGGLDLCDGRYDTPEHRLFKD LDTVFDNDYHNPTFPSGAKGGPRQPWHDLHCRIDGPAAYDVLKNFEQRWRKATKWRERFRKVSH WKDDALIKLERISWILSPSPTIPNDDISLRVSKEEDPENWHVQVFRSIDSGSLKGFPSDCKEAS KQNLICRKDLIIDKSIHTAYVRAIRSAQHFIYIENQYFLGSSYAWPSYVNSGADNLVPIELALK IASKIRAGERFAVYVVIPMWPEGVPTAASVQEILFFQTMEMMYRIIAQELKAMNIKNAHPQDYL NFYCLGNREESSSSNGSPESNDKSAAALARKYRRFMIYVHAKGMIVDDEYVILGSANINQRSLA GSRDTEIAMGAYQPHHTWSTKGGHPRGQGGVMATHDEETRKFFKHSSVICVLSPRYASSKLSIF KQQVVGTLFTHHQKCVLVDTQAWGNKRKITAFIGGLDLCDGRYDTPEHRLFKDLDTVFDNDYHN PTFPSGAKGGPRQPWHDLHCRIDGPAAYDVLKNFEQRWRKATKWRERFRKVSHWKDDALIKLER ISWILSPSPTIPNDDISLRVSKEEDPENWHVQVFRSIDSGSLKGFPSDCKEASKQNLICRKDLI IDKSIHTAYVRAIRSAQHFIYIENQYFLGSSYAWPSYVNSGADNLVPIELALKIASKIRAGERF AVYVVIPMWPEGVPTAASVQEILFFQTMEMMYRIIAQELKAMNIKNAHPQDYLNFYCLGNREES SSSNGSPESNDKSAAALARKYRRFMIYVHAKGMIVDDEYVILGSANINQRSLAGSRDTEIAMGA YQPHHTWSTKGGHPRGQ(+) MMNMLFWGQQTSTKDLWLVPEILKLPWAHTSLTTHGLQRGVILAVRVE(+) MLEEFSSFFIMCRHHSTLTARMTPLCRPCVVRLVCAHGNFSISGTSQRSLVDVC(-) MLSLLLAYRGERTQMTEECLKNFLVSSSCVAITPP*(-)
Sponge-miRNAs	NA
circRNA-miRNA-mRNA network	VISUALIZATION
Potential function description	NA

			
						 Other Information
					
						References
						Chu et al., 2017

circRNA

Detail information of Os09g0543100_circ_g.6

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