Detailed infomation of each circRNA
General Information | |
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CircRNA Name | BGIOSGA028463_circ_g.2 |
ID in PlantcircBase | osi_circ_017796 |
Alias | Chr08:15188779_15190014(MH63RS2) |
Organism | Oryza sativa ssp. indica |
Position | chr8: 15593034-15594264 JBrowse» |
Reference genome | Oryza_indica.ASM465v1.42 |
Type | ei-circRNA |
Identification method | CIRCexplorer2 |
Parent gene | BGIOSGA028463 |
Parent gene annotation | NA |
Parent gene strand | + |
Alternative splicing | BGIOSGA028463_circ_g.1 BGIOSGA028463_circ_g.3 |
Support reads | NA |
Tissues | root, leaf, panicle |
Exon boundary | No-Yes |
Splicing signals | GT-CA |
Number of exons covered | BGIOSGA028463-TA:5 |
Conservation Information | |
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Conserved circRNAs |
osa_circ_036749 zma_circ_002506 zma_circ_001688* zma_circ_008041 |
PMCS |
Functional Information | |
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Coding potential | N |
Potential coding position |
NA |
Potential amino acid sequence |
NA |
Sponge-miRNAs | NA |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | NA |
Other Information | |
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References | Zhou et al., 2021 |