Detailed infomation of each circRNA
General Information | |
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CircRNA Name | Zm00001d019922_circ_g.1 |
ID in PlantcircBase | zma_circ_002506 |
Alias | circ1581 |
Organism | Zea mays |
Position | chr7: 76568565-76569737 JBrowse» |
Reference genome | AGPv4.38 |
Type | u-circRNA |
Identification method | CIRCexplor2 |
Parent gene | Zm00001d019922 |
Parent gene annotation |
r-interacting factor1 |
Parent gene strand | - |
Alternative splicing | Zm00001d019922_circ_g.2 Zm00001d019922_circ_g.3 |
Support reads | 2 |
Tissues | seedling leaves |
Exon boundary | No-Yes |
Splicing signals | CT-TA |
Number of exons covered | Zm00001d019922_T010:5 Zm00001d019922_T002:5 Zm00001d019922_T007:1 Zm00001d019922_T013:5 Zm00001d019922_T005:5 Zm00001d019922_T004:5 Zm00001d019922_T011:5 Zm00001d019922_T001:4 Zm00001d019922_T008:5 Zm00001d019922_T014:5 Zm00001d019922_T012:4 Zm00001d019922_T006:5 Zm00001d019922_T009:5 Zm00001d019922_T003:5 |
Conservation Information | |
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Conserved circRNAs | osi_circ_017796 |
PMCS | 0.152234953 |
Functional Information | |
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Coding potential | N |
Potential coding position |
NA |
Potential amino acid sequence |
NA |
Sponge-miRNAs | NA |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | NA |
Other Information | |
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References | Chen et al., 2017b |