Detailed infomation of each circRNA
General Information | |
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CircRNA Name | 1_circ_ag.5 |
ID in PlantcircBase | ath_circ_001485 |
Alias | NA |
Organism | Arabidpsis thaliana |
Position | chr1: 2849796-2853679 JBrowse» |
Reference genome | TAIR10.38 |
Type | ag-circRNA |
Identification method | CIRI |
Parent gene | NA |
Parent gene annotation | NA |
Parent gene strand | NA |
Alternative splicing | AT1G08890_circ_g.1 1_circ_ag.2 1_circ_ag.3 AT1G08890_circ_g.4 1_circ_ag.6 AT1G08890_circ_g.7 AT1G08900_circ_g.1 AT1G08900_circ_g.2 |
Support reads | 2 |
Tissues | root |
Exon boundary | Yes-Yes |
Splicing signals | GT-AG |
Number of exons covered | NA |
Conservation Information | |
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Conserved circRNAs | NA |
PMCS | 0.338958658 |
Functional Information | |
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Coding potential | N |
Potential coding position |
NA |
Potential amino acid sequence |
NA |
Sponge-miRNAs | ath-miR5632-3p |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | NA |
Other Information | |
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References | Chu et al., 2017 |