Splice junction sequence |
ATTTCAGGATATTATTTAATTCTCTCATTTGCCAAATATTTCTCTATAGCTGCTTTTCTTTGAA CAAGAAATTAATGGAGGTTATGGACTAGCTCTTCAGgtatcaccctgacaagaatgctagtaac ccagaagcatcagaactcttcaaagaggttgcatattcatatagtatcttgtcagatcctgaga aacggagg
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Assembled circRNA sequence |
Yes
The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).
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Full-length trsnacripts |
Transcript length: 114 Transcript exons: 18043256-18043338,18044714-18044744 GTATCACCCTGACAAGAATGCTAGTAACCCAGAAGCATCAGAACTCTTCAAAGAGGTTGCATAT TCATATAGTATCTTGTCAGAATTAATGGAGGTTATGGACTAGCTCTTCAG
Transcript length: 475 Transcript exons: 18043256-18043379,18044120-18044202,18044292-18044403,18 044475-18044579,18044694-18044744 GTATCACCCTGACAAGAATGCTAGTAACCCAGAAGCATCAGAACTCTTCAAAGAGGTTGCATAT TCATATAGTATCTTGTCAGATCCTGAGAAACGGAGGCAATATGATACTGCTGGTTTTGAGGCAT TGGAGAATGAAGGAATGGATATGGAAATTGACTTATCTAATCTTGGAACTGTGAACACAATGTT TGCTGCACTTTTCAGCAAGCTCGGTGTTCCAATCAAGACCACAGTATCTCCTAATGTTCTTGAA GAAGCTATGAGTGGAACAGTTACAGTGAGACCTCTCCCAGTTGGATCATCAGCAACGGGAAAGG TTGACAAGCAAAGTGCTCATTTTTATGGTGTAACAATAAGTGAAGAACAAGCTCAGTCAGGCAT TGTAGTCAGAGTCACCTCAGCCGCACAAAGTAAATTTAAGCTGCTTTTCTTTGAACAAGAAATT AATGGAGGTTATGGACTAGCTCTTCAG
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Genomic sequence |
GTATCACCCTGACAAGAATGCTAGTAACCCAGAAGCATCAGAACTCTTCAAAGAGGTTGCATAT TCATATAGTATCTTGTCAGATCCTGAGAAACGGAGGCAATATGATACTGCTGGTTTTGAGGTGC TATTCTCATAATCTCATGCTGACTACCAGACTATTTTCGAACAGTTTTTTTTGTGTGTATTTTG CTTTTACTCCAATGGTTCTGCATTCTTCTCCTTTTCTGATCAATCAATAAGGAGAAGTTTGGCT GGGATAAATGACCAGCAAGGTGATTTTTGGTGGTGCTGCACCGACATGTATCATACTGTTGCTG TGTATTTATTAGACCATGTGATAACTGATGAGATTTTTGGATGCTTATTTATCTCCAATCCTTT CTTCTGTTGCAATGAAGATTAGCTAAGGCAGCTTGGTATATAACGTCGTAGACTCATAGAGAGA GATTTAATCCCTGGAATCTGTCAAAGAAGAAATGGAGATTACTCATCTAGCTTGATATTTATTG TCATAGATAGACAATCCCTGGAAACCACTTAAGAGGTAATGGAGAACCTGTATCCTCTAAACAA TGACAAACTATTAGAAGCATTTCCACCATGTATAACTATTTTAATTCCAAAACCATTTGACTAA GTACCTTTGTCATGGATAATATGCTTAAGATGATAATTGTACCAAGTAGCCAAGGGCCACAGCT TATCCTTTACAAATTTGAACTCAGTGGCATTTTTTTTGGGCACTTCAATTATTTTGGGCGTGTA GGTTAAGATGTGTTTGCCAAGTTTCACATAGTTGGCAGAAATAATGTAACTTTGTTGGTTTGTA ATCTAACCATCTGTTGTAATATGCTTTCTTAGGCATTGGAGAATGAAGGAATGGATATGGAAAT TGACTTATCTAATCTTGGAACTGTGAACACAATGTTTGCTGCACTTTTCAGGTGACTGTAGCAT CTGTATGAATTGTTTTCTAGAAAGAATCGAGGATCACTAATTGCCTGCTAACTTTCTTACATAT TATACCATTTAGCAAGCTCGGTGTTCCAATCAAGACCACAGTATCTCCTAATGTTCTTGAAGAA GCTATGAGTGGAACAGTTACAGTGAGACCTCTCCCAGTTGGATCATCAGCAACGGGAAAGGTTC TGCCAATACCAGTTTTATGGTCTTGTTTATAATGGGACGGCTACCATATATATTTTTCTATTTA TAGGTTGACAAGCAAAGTGCTCATTTTTATGGTGTAACAATAAGTGAAGAACAAGCTCAGTCAG GCATTGTAGTCAGAGTCACCTCAGCCGCACAAAGTAAATTTAAGGTATGAGGTTGATTCTTCCT TCAATTGCTCTGGAATTGAAGCTTTTATGTTCTGCATCTCTTTGAATTTCAGGATATTATTTAA TTCTCTCATTTGCCAAATATTTCTCTATAGCTGCTTTTCTTTGAACAAGAAATTAATGGAGGTT ATGGACTAGCTCTTCAG |