Detailed infomation of each circRNA
| General Information | |
|---|---|
| CircRNA Name | Zm00001d041070_circ_g.3 |
| ID in PlantcircBase | zma_circ_007597 |
| Alias | Zm03circ00031, zma_circ_0001096, GRMZM2G319465_C1 |
| Organism | Zea mays |
| Position | chr3: 94785721-94790667 JBrowse» |
| Reference genome | AGPv4.38 |
| Type | u-circRNA |
| Identification method | CIRI2, find_circ |
| Parent gene | Zm00001d041070 |
| Parent gene annotation |
5-methylthioadenosine/S-adenosylhomocysteine deaminase |
| Parent gene strand | + |
| Alternative splicing | Zm00001d041070_circ_igg.1 Zm00001d041070_circ_igg.2 Zm00001d041070_circ_g.1 Zm00001d041070_circ_g.2 Zm00001d041070_circ_g.4 Zm00001d041070_circ_g.5 Zm00001d041070_circ_g.6 Zm00001d041070_circ_g.7 Zm00001d041070_circ_g.8 Zm00001d041070_circ_g.9 |
| Support reads | NA |
| Tissues | leaf, endosperm, root |
| Exon boundary | No-Yes |
| Splicing signals | GT-AG |
| Number of exons covered | Zm00001d041070_T001:4 |
| Conservation Information | |
|---|---|
| Conserved circRNAs | NA |
| PMCS | 0.077007144 |
| Functional Information | |
|---|---|
| Coding potential | N |
| Potential coding position |
NA |
| Potential amino acid sequence |
NA |
| Sponge-miRNAs | NA |
| circRNA-miRNA-mRNA network | VISUALIZATION |
| Potential function description | responsive to drought stress |
| Other Information | |
|---|---|
| References | Han et al., 2020; Ma et al., 2021b;Zhang et al., 2019 |