Splice junction sequence |
ATCTATCTCTCCTGGTCTACTTGGAGCTTGAGGAAGCATGTCAGCATCATTCTCATCAGGTTTG ATTAAGCCCACATAGCTTTGCCAGTTAAGCCACCAGctgtagcccaagtggattttctgtattt atctcccgactgtaatcctgtaaaaagtactccaccaatggaggtgtatgcaccaaggattgta tagcactg
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Assembled circRNA sequence |
Yes
The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).
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Full-length trsnacripts |
Transcript length: 919 Transcript exons: 3837549-3837941,3838514-3838609,3838707-3838766,3839592- 3839736,3840288-3840512 CTGTAGCCCAAGTGGATTTTCTGTATTTATCTCCCGACTGTAATCCTGTAAAAAGTACTCCACC AATGGAGGTGTATGCACCAAGGATTGTATAGCACTGTTCATGAAACATGTATTTCCCAAGTTAT GTAAACCACTCAGTCCATGGATATCATCCTTTGTGCCATTGGAGAAACTATAACCATCTTCTGC GTCCCTTAATAAAGGACTAAAGCTATTATCTTGGGAAAAACTGGAACCAAATCCAGATGAAAAA CCATTTGAAAATGCAGGACCTCCAGCAATTGAAAACGATGATGTTGAGGGTTCCAACGGAATTA ATGCTAGTTCATTATTTGATCTTGTACCAAGATCCGAACACCAAGCATCATCTGCCTTTGCCTC TATGATAATCTCCTGGTCCATCATCAGTTGAGCTTCCTCAACCGTCTCATTAAGATTTATCAGT TTTTTTCCCTTTGTCTTTTGGTAAAAATCCCAGATGTCGATCTTAGACTGTTCGACGGACAAAA GTGAGCAAACCAAGCTATAGAGCTCACTAACTTTGGCCTTTCTACTAATTCTGATAATTCTCTC CAAGCTGTCTCTTCCATCAAATAATTTCAGACGGAGGGGATAGACATCCACAATGTAACTTCTG GAAGTTGGACTACTACAAATTACTCTTCTTGAGAGTTCTGGTCCACCTTTGTACCATTCATGTA GCTTCCTCCATACTTCCTGGGGCACCAAAGCGTAGTCATCTCCTTCCCTCAGGGTTCTTTGAAG CTCTGGCTCATCACCAATACTGCTGCTTTCCTCTGAAACTAGCTTTGAGTTATCTATCTCTCCT GGTCTACTTGGAGCTTGAGGAAGCATGTCAGCATCATTCTCATCAGGTTTGATTAAGCCCACAT AGCTTTGCCAGTTAAGCCACCAG
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Genomic sequence |
CTGTAGCCCAAGTGGATTTTCTGTATTTATCTCCCGACTGTAATCCTGTAAAAAGTACTCCACC AATGGAGGTGTATGCACCAAGGATTGTATAGCACTGTTCATGAAACATGTATTTCCCAAGTTAT GTAAACCACTCAGTCCATGGATATCATCCTTTGTGCCATTGGAGAAACTATAACCATCTTCTGC GTCCCTTAATAAAGGACTAAAGCTATTATCTTGGGAAAAACTGGAACCAAATCCAGATGAAAAA CCATTTGAAAATGCAGGACCTCCAGCAATTGAAAACGATGATGTTGAGGGTTCCAACGGAATTA ATGCTAGTTCATTATTTGATCTTGTACCAAGATCCGAACACCAAGCATCATCTGCCTTTGCCTC TATGATAATCTGCAAGCATAAAGAAAGAAGTTGCATCTTCAGTTAATGTACAGACAGAAAATAG AAAATTGTTGGCTTGCCAACAAAATAGGGGTAAATCGTTAAGAATAATAAGATTCAGGACACCC ACAATACAGATAGTGAACATCTTAGAAGCAATAGTACATATTCATACCAGTACATATTCATACC CGAACATTGCAATGGTGCAAATGTAAACCATATTCATATGATAAAACACACTGATCAGAAGCAT ATTCATATGATAAAGACAAATGAGCCAACTTTATTAACTCAAAAACAATTCTCATGTCAACCAT AATAGAACTTGAAAAGTGCAAATGTAAATTAAGATAATAAATTAAGCAATATTTAGGAGTTAGA CAATTTATGACAAAGTCATTATCCATGTGCAAGGTGACATCCTAAGGCAGACAGCAGACCATAG ATGAAAAGGGCGCATAGCAACAATAACAACAAAAAGCCAGCGACCATCTCGCTGCCAGAATAAA GGAAACAATCATAGGTTTCAGCAGATAAAACAATAGATATGTGAATGGGAATTGCATAGTGCAT AATACCTCCTGGTCCATCATCAGTTGAGCTTCCTCAACCGTCTCATTAAGATTTATCAGTTTTT TTCCCTTTGTCTTTTGGTAAAAATCCCAGATGTCGATCTGAAGCATTAAAGTAGATGGAGCAAA GAATCATATACATAACCATAACTGACACTACAGATAGAGATATTAGATGAATAAATGATGATGC TTGTACCTTAGACTGTTCGACGGACAAAAGTGAGCAAACCAAGCTATAGAGCTCACTAACTTTG GCCTGAAAGCACCAAATACAAACGTCAAAAAATAAGTCAAGTCAATTGCACAAGAAACTAGAGT ATCCAAGAAAGAAGATAATAGAAAGTTAACAAATTTACTGTTCAACAAAAGAGTATCTAAGAAA GAAGATAGTAGAAAGTTCATCTTTCTACTTTTTTAGTAAAAGTGCTATTAGTTCAAGCAGTTAG TAAAACCAGCATTCAAAGTATTTGCCATTGCGCATCAAATTTGTAACATTTTTTTCCTTCTGGT AATAGTCAACCAAAAATATCAGATCAAATTCTGAAATTCAAGGGCTCAGCATACCAAAGTAGAA GATCGCAACAAGCAGGTGATGAACAGATGCGATTTCTTTGACACTTCATCACAAAGAGGGAATC CTCATTGCTTTATTTCATATAATGCAAATGTGTAAGCACTGGTTTTTATTTGACAAATGTGACT CTCCAACAATGTGATCAAGGTATAAAGAATGCCTAAACTGATCATCTAACCTATCAAATATAAG AAATGCTCCGATTTGTCCCACACAATAAGCACAGATCAAGGAGGCATGATGGCTAAGATAAGCT AATGTGAAATACAACCAAATGTTAACCACACAACCTCTTTGAAGCAATAAATTAGGGCTGGATA GTGGAATCATCATTGTAATAACTACACTATTGATTTCATCATCAATGGATAACTATGGAGGGAC TACATCCCAAAAGAAATGCCAAACATTATGAAACCAGGGAAGTTTCAAGGAGCATCAGTCGCAT TATTGACGGTTAATTACATATGAAGCACAATGTCACAATATAAATCAAATATACCATACCTTTC TACTAATTCTGATAATTCTCTCCAAGCTGTCTCTTCCATCAAATAATTTCAGACGGAGGGGATA GACATCCACAATGTAACTTCTGGAAGTTGGACTACTACAAATTACTCTTCTTGAGAGTTCTGGT CCACCTTTGTACCTGAAAAGTATTCATGTGTCCATGAGTTGATGATCCCAATTGAAGAAGAATG TATTCAAGTACATTAGGCCATGGACATTAGGGATAAGTTATGGTTACACTAGTATTCTGGCATA ATCCATTGAAGAGCAACCTGACCTCATGAGTGAAAACGCGTACAGTATGCATTTACCAGTTAGC ACATCATTGTTTTAAACAAATATCAACAGGAAACAGAAAAATTGAATAGGGCAACAACTAATTG CCAACAGACTGAGCAAACAGGACTACAAACCAGGCTTTTTTGGTTTGCACCTAAGTGGAGCACA TGCAATCTACAATGTGGCATATCAAAGCCCTGGCAGCCCAAGCTTGGCCAAATGAACAAGAGCG CCTAAAGAAAATAAGAACTAAAAAAATGTCGCAAAATGGAACTGTAGTTATATGATCAAATTTT AATCAGGCAACCATTTTCTCTCATGACAAAAAGTAAAGAGACAAACCCGTGGTTTTATGGGTAC AACAAACTTTCTGACATGAAGGCAGTTAAACAGACATATAACATTGCATACCATTCATGTAGCT TCCTCCATACTTCCTGGGGCACCAAAGCGTAGTCATCTCCTTCCCTCAGGGTTCTTTGAAGCTC TGGCTCATCACCAATACTGCTGCTTTCCTCTGAAACTAGCTTTGAGTTATCTATCTCTCCTGGT CTACTTGGAGCTTGAGGAAGCATGTCAGCATCATTCTCATCAGGTTTGATTAAGCCCACATAGC TTTGCCAGTTAAGCCACCAG |