Plant Circular RNA Database

Detail information of Os10g0160000_circ_g.1

			
						 General Information
					
						CircRNA Name
						Os10g0160000_circ_g.1
					
						ID in PlantcircBase
						osa_circ_006254
					
						Alias
						NA
					
						Organism
						
							Oryza sativa						
					
						Position
						
							chr10: 3832334-3836021  JBrowse»						
					
						Reference genome
						
							IRGSP-1.0.38						
					
						Type  
						
							e-circRNA							
									
						Identification method
						CIRCexplorer
					
						Parent gene
						
							Os10g0160000						
					
						Parent gene annotation
						
							Similar to Ubiquitin carboxyl-terminal hydrolase 12 (EC 3.1.2.15
) (Ubiquitin thiolesterase 12) (Ubiquitin-specific processing pr
otease 12) (Deubiquitinating enzyme 12). (Os10t0160000-01);Simil
ar to Ubiquitin carboxyl-terminal hydrolase. (Os10t0160000-02)
							
						Parent gene strand
						-
					
						Alternative splicing
						
							Os10g0160000_circ_g.2 Os10g0160000_circ_g.3 Os10g0160000_circ_g.4 Os10g0160000_circ_g.5 Os10g0160000_circ_g.6 Os10g0160000_circ_g.7 Os10g0160000_circ_g.8 						
					
						Support reads
						1
					
						Tissues
						root
					
						Exon boundary  
						
							Yes-Yes							"Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.

						Splicing signals  
						
							CT-AC							The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.

						Number of exons covered
						Os10t0160000-01:5

General Information
CircRNA Name	Os10g0160000_circ_g.1
ID in PlantcircBase	osa_circ_006254
Alias	NA
Organism	Oryza sativa
Position	chr10: 3832334-3836021 JBrowse»
Reference genome	IRGSP-1.0.38
Type	e-circRNA
Identification method	CIRCexplorer
Parent gene	Os10g0160000
Parent gene annotation	Similar to Ubiquitin carboxyl-terminal hydrolase 12 (EC 3.1.2.15 ) (Ubiquitin thiolesterase 12) (Ubiquitin-specific processing pr otease 12) (Deubiquitinating enzyme 12). (Os10t0160000-01);Simil ar to Ubiquitin carboxyl-terminal hydrolase. (Os10t0160000-02)
Parent gene strand	-
Alternative splicing	Os10g0160000_circ_g.2 Os10g0160000_circ_g.3 Os10g0160000_circ_g.4 Os10g0160000_circ_g.5 Os10g0160000_circ_g.6 Os10g0160000_circ_g.7 Os10g0160000_circ_g.8
Support reads	1
Tissues	root
Exon boundary	Yes-Yes "Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.
Splicing signals	CT-AC The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.
Number of exons covered	Os10t0160000-01:5

			
						 Experimental Information
					
						Sanger sequencing for BSS  
						
							NA							Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".

						PCR primers for BSS   
						
							NA							PCR primers used in back-splicing site (BSS) validation.

						Sanger sequencing for FL   
						
							NA							Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.

						PCR primers for FL   
						
							NA							 PCR primers used in full-length (FL) sequence validation.

Experimental Information
Sanger sequencing for BSS	NA Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".
PCR primers for BSS	NA PCR primers used in back-splicing site (BSS) validation.
Sanger sequencing for FL	NA Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.
PCR primers for FL	NA PCR primers used in full-length (FL) sequence validation.

			
				
						 Sequences
					

				
						Splice junction sequence  
						
							CATCAGGACGGCCATCGGCATCCTTTGCTTCAATATATGGTTTCTTTTTCACACGGTTGAGATC
TTCATGCAGACCATCCAATAGAAATGCAAGTAACTCctttgcatacgcagagtagtgaccacca
cccattccgccgtaatgattgatcactgcatagagttcataaatggggggctgatcacctcttg
agtgattt

									
								

					

						Assembled circRNA sequence  
						
							NA
The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).

					

						Full-length trsnacripts
						
							NA						
					

						Genomic sequence
						
							CTTTGCATACGCAGAGTAGTGACCACCACCCATTCCGCCGTAATGATTGATCACTGCATAGAGT
TCATAAATGGGGGGCTGATCACCTCTTGAGTGATTTGCATATCTACTCATATCAAGATCATGGA
TTGGAAAGTTGACAAAGGTATCAAGCTTGTTCTTCATAAACCGGCTGTATGAGAACCTTTTTAA
GTGAACTACCAATATCTCAGGCAACCTCCATAAGTCAAGCTTTTTGCTGGCTTGCTTGTGCTCC
GTGCATCTCGGACAGTACCTGCTCAGATAAGCAAGAAAAGTGATGCAAGCTCAGACATTGACCA
AGGTGCTTTCTTTATGGAAAAAACAGAGCAATTTGCAAGTATCAGTCAATAAGACAGAAATAAT
ACTAACCACATGTCATCAGGGCCCAGAGGTTCATCCTTCAGAAAAGCATCTAAGCATGAAAATA
AATTGACTGCTTCTTGCCGATTTTTCTTTGACATAAATCCAGGCTTGAAGACCACAGAAAGTTC
ATCCATGTACTTAATGTCATATACTTCATGTTCTCTATCAGACCAGTCCATTAATAACCTCATG
GTCGACCCAGGAACACCGTTAGAATCTGCATCAATATGCTCTCTCTTATTAGCTTTATCATCAG
TCAACCAAAGCTGAAATGGCAAAACCTCTTCATCAGCTGCTTCCTCATCCACATTTGATGTAGA
TACATCTTCCTCACAGGTGACACCATTGTCTGTCAGTACAATACCATCCAGGCTAGGTCCATTG
CTATTTAACTTGGTTGCAGATTCATCCAGAGTATGTACTTTTGCCCGCACAAATGGAGCCAGAA
GTGAAGAGACAGTTGCATAAATATCAGCTTTTCTTGTAGAGTCACTTGGAATACAAGTCACAAG
AGGGCTTCCAATTAGCTTCCGACTAAGATTAAACATGGACTCTGAAGTATATCTGCATAAATTA
ACAAAACAAATCAATGTGTAAGCACAAAAATGGAAACCAGTTCCAAGGAATAGAATAGTAGAAA
AAAGAAAATCACTACCATCAAATACATGGCATGTATCTGAGGTAAGAAATCTCAATGTCTGTAG
CATTTTTTTTGTCAGCTACACTAAACTATTCTCACGAATCATAAGCACAAAATTCTCACTAGAA
CCAAAATTCAAATAAGGGCAGGGTTCACCTATTCTAAGGAGCAACAATAGATGAACGGACATCA
TGGAAACACATATGTGGTCCTTGCTAACATAATTACAGACTCACCTATCAACCACCCGATGCAG
GATCTCTACCCTCAAGAGATTTTCAGAGCCAACCGGTAGCCTGTAAGCAACAAGTTTGTCTTCA
TCTTTTACATGACAAAGTGGTTCTGATGGGTTCCAATAGCGGTAAATCCGATGATCATATACCT
AAAGAATATGATGTTTATTAGCTATTTACTGAAAAAGAGTTATGCTTCAAATAACACCATTGCT
ACATAAGAACAAACTGGATTTTTTACCTCTGCAAGTAACAGTGTTTCGCAACTTTGTAAGCAAC
ACATAACACTCAGAGATTTTATAAGATCTCCACAAACTCCATTCTTTTGTACCTTCACAGTGTA
AGGCATGGGAAGGGCATCTCCAGTACCACTAAATACAGTTACATTAATCATGCGAGTAACTGTT
GAGGGCAATGGCAGTGACAAGTACATGAATGGGTCAAATGTAACTGAGATTTTCTTACAATCTG
GGCAAACCAAAGTGGACTTGTACTGACCCTGAAACATCAACCAAATGAATTGATGTTACTGCAG
AGATGTGACAATTAACAATTATCGTACACCACAAAATACGCCAAAGGGGAAAATGCTACTGAAA
TTTGAACATGTATATACTCCCTCCTTATAAAAATATAAGGTGTATTCACTGTTATTAACGTCAA
GACTTTGACCAACAATTTCTTTATTACTAACATACATATCATTTATGTGACTCAAAAGCATATC
ATAAGAAAGTTCCTTTGAATGTGAATCTATTAACATTGATTTTGCATCACAAAAATTATATTCT
AACATAATAATTGTTGGTTAAAGCCTAATCCAAAAATAACATATGCCTTCTATTTTTGTATGGA
GGAAATATTACAGAATGAAAGCAAAATAACTATACTATCTCTCCCACTTCCTAAAATAGCTTCA
AGAAACATCAATCATGTTTCACCATCAGAGAGCAATCATTAATCAACGCTATAACATTGTTCTT
TAGTATTTTCTTCTATTGAAAATACCCATCACTGCTTCATAAATCGACCAAGTAATAACCAACA
ATTGGTTCAAGCCAGATTCAACTCAAGACATAGCTTGATACAACGGTGCCAACCACATAAGTGG
GTTCACAGGTCGACCCACTTGTCCCAACATATATACTAACCGATCAGAAATATCCAACAAATTC
TACAGTGCTAACTAATAATACCAAGCACCAGAACTAGCTAGTATCTTGCACTCAGCAGCAAGTA
AAAGGCTGAGCAGTTTGTGAGGTAAATCTTGGTACGCTACATCTGCTTGCAGACAGACCTGGCC
TAATCTTTCAGGCCTAGTCTCAAGAAGATAATCATTGCAAAAGCAGCAAGCAATGGAAAAGGTA
TACTGATGAGTGGTGAATAGTTGTGAGCATACATAAACCTAATACCAAAATGAGCCATGCCACA
TTCAGGATTTTTGTATTTTCATTTCCAGTTTGATTTTAATTCTCTTTGTTCGGTAAATGGCTTT
AGATCATTATGCCATGTTAAGGTACAAAATATGCCAACCAGCAACCAATCATCATGCCAACGGC
TCAAGCACATCTCACGCCCCTACCAAACCACAACCCTACATTCCCGACTAGATTTTCTATTACA
TCTCTTTCCTCCCTCGGTTCCACAGTTTCACCAAATCAATTCAACGACAGAGCAGCGCAAGGCA
TGGCAGGCAGTCACAGAGCGGCAGTGGCACAGCAGGCCAGCAAAGGAGCAACGTCAAGCGGCAC
AGGTCAGCATTGGCATGTTCCGAGGAGAAACAGATACTGTTTTCTAACTGAACCAAACTGAATT
ATTCGGTTCAGGAGCTCTTTTTTGTGCAGCAATCATTCTGGTTACCACTATTTCAAAACCGGTT
GTCAAAAAATAGAAAACATCCAACAAAATTAACCAAAAACTGAATATCCCCACTACTTATGAGG
GCTCTACAGAAAATAGTACCCGTTCTCATCCCAAAAACGGTTAAATTTTTGTGATATAACCACT
GTTGAAATTTCACCTGATCCCTGCCTCAAAAAATAACCTGTTTCTTTAAAAAAGAAAATAAAAA
CCTGTTGTCTGATTACAAATAGTTTCAGCATTACCAAGTTCATTTCCATAATACGAAGATGCCT
AAAGAACAACCAGAGATAGGGAACCCTTATTCAAAAAAATGCAGAAATATCTTTAAAATAATTC
CAGATCCAAACAATATTTGCTCCACATGGTAAACATATACACGTAGCAAAGATTTCATTACCTG
GAATTTATCAACAATTATAGAATCATTTCGAGCTTTATGGTAATTCCAGCATTCCTCAGCAAGT
TCTTCATCAGGACGGCCATCGGCATCCTTTGCTTCAATATATGGTTTCTTTTTCACACGGTTGA
GATCTTCATGCAGACCATCCAATAGAAATGCAAGTAACTC
						
					

			
		

Sequences
Splice junction sequence	CATCAGGACGGCCATCGGCATCCTTTGCTTCAATATATGGTTTCTTTTTCACACGGTTGAGATC TTCATGCAGACCATCCAATAGAAATGCAAGTAACTCctttgcatacgcagagtagtgaccacca cccattccgccgtaatgattgatcactgcatagagttcataaatggggggctgatcacctcttg agtgattt
Assembled circRNA sequence	NA The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).
Full-length trsnacripts	NA
Genomic sequence	CTTTGCATACGCAGAGTAGTGACCACCACCCATTCCGCCGTAATGATTGATCACTGCATAGAGT TCATAAATGGGGGGCTGATCACCTCTTGAGTGATTTGCATATCTACTCATATCAAGATCATGGA TTGGAAAGTTGACAAAGGTATCAAGCTTGTTCTTCATAAACCGGCTGTATGAGAACCTTTTTAA GTGAACTACCAATATCTCAGGCAACCTCCATAAGTCAAGCTTTTTGCTGGCTTGCTTGTGCTCC GTGCATCTCGGACAGTACCTGCTCAGATAAGCAAGAAAAGTGATGCAAGCTCAGACATTGACCA AGGTGCTTTCTTTATGGAAAAAACAGAGCAATTTGCAAGTATCAGTCAATAAGACAGAAATAAT ACTAACCACATGTCATCAGGGCCCAGAGGTTCATCCTTCAGAAAAGCATCTAAGCATGAAAATA AATTGACTGCTTCTTGCCGATTTTTCTTTGACATAAATCCAGGCTTGAAGACCACAGAAAGTTC ATCCATGTACTTAATGTCATATACTTCATGTTCTCTATCAGACCAGTCCATTAATAACCTCATG GTCGACCCAGGAACACCGTTAGAATCTGCATCAATATGCTCTCTCTTATTAGCTTTATCATCAG TCAACCAAAGCTGAAATGGCAAAACCTCTTCATCAGCTGCTTCCTCATCCACATTTGATGTAGA TACATCTTCCTCACAGGTGACACCATTGTCTGTCAGTACAATACCATCCAGGCTAGGTCCATTG CTATTTAACTTGGTTGCAGATTCATCCAGAGTATGTACTTTTGCCCGCACAAATGGAGCCAGAA GTGAAGAGACAGTTGCATAAATATCAGCTTTTCTTGTAGAGTCACTTGGAATACAAGTCACAAG AGGGCTTCCAATTAGCTTCCGACTAAGATTAAACATGGACTCTGAAGTATATCTGCATAAATTA ACAAAACAAATCAATGTGTAAGCACAAAAATGGAAACCAGTTCCAAGGAATAGAATAGTAGAAA AAAGAAAATCACTACCATCAAATACATGGCATGTATCTGAGGTAAGAAATCTCAATGTCTGTAG CATTTTTTTTGTCAGCTACACTAAACTATTCTCACGAATCATAAGCACAAAATTCTCACTAGAA CCAAAATTCAAATAAGGGCAGGGTTCACCTATTCTAAGGAGCAACAATAGATGAACGGACATCA TGGAAACACATATGTGGTCCTTGCTAACATAATTACAGACTCACCTATCAACCACCCGATGCAG GATCTCTACCCTCAAGAGATTTTCAGAGCCAACCGGTAGCCTGTAAGCAACAAGTTTGTCTTCA TCTTTTACATGACAAAGTGGTTCTGATGGGTTCCAATAGCGGTAAATCCGATGATCATATACCT AAAGAATATGATGTTTATTAGCTATTTACTGAAAAAGAGTTATGCTTCAAATAACACCATTGCT ACATAAGAACAAACTGGATTTTTTACCTCTGCAAGTAACAGTGTTTCGCAACTTTGTAAGCAAC ACATAACACTCAGAGATTTTATAAGATCTCCACAAACTCCATTCTTTTGTACCTTCACAGTGTA AGGCATGGGAAGGGCATCTCCAGTACCACTAAATACAGTTACATTAATCATGCGAGTAACTGTT GAGGGCAATGGCAGTGACAAGTACATGAATGGGTCAAATGTAACTGAGATTTTCTTACAATCTG GGCAAACCAAAGTGGACTTGTACTGACCCTGAAACATCAACCAAATGAATTGATGTTACTGCAG AGATGTGACAATTAACAATTATCGTACACCACAAAATACGCCAAAGGGGAAAATGCTACTGAAA TTTGAACATGTATATACTCCCTCCTTATAAAAATATAAGGTGTATTCACTGTTATTAACGTCAA GACTTTGACCAACAATTTCTTTATTACTAACATACATATCATTTATGTGACTCAAAAGCATATC ATAAGAAAGTTCCTTTGAATGTGAATCTATTAACATTGATTTTGCATCACAAAAATTATATTCT AACATAATAATTGTTGGTTAAAGCCTAATCCAAAAATAACATATGCCTTCTATTTTTGTATGGA GGAAATATTACAGAATGAAAGCAAAATAACTATACTATCTCTCCCACTTCCTAAAATAGCTTCA AGAAACATCAATCATGTTTCACCATCAGAGAGCAATCATTAATCAACGCTATAACATTGTTCTT TAGTATTTTCTTCTATTGAAAATACCCATCACTGCTTCATAAATCGACCAAGTAATAACCAACA ATTGGTTCAAGCCAGATTCAACTCAAGACATAGCTTGATACAACGGTGCCAACCACATAAGTGG GTTCACAGGTCGACCCACTTGTCCCAACATATATACTAACCGATCAGAAATATCCAACAAATTC TACAGTGCTAACTAATAATACCAAGCACCAGAACTAGCTAGTATCTTGCACTCAGCAGCAAGTA AAAGGCTGAGCAGTTTGTGAGGTAAATCTTGGTACGCTACATCTGCTTGCAGACAGACCTGGCC TAATCTTTCAGGCCTAGTCTCAAGAAGATAATCATTGCAAAAGCAGCAAGCAATGGAAAAGGTA TACTGATGAGTGGTGAATAGTTGTGAGCATACATAAACCTAATACCAAAATGAGCCATGCCACA TTCAGGATTTTTGTATTTTCATTTCCAGTTTGATTTTAATTCTCTTTGTTCGGTAAATGGCTTT AGATCATTATGCCATGTTAAGGTACAAAATATGCCAACCAGCAACCAATCATCATGCCAACGGC TCAAGCACATCTCACGCCCCTACCAAACCACAACCCTACATTCCCGACTAGATTTTCTATTACA TCTCTTTCCTCCCTCGGTTCCACAGTTTCACCAAATCAATTCAACGACAGAGCAGCGCAAGGCA TGGCAGGCAGTCACAGAGCGGCAGTGGCACAGCAGGCCAGCAAAGGAGCAACGTCAAGCGGCAC AGGTCAGCATTGGCATGTTCCGAGGAGAAACAGATACTGTTTTCTAACTGAACCAAACTGAATT ATTCGGTTCAGGAGCTCTTTTTTGTGCAGCAATCATTCTGGTTACCACTATTTCAAAACCGGTT GTCAAAAAATAGAAAACATCCAACAAAATTAACCAAAAACTGAATATCCCCACTACTTATGAGG GCTCTACAGAAAATAGTACCCGTTCTCATCCCAAAAACGGTTAAATTTTTGTGATATAACCACT GTTGAAATTTCACCTGATCCCTGCCTCAAAAAATAACCTGTTTCTTTAAAAAAGAAAATAAAAA CCTGTTGTCTGATTACAAATAGTTTCAGCATTACCAAGTTCATTTCCATAATACGAAGATGCCT AAAGAACAACCAGAGATAGGGAACCCTTATTCAAAAAAATGCAGAAATATCTTTAAAATAATTC CAGATCCAAACAATATTTGCTCCACATGGTAAACATATACACGTAGCAAAGATTTCATTACCTG GAATTTATCAACAATTATAGAATCATTTCGAGCTTTATGGTAATTCCAGCATTCCTCAGCAAGT TCTTCATCAGGACGGCCATCGGCATCCTTTGCTTCAATATATGGTTTCTTTTTCACACGGTTGA GATCTTCATGCAGACCATCCAATAGAAATGCAAGTAACTC

			
						 Conservation Information
					
						Conserved circRNAs
						
							NA						
					
						PMCS
						0.126328514

Conservation Information
Conserved circRNAs	NA
PMCS	0.126328514

			
				
						 Functional Information
					

				
						Coding potential
						Y
					

						Potential coding position
						
							3836010-3832380(+)
3834025-3832336(-)
						
					

						Potential amino acid sequence
						
							MQVTPLHTQSSDHHPFRRND*(+)
MYLSLPLPSTVTRMINVTVFSGTGDALPMPYTVKVQKNGVCGDLIKSLSVMCCLQSCETLLLAE
VYDHRIYRYWNPSEPLCHVKDEDKLVAYRLPVGSENLLRVEILHRVVDRYTSESMFNLSRKLIG
SPLVTCIPSDSTRKADIYATVSSLLAPFVRAKVHTLDESATKLNSNGPSLDGIVLTDNGVTCEE
DVSTSNVDEEAADEEVLPFQLWLTDDKANKREHIDADSNGVPGSTMRLLMDWSDREHEVYDIKY
MDELSVVFKPGFMSKKNRQEAVNLFSCLDAFLKDEPLGPDDMWYCPRCTEHKQASKKLDLWRLP
EILVVHLKRFSYSRFMKNKLDTFVNFPIHDLDMSRYANHSRGDQPPIYELYAVINHYGGMGGGH
YSAYAKELLAFLLDGLHEDLNRVKKKPYIEAKDADGRPDEELAEECWNYHKARNDSIIVDKFQG
QYKSTLVCPDCKKISVTFDPFMYLSLPLPSTVTRMINVTVFSGTGDALPMPYTVKVQKNGVCGD
LIKSLSVMCCLQSCETLLLAEVYDHRIYRYWNPSEPLCHVKDEDKLVAYRLPVGSENLLRVEIL
HRVVDRYTSESMFNLSRKLIGSPLVTCIPSDSTRKADIYATVSSLLAPFVRAKVHTLDESATKL
NSNGPSLDGIVLTDNGVTCEEDVSTSNVDEEAADEEVLPFQLWLTDDKANKREHIDADSNGVPG
STMRLLMDWSDREHEVYDIKYMDELSVVFKPGFMSKKNRQEAVNLFSCLDAFLKDEPLGPDDMW
YCPRCTEHKQASKKLDLWRLPEILVVHLKRFSYSRFMKNKLDTFVNFPIHDLDMSRYANHSRGD
QPPIYELYAVINHYGGMGGGHYSAYAKELLAFLLDGLHEDLNRVKKKPYIEAKDADGRPDEELA
EECWNYHKARNDSIIVDKFQGQYKSTLVCPDCKKISVTFDPFMYLSLPLPSTVTRMINVTVFSG
TGDALPMPYTVKVQKNGVCGDLIKSLSVMCCLQSCETLLLAEVYDHRIYRYWNPSEPLCHVKDE
DKLVAYRLPVGSENLLRVEILHRVVDRYTSESMFNLSRKLIGSPLVTCIPSDSTRKADIYATVS
SLLAPFVRAKVHTLDESATKLNSNGPSLDGIVLTDNGVTCEEDVSTSNVDEEAADEEVLPFQLW
LTDDKANKREHIDADSNGVPGSTMRLLMDWSDREHEVYDIKYMDELSVVFKPGFMSKKNRQEAV
NLFSCLDAFLKDEPLGPDDMWYCPRCTEHKQASKKLDLWRLPEILVVHLKRFSYSRFMKNKLDT
FVNFPIHDLDMSRYANHSRGDQPPIYELYAVINHYGGMGGGHYSAYAKELLAFLLDGLHEDLNR
VKKKPYIEAKDADGRPDEELAEECWNYHKARNDSIIVDKFQGQYKSTLVCPDCKKISVTFDPFM
YLSLPLPSTVTRMINVTVFSGTGDALPMPYTVKVQKNGVCGDLIKSLSVMCCLQSCETLLLAEV
YDHRIYRYWNPSEPLCHVKDEDKLVAYRLPVGSENLLRVEILHRVVDRYTSESMFNLSRKLIGS
PLVTCIPSDSTRKADIYATVSSLLAPFVRAKVHTLDESATKLNSNGPSLDGIVLTDNGVTCEED
VSTSNVDEEAADEEVLPFQLWLTDDKANKREHIDADSNGVPGSTMRLLMDWSDREHEVYDIKYM
DELSVVFKPGFMSKKNRQEAVNLFSCLDAFLKDEPLGPDDMWYCPRCTEHKQASKKLDLWRLPE
ILVVHLKRFSYSRFMKNKLDTFVNFPIHDLDMSRYANHSRGDQPPIYELYAVINHYGGMGGGHY
SAYAK(-)
						
					

						Sponge-miRNAs
						
							NA						
					

						circRNA-miRNA-mRNA network
						 VISUALIZATION
					

						Potential function description
						NA
					

			
		

Functional Information
Coding potential	Y
Potential coding position	3836010-3832380(+) 3834025-3832336(-)
Potential amino acid sequence	MQVTPLHTQSSDHHPFRRND*(+) MYLSLPLPSTVTRMINVTVFSGTGDALPMPYTVKVQKNGVCGDLIKSLSVMCCLQSCETLLLAE VYDHRIYRYWNPSEPLCHVKDEDKLVAYRLPVGSENLLRVEILHRVVDRYTSESMFNLSRKLIG SPLVTCIPSDSTRKADIYATVSSLLAPFVRAKVHTLDESATKLNSNGPSLDGIVLTDNGVTCEE DVSTSNVDEEAADEEVLPFQLWLTDDKANKREHIDADSNGVPGSTMRLLMDWSDREHEVYDIKY MDELSVVFKPGFMSKKNRQEAVNLFSCLDAFLKDEPLGPDDMWYCPRCTEHKQASKKLDLWRLP EILVVHLKRFSYSRFMKNKLDTFVNFPIHDLDMSRYANHSRGDQPPIYELYAVINHYGGMGGGH YSAYAKELLAFLLDGLHEDLNRVKKKPYIEAKDADGRPDEELAEECWNYHKARNDSIIVDKFQG QYKSTLVCPDCKKISVTFDPFMYLSLPLPSTVTRMINVTVFSGTGDALPMPYTVKVQKNGVCGD LIKSLSVMCCLQSCETLLLAEVYDHRIYRYWNPSEPLCHVKDEDKLVAYRLPVGSENLLRVEIL HRVVDRYTSESMFNLSRKLIGSPLVTCIPSDSTRKADIYATVSSLLAPFVRAKVHTLDESATKL NSNGPSLDGIVLTDNGVTCEEDVSTSNVDEEAADEEVLPFQLWLTDDKANKREHIDADSNGVPG STMRLLMDWSDREHEVYDIKYMDELSVVFKPGFMSKKNRQEAVNLFSCLDAFLKDEPLGPDDMW YCPRCTEHKQASKKLDLWRLPEILVVHLKRFSYSRFMKNKLDTFVNFPIHDLDMSRYANHSRGD QPPIYELYAVINHYGGMGGGHYSAYAKELLAFLLDGLHEDLNRVKKKPYIEAKDADGRPDEELA EECWNYHKARNDSIIVDKFQGQYKSTLVCPDCKKISVTFDPFMYLSLPLPSTVTRMINVTVFSG TGDALPMPYTVKVQKNGVCGDLIKSLSVMCCLQSCETLLLAEVYDHRIYRYWNPSEPLCHVKDE DKLVAYRLPVGSENLLRVEILHRVVDRYTSESMFNLSRKLIGSPLVTCIPSDSTRKADIYATVS SLLAPFVRAKVHTLDESATKLNSNGPSLDGIVLTDNGVTCEEDVSTSNVDEEAADEEVLPFQLW LTDDKANKREHIDADSNGVPGSTMRLLMDWSDREHEVYDIKYMDELSVVFKPGFMSKKNRQEAV NLFSCLDAFLKDEPLGPDDMWYCPRCTEHKQASKKLDLWRLPEILVVHLKRFSYSRFMKNKLDT FVNFPIHDLDMSRYANHSRGDQPPIYELYAVINHYGGMGGGHYSAYAKELLAFLLDGLHEDLNR VKKKPYIEAKDADGRPDEELAEECWNYHKARNDSIIVDKFQGQYKSTLVCPDCKKISVTFDPFM YLSLPLPSTVTRMINVTVFSGTGDALPMPYTVKVQKNGVCGDLIKSLSVMCCLQSCETLLLAEV YDHRIYRYWNPSEPLCHVKDEDKLVAYRLPVGSENLLRVEILHRVVDRYTSESMFNLSRKLIGS PLVTCIPSDSTRKADIYATVSSLLAPFVRAKVHTLDESATKLNSNGPSLDGIVLTDNGVTCEED VSTSNVDEEAADEEVLPFQLWLTDDKANKREHIDADSNGVPGSTMRLLMDWSDREHEVYDIKYM DELSVVFKPGFMSKKNRQEAVNLFSCLDAFLKDEPLGPDDMWYCPRCTEHKQASKKLDLWRLPE ILVVHLKRFSYSRFMKNKLDTFVNFPIHDLDMSRYANHSRGDQPPIYELYAVINHYGGMGGGHY SAYAK(-)
Sponge-miRNAs	NA
circRNA-miRNA-mRNA network	VISUALIZATION
Potential function description	NA

			
						 Other Information
					
						References
						Chu et al., 2017

circRNA

Detail information of Os10g0160000_circ_g.1

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