Detailed infomation of each circRNA
General Information | |
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CircRNA Name | BGIOSGA001731_circ_g.18 |
ID in PlantcircBase | osi_circ_009358 |
Alias | Chr01:13413207_13414351(MH63RS2) |
Organism | Oryza sativa ssp. indica |
Position | chr1: 14572979-14574123 JBrowse» |
Reference genome | Oryza_indica.ASM465v1.42 |
Type | ei-circRNA |
Identification method | CIRI2 |
Parent gene | BGIOSGA001731 |
Parent gene annotation | NA |
Parent gene strand | - |
Alternative splicing | BGIOSGA001731_circ_g.12 BGIOSGA001731_circ_g.13 BGIOSGA001731_circ_g.14 BGIOSGA001731_circ_g.15 BGIOSGA001731_circ_g.16 BGIOSGA001731_circ_g.17 BGIOSGA001731_circ_g.19 BGIOSGA001731_circ_g.20 BGIOSGA001731_circ_g.21 BGIOSGA001731_circ_g.22 BGIOSGA001731_circ_g.23 BGIOSGA001731_circ_g.24 BGIOSGA001731_circ_g.25 BGIOSGA001731_circ_g.26 BGIOSGA001731_circ_g.27 BGIOSGA001731_circ_g.28 BGIOSGA001731_circ_g.29 |
Support reads | NA |
Tissues | root, leaf, panicle |
Exon boundary | No-Yes |
Splicing signals | CT-TA |
Number of exons covered | BGIOSGA001731-TA:3 |
Conservation Information | |
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Conserved circRNAs | NA |
PMCS |
Functional Information | |
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Coding potential | N |
Potential coding position |
NA |
Potential amino acid sequence |
NA |
Sponge-miRNAs | NA |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | NA |
Other Information | |
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References | Zhou et al., 2021 |