Detailed infomation of each circRNA
General Information | |
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CircRNA Name | AT2G02960_circ_g.1 |
ID in PlantcircBase | ath_circ_012622 |
Alias | 2:862308-863995 |
Organism | Arabidpsis thaliana |
Position | chr2: 862308-863995 JBrowse» |
Reference genome | TAIR10.38 |
Type | u-circRNA |
Identification method | find_circ; CIRI2 |
Parent gene | AT2G02960 |
Parent gene annotation |
RING/FYVE/PHD zinc finger superfamily protein |
Parent gene strand | - |
Alternative splicing | AT2G02960_circ_g.2 AT2G02960_circ_g.3 AT2G02960_circ_g.4 |
Support reads | 1/1 |
Tissues | root;flower |
Exon boundary | No-Yes |
Splicing signals | CT-AC |
Number of exons covered | AT2G02960.3:7 AT2G02960.6:7 AT2G02960.2:7 AT2G02960.5:6 AT2G02960.1:7 AT2G02960.4:7 |
Conservation Information | |
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Conserved circRNAs | NA |
PMCS | 0.265517092 |
Functional Information | |
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Coding potential | NA |
Potential coding position |
NA |
Potential amino acid sequence |
NA |
Sponge-miRNAs | ath-miR5658 |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | NA |
Other Information | |
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References | Philips et al., 2020 |