Detailed infomation of each circRNA
General Information | |
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CircRNA Name | AT2G02960_circ_g.3 |
ID in PlantcircBase | ath_circ_012624 |
Alias | NA |
Organism | Arabidpsis thaliana |
Position | chr2: 863318-863601 JBrowse» |
Reference genome | TAIR10.38 |
Type | i-circRNA |
Identification method | CIRCexplorer, circseq_cup |
Parent gene | AT2G02960 |
Parent gene annotation |
RING/FYVE/PHD zinc finger superfamily protein |
Parent gene strand | - |
Alternative splicing | AT2G02960_circ_g.1 AT2G02960_circ_g.2 AT2G02960_circ_g.4 |
Support reads | 5 |
Tissues | seedlings |
Exon boundary | No-No |
Splicing signals | CT-AT |
Number of exons covered | 0 |
Conservation Information | |
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Conserved circRNAs | NA |
PMCS | 0.531212735 |
Functional Information | |
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Coding potential | N |
Potential coding position |
NA |
Potential amino acid sequence |
NA |
Sponge-miRNAs | NA |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | NA |
Other Information | |
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References | Pan et al., 2017 |