Detailed infomation of each circRNA
General Information | |
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CircRNA Name | Os06g0194900_circ_g.2 |
ID in PlantcircBase | osa_circ_030034 |
Alias | Os_ciR2312 |
Organism | Oryza sativa |
Position | chr6: 4796778-4796897 JBrowse» |
Reference genome | IRGSP-1.0.38 |
Type | ue-circRNA |
Identification method | find_circ |
Parent gene | Os06g0194900 |
Parent gene annotation |
Sucrose synthase 2 (EC 2.4.1.13). (Os06t0194900-01);Sucrose synt hase 2 (EC 2.4.1.13). (Os06t0194900-02);Sucrose synthase 2 (EC 2 .4.1.13). (Os06t0194900-03);Similar to Sucrose synthase 2. (Os06 t0194900-04) |
Parent gene strand | - |
Alternative splicing | Os06g0194900_circ_g.1 Os06g0194900_circ_g.3 Os06g0194900_circ_g.4 Os06g0194900_circ_g.5 Os06g0194900_circ_g.6 Os06g0194900_circ_g.7 Os06g0194900_circ_g.8 Os06g0194900_circ_g.9 Os06g0194900_circ_g.10 |
Support reads | 5 |
Tissues | root |
Exon boundary | No-No |
Splicing signals | CT-AC |
Number of exons covered | Os06t0194900-02:1 Os06t0194900-01:1 Os06t0194900-03:1 Os06t0194900-04:1 |
Conservation Information | |
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Conserved circRNAs | NA |
PMCS | 0.111111111 |
Functional Information | |
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Coding potential | N |
Potential coding position |
NA |
Potential amino acid sequence |
NA |
Sponge-miRNAs | NA |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | NA |
Other Information | |
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References | Ye et al., 2015 |