Detailed infomation of each circRNA
General Information | |
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CircRNA Name | Os06g0194900_circ_g.9 |
ID in PlantcircBase | osa_circ_030041 |
Alias | NA |
Organism | Oryza sativa |
Position | chr6: 4797726-4797960 JBrowse» |
Reference genome | IRGSP-1.0.38 |
Type | u-circRNA |
Identification method | circseq_cup |
Parent gene | Os06g0195025 |
Parent gene annotation |
Hypothetical protein. (Os06t0195025-00) |
Parent gene strand | + |
Alternative splicing | Os06g0194900_circ_g.1 Os06g0194900_circ_g.2 Os06g0194900_circ_g.3 Os06g0194900_circ_g.4 Os06g0194900_circ_g.5 Os06g0194900_circ_g.6 Os06g0194900_circ_g.7 Os06g0194900_circ_g.8 Os06g0194900_circ_g.10 |
Support reads | 3 |
Tissues | root |
Exon boundary | No-No |
Splicing signals | TG-GG |
Number of exons covered | Os06t0194900-04:1 Os06t0194900-02:1 Os06t0194900-01:1 Os06t0194900-03:1 Os06t0195025-00:1 Os06t0194900-04:1 Os06t0194900-02:1 Os06t0194900-01:1 Os06t0194900-03:1 |
Conservation Information | |
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Conserved circRNAs | osi_circ_013120 |
PMCS | 0.345089823 |
Functional Information | |
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Coding potential | N |
Potential coding position |
NA |
Potential amino acid sequence |
NA |
Sponge-miRNAs | NA |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | NA |
Other Information | |
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References | Ye et al., 2016 |