Detailed infomation of each circRNA
General Information | |
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CircRNA Name | Os06g0194900_circ_g.5 |
ID in PlantcircBase | osa_circ_030037 |
Alias | Os_ciR10725 |
Organism | Oryza sativa |
Position | chr6: 4797450-4797766 JBrowse» |
Reference genome | IRGSP-1.0.38 |
Type | u-circRNA |
Identification method | find_circ |
Parent gene | Os06g0195025 |
Parent gene annotation |
Hypothetical protein. (Os06t0195025-00) |
Parent gene strand | + |
Alternative splicing | Os06g0194900_circ_g.1 Os06g0194900_circ_g.2 Os06g0194900_circ_g.3 Os06g0194900_circ_g.4 Os06g0194900_circ_g.6 Os06g0194900_circ_g.7 Os06g0194900_circ_g.8 Os06g0194900_circ_g.9 Os06g0194900_circ_g.10 |
Support reads | 2 |
Tissues | root |
Exon boundary | No-No |
Splicing signals | GT-AG |
Number of exons covered | Os06t0194900-03:2 Os06t0194900-02:2 Os06t0194900-01:2 Os06t0194900-04:2 Os06t0194900-03:2 Os06t0194900-02:2 Os06t0195025-00:2 Os06t0194900-01:2 Os06t0194900-04:2 |
Conservation Information | |
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Conserved circRNAs | NA |
PMCS | 0.329767771 |
Functional Information | |
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Coding potential | N |
Potential coding position |
NA |
Potential amino acid sequence |
NA |
Sponge-miRNAs | NA |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | NA |
Other Information | |
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References | Ye et al., 2015 |