Detailed infomation of each circRNA
| General Information | |
|---|---|
| CircRNA Name | Zm00001d032708_circ_g.1 |
| ID in PlantcircBase | zma_circ_000813 |
| Alias | circ241 |
| Organism | Zea mays |
| Position | chr1: 235652313-235657077 JBrowse» |
| Reference genome | AGPv4.38 |
| Type | u-circRNA |
| Identification method | CIRI |
| Parent gene | Zm00001d032708 |
| Parent gene annotation |
Serine/threonine protein phosphatase 2A regulatory subunit B''al pha |
| Parent gene strand | - |
| Alternative splicing | Zm00001d032708_circ_g.2 Zm00001d032708_circ_g.3 Zm00001d032708_circ_g.4 |
| Support reads | 3 |
| Tissues | seedling leaves |
| Exon boundary | No-Yes |
| Splicing signals | CT-TA |
| Number of exons covered | Zm00001d032708_T012:7 Zm00001d032708_T019:8 Zm00001d032708_T009:8 Zm00001d032708_T020:7 Zm00001d032708_T018:8 Zm00001d032708_T021:8 Zm00001d032708_T011:7 Zm00001d032708_T024:8 Zm00001d032708_T017:7 Zm00001d032708_T013:5 Zm00001d032708_T003:8 Zm00001d032708_T025:8 Zm00001d032708_T022:7 Zm00001d032708_T007:8 Zm00001d032708_T004:7 Zm00001d032708_T014:8 Zm00001d032708_T002:8 Zm00001d032708_T026:8 Zm00001d032708_T005:8 Zm00001d032708_T010:7 Zm00001d032708_T006:8 Zm00001d032708_T008:7 Zm00001d032708_T015:8 Zm00001d032708_T001:7 |
| Conservation Information | |
|---|---|
| Conserved circRNAs | osa_circ_007101 |
| PMCS | 0.004354683 |
| Functional Information | |
|---|---|
| Coding potential | N |
| Potential coding position |
NA |
| Potential amino acid sequence |
NA |
| Sponge-miRNAs | NA |
| circRNA-miRNA-mRNA network | VISUALIZATION |
| Potential function description | NA |
| Other Information | |
|---|---|
| References | Chen et al., 2017b |