Plant Circular RNA Database

Detail information of EPlOSAG00000010309_circ_g.32

			
						 General Information
					
						CircRNA Name
						EPlOSAG00000010309_circ_g.32
					
						ID in PlantcircBase
						osa_circ_021444
					
						Alias
						NA
					
						Organism
						
							Oryza sativa						
					
						Position
						
							chr3: 29382389-29382665  JBrowse»						
					
						Reference genome
						
							IRGSP-1.0.38						
					
						Type  
						
							e-circRNA							
									
						Identification method
						circseq_cup
					
						Parent gene
						
							EPlOSAG00000010309						
					
						Parent gene annotation
						
							ncRNA
							
						Parent gene strand
						+
					
						Alternative splicing
						
							EPlOSAG00000010309_circ_igg.1 EPlOSAG00000010309_circ_igg.2 EPlOSAG00000010309_circ_igg.3 EPlOSAG00000010309_circ_igg.4 EPlOSAG00000010309_circ_igg.5 EPlOSAG00000010309_circ_igg.6 EPlOSAG00000010309_circ_igg.7 EPlOSAG00000010309_circ_igg.8 EPlOSAG00000010309_circ_igg.9 EPlOSAG00000010309_circ_igg.10 EPlOSAG00000010309_circ_igg.11 EPlOSAG00000010309_circ_igg.12 EPlOSAG00000010309_circ_igg.13 EPlOSAG00000010309_circ_igg.14 EPlOSAG00000010309_circ_igg.15 EPlOSAG00000010309_circ_igg.16 EPlOSAG00000010309_circ_igg.17 EPlOSAG00000010309_circ_igg.18 EPlOSAG00000010309_circ_igg.19 EPlOSAG00000010309_circ_igg.20 EPlOSAG00000010309_circ_igg.21 EPlOSAG00000010309_circ_igg.22 EPlOSAG00000010309_circ_igg.23 EPlOSAG00000010309_circ_igg.24 EPlOSAG00000010309_circ_igg.25 EPlOSAG00000010309_circ_igg.26 EPlOSAG00000010309_circ_igg.27 EPlOSAG00000010309_circ_igg.28 EPlOSAG00000010309_circ_igg.29 EPlOSAG00000010309_circ_igg.30 EPlOSAG00000010309_circ_igg.31 EPlOSAG00000010309_circ_igg.32 EPlOSAG00000010309_circ_igg.33 EPlOSAG00000010309_circ_igg.34 EPlOSAG00000010309_circ_igg.35 EPlOSAG00000010309_circ_igg.36 EPlOSAG00000010309_circ_igg.37 EPlOSAG00000046633_circ_ig.1 EPlOSAG00000046633_circ_ig.2 EPlOSAG00000046633_circ_ig.3 EPlOSAG00000010309_circ_g.1 EPlOSAG00000010309_circ_g.2 EPlOSAG00000010309_circ_g.3 EPlOSAG00000010309_circ_g.4 EPlOSAG00000010309_circ_g.5 EPlOSAG00000010309_circ_g.6 EPlOSAG00000010309_circ_g.7 EPlOSAG00000010309_circ_g.8 EPlOSAG00000010309_circ_g.9 EPlOSAG00000010309_circ_g.10 EPlOSAG00000010309_circ_g.11 EPlOSAG00000010309_circ_g.12 EPlOSAG00000010309_circ_g.13 EPlOSAG00000010309_circ_g.14 EPlOSAG00000010309_circ_g.15 EPlOSAG00000010309_circ_g.16 EPlOSAG00000010309_circ_g.17 EPlOSAG00000010309_circ_g.18 EPlOSAG00000010309_circ_g.19 EPlOSAG00000010309_circ_g.20 EPlOSAG00000010309_circ_g.21 EPlOSAG00000010309_circ_g.22 EPlOSAG00000010309_circ_g.23 EPlOSAG00000010309_circ_g.24 EPlOSAG00000010309_circ_g.25 EPlOSAG00000010309_circ_g.26 EPlOSAG00000010309_circ_g.27 EPlOSAG00000010309_circ_g.28 EPlOSAG00000010309_circ_g.29 EPlOSAG00000010309_circ_g.30 EPlOSAG00000010309_circ_g.31 EPlOSAG00000010309_circ_g.33 EPlOSAG00000010309_circ_g.34 EPlOSAG00000010309_circ_g.35 EPlOSAG00000010309_circ_g.36 EPlOSAG00000010309_circ_g.37 EPlOSAG00000010309_circ_g.38 EPlOSAG00000010309_circ_g.39 EPlOSAG00000010309_circ_g.40 EPlOSAG00000010309_circ_g.41 EPlOSAG00000010309_circ_g.42 EPlOSAG00000010309_circ_g.43 EPlOSAG00000010309_circ_g.44 EPlOSAG00000010309_circ_g.45 EPlOSAG00000010309_circ_g.46 EPlOSAG00000010309_circ_g.47 EPlOSAG00000010309_circ_g.48 EPlOSAG00000010309_circ_g.49 EPlOSAG00000010309_circ_g.50 EPlOSAG00000010309_circ_g.51 EPlOSAG00000010309_circ_g.52 EPlOSAG00000010309_circ_g.53 EPlOSAG00000010309_circ_g.54 EPlOSAG00000010309_circ_g.55 EPlOSAG00000010309_circ_g.56 EPlOSAG00000010309_circ_g.57 EPlOSAG00000010309_circ_g.58 EPlOSAG00000010309_circ_g.59 EPlOSAG00000010309_circ_g.60 EPlOSAG00000010309_circ_g.61 EPlOSAG00000010309_circ_g.62 EPlOSAG00000010309_circ_g.63 EPlOSAG00000010309_circ_g.64 EPlOSAG00000010309_circ_g.65 EPlOSAG00000010309_circ_g.66 EPlOSAG00000010309_circ_g.67 EPlOSAG00000010309_circ_g.68 EPlOSAG00000010309_circ_g.69 EPlOSAG00000010309_circ_g.70 EPlOSAG00000010309_circ_g.71 EPlOSAG00000010309_circ_g.72 EPlOSAG00000010309_circ_g.73 EPlOSAG00000010309_circ_g.74 EPlOSAG00000010309_circ_g.75 EPlOSAG00000010309_circ_g.76 EPlOSAG00000010309_circ_g.77 EPlOSAG00000010309_circ_g.78 EPlOSAG00000010309_circ_g.79 EPlOSAG00000010309_circ_g.80 EPlOSAG00000010309_circ_g.81 EPlOSAG00000010309_circ_g.82 EPlOSAG00000010309_circ_g.83 EPlOSAG00000010309_circ_g.84 EPlOSAG00000010309_circ_g.85 EPlOSAG00000010309_circ_g.86 EPlOSAG00000010309_circ_g.87 EPlOSAG00000010309_circ_g.88 EPlOSAG00000010309_circ_g.89 EPlOSAG00000010309_circ_g.90 EPlOSAG00000010309_circ_g.91 EPlOSAG00000010309_circ_g.92 EPlOSAG00000010309_circ_g.93 EPlOSAG00000010309_circ_g.94 EPlOSAG00000010309_circ_g.95 EPlOSAG00000010309_circ_g.96 EPlOSAG00000010309_circ_g.97 EPlOSAG00000010309_circ_g.98 EPlOSAG00000010309_circ_g.99 EPlOSAG00000010309_circ_g.100 EPlOSAG00000010309_circ_g.101 EPlOSAG00000010309_circ_g.102 EPlOSAG00000010309_circ_g.103 EPlOSAG00000010309_circ_g.104 EPlOSAG00000010309_circ_g.105 EPlOSAG00000010309_circ_g.106 EPlOSAG00000010309_circ_g.107 EPlOSAG00000010309_circ_g.108 EPlOSAG00000010309_circ_g.109 EPlOSAG00000010309_circ_g.110 EPlOSAG00000010309_circ_g.111 EPlOSAG00000010309_circ_g.112 EPlOSAG00000010309_circ_g.113 EPlOSAG00000010309_circ_g.114 EPlOSAG00000010309_circ_g.115 EPlOSAG00000010309_circ_g.116 EPlOSAG00000010309_circ_g.117 EPlOSAG00000010309_circ_g.118 EPlOSAG00000010309_circ_g.119 EPlOSAG00000010309_circ_g.120 EPlOSAG00000010309_circ_g.121 EPlOSAG00000010309_circ_g.122 EPlOSAG00000010309_circ_g.123 EPlOSAG00000010309_circ_g.124 EPlOSAG00000010309_circ_g.125 EPlOSAG00000010309_circ_g.126 EPlOSAG00000010309_circ_g.127 EPlOSAG00000010309_circ_g.128 EPlOSAG00000010309_circ_g.129 EPlOSAG00000010309_circ_g.130 EPlOSAG00000010309_circ_g.131 EPlOSAG00000010309_circ_g.132 EPlOSAG00000010309_circ_g.133 EPlOSAG00000010309_circ_g.134 EPlOSAG00000010309_circ_g.135 EPlOSAG00000010309_circ_g.136 EPlOSAG00000010309_circ_g.137 EPlOSAG00000010309_circ_g.138 EPlOSAG00000010309_circ_g.139 EPlOSAG00000010309_circ_g.140 EPlOSAG00000010309_circ_g.141 EPlOSAG00000010309_circ_g.142 EPlOSAG00000010309_circ_g.143 EPlOSAG00000010309_circ_g.144 EPlOSAG00000010309_circ_g.145 EPlOSAG00000010309_circ_g.146 EPlOSAG00000010309_circ_g.147 EPlOSAG00000010309_circ_g.148 EPlOSAG00000010309_circ_g.149 EPlOSAG00000010309_circ_g.150 EPlOSAG00000010309_circ_g.151 EPlOSAG00000010309_circ_g.152 EPlOSAG00000010309_circ_g.153 EPlOSAG00000010309_circ_g.154 EPlOSAG00000010309_circ_g.155 EPlOSAG00000010309_circ_g.156 EPlOSAG00000010309_circ_g.157 EPlOSAG00000010309_circ_g.158 EPlOSAG00000010309_circ_g.159 EPlOSAG00000010309_circ_g.160 EPlOSAG00000010309_circ_g.161 EPlOSAG00000010309_circ_g.162 EPlOSAG00000010309_circ_g.163 EPlOSAG00000010309_circ_g.164 EPlOSAG00000010309_circ_g.165 						
					
						Support reads
						4
					
						Tissues
						root
					
						Exon boundary  
						
							No-No							"Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.

						Splicing signals  
						
							CA-GA							The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.

						Number of exons covered
						EPlOSAT00000050753:1
EPlOSAT00000011697:1
EPlOSAT00000050753:1

General Information
CircRNA Name	EPlOSAG00000010309_circ_g.32
ID in PlantcircBase	osa_circ_021444
Alias	NA
Organism	Oryza sativa
Position	chr3: 29382389-29382665 JBrowse»
Reference genome	IRGSP-1.0.38
Type	e-circRNA
Identification method	circseq_cup
Parent gene	EPlOSAG00000010309
Parent gene annotation	ncRNA
Parent gene strand	+
Alternative splicing	EPlOSAG00000010309_circ_igg.1 EPlOSAG00000010309_circ_igg.2 EPlOSAG00000010309_circ_igg.3 EPlOSAG00000010309_circ_igg.4 EPlOSAG00000010309_circ_igg.5 EPlOSAG00000010309_circ_igg.6 EPlOSAG00000010309_circ_igg.7 EPlOSAG00000010309_circ_igg.8 EPlOSAG00000010309_circ_igg.9 EPlOSAG00000010309_circ_igg.10 EPlOSAG00000010309_circ_igg.11 EPlOSAG00000010309_circ_igg.12 EPlOSAG00000010309_circ_igg.13 EPlOSAG00000010309_circ_igg.14 EPlOSAG00000010309_circ_igg.15 EPlOSAG00000010309_circ_igg.16 EPlOSAG00000010309_circ_igg.17 EPlOSAG00000010309_circ_igg.18 EPlOSAG00000010309_circ_igg.19 EPlOSAG00000010309_circ_igg.20 EPlOSAG00000010309_circ_igg.21 EPlOSAG00000010309_circ_igg.22 EPlOSAG00000010309_circ_igg.23 EPlOSAG00000010309_circ_igg.24 EPlOSAG00000010309_circ_igg.25 EPlOSAG00000010309_circ_igg.26 EPlOSAG00000010309_circ_igg.27 EPlOSAG00000010309_circ_igg.28 EPlOSAG00000010309_circ_igg.29 EPlOSAG00000010309_circ_igg.30 EPlOSAG00000010309_circ_igg.31 EPlOSAG00000010309_circ_igg.32 EPlOSAG00000010309_circ_igg.33 EPlOSAG00000010309_circ_igg.34 EPlOSAG00000010309_circ_igg.35 EPlOSAG00000010309_circ_igg.36 EPlOSAG00000010309_circ_igg.37 EPlOSAG00000046633_circ_ig.1 EPlOSAG00000046633_circ_ig.2 EPlOSAG00000046633_circ_ig.3 EPlOSAG00000010309_circ_g.1 EPlOSAG00000010309_circ_g.2 EPlOSAG00000010309_circ_g.3 EPlOSAG00000010309_circ_g.4 EPlOSAG00000010309_circ_g.5 EPlOSAG00000010309_circ_g.6 EPlOSAG00000010309_circ_g.7 EPlOSAG00000010309_circ_g.8 EPlOSAG00000010309_circ_g.9 EPlOSAG00000010309_circ_g.10 EPlOSAG00000010309_circ_g.11 EPlOSAG00000010309_circ_g.12 EPlOSAG00000010309_circ_g.13 EPlOSAG00000010309_circ_g.14 EPlOSAG00000010309_circ_g.15 EPlOSAG00000010309_circ_g.16 EPlOSAG00000010309_circ_g.17 EPlOSAG00000010309_circ_g.18 EPlOSAG00000010309_circ_g.19 EPlOSAG00000010309_circ_g.20 EPlOSAG00000010309_circ_g.21 EPlOSAG00000010309_circ_g.22 EPlOSAG00000010309_circ_g.23 EPlOSAG00000010309_circ_g.24 EPlOSAG00000010309_circ_g.25 EPlOSAG00000010309_circ_g.26 EPlOSAG00000010309_circ_g.27 EPlOSAG00000010309_circ_g.28 EPlOSAG00000010309_circ_g.29 EPlOSAG00000010309_circ_g.30 EPlOSAG00000010309_circ_g.31 EPlOSAG00000010309_circ_g.33 EPlOSAG00000010309_circ_g.34 EPlOSAG00000010309_circ_g.35 EPlOSAG00000010309_circ_g.36 EPlOSAG00000010309_circ_g.37 EPlOSAG00000010309_circ_g.38 EPlOSAG00000010309_circ_g.39 EPlOSAG00000010309_circ_g.40 EPlOSAG00000010309_circ_g.41 EPlOSAG00000010309_circ_g.42 EPlOSAG00000010309_circ_g.43 EPlOSAG00000010309_circ_g.44 EPlOSAG00000010309_circ_g.45 EPlOSAG00000010309_circ_g.46 EPlOSAG00000010309_circ_g.47 EPlOSAG00000010309_circ_g.48 EPlOSAG00000010309_circ_g.49 EPlOSAG00000010309_circ_g.50 EPlOSAG00000010309_circ_g.51 EPlOSAG00000010309_circ_g.52 EPlOSAG00000010309_circ_g.53 EPlOSAG00000010309_circ_g.54 EPlOSAG00000010309_circ_g.55 EPlOSAG00000010309_circ_g.56 EPlOSAG00000010309_circ_g.57 EPlOSAG00000010309_circ_g.58 EPlOSAG00000010309_circ_g.59 EPlOSAG00000010309_circ_g.60 EPlOSAG00000010309_circ_g.61 EPlOSAG00000010309_circ_g.62 EPlOSAG00000010309_circ_g.63 EPlOSAG00000010309_circ_g.64 EPlOSAG00000010309_circ_g.65 EPlOSAG00000010309_circ_g.66 EPlOSAG00000010309_circ_g.67 EPlOSAG00000010309_circ_g.68 EPlOSAG00000010309_circ_g.69 EPlOSAG00000010309_circ_g.70 EPlOSAG00000010309_circ_g.71 EPlOSAG00000010309_circ_g.72 EPlOSAG00000010309_circ_g.73 EPlOSAG00000010309_circ_g.74 EPlOSAG00000010309_circ_g.75 EPlOSAG00000010309_circ_g.76 EPlOSAG00000010309_circ_g.77 EPlOSAG00000010309_circ_g.78 EPlOSAG00000010309_circ_g.79 EPlOSAG00000010309_circ_g.80 EPlOSAG00000010309_circ_g.81 EPlOSAG00000010309_circ_g.82 EPlOSAG00000010309_circ_g.83 EPlOSAG00000010309_circ_g.84 EPlOSAG00000010309_circ_g.85 EPlOSAG00000010309_circ_g.86 EPlOSAG00000010309_circ_g.87 EPlOSAG00000010309_circ_g.88 EPlOSAG00000010309_circ_g.89 EPlOSAG00000010309_circ_g.90 EPlOSAG00000010309_circ_g.91 EPlOSAG00000010309_circ_g.92 EPlOSAG00000010309_circ_g.93 EPlOSAG00000010309_circ_g.94 EPlOSAG00000010309_circ_g.95 EPlOSAG00000010309_circ_g.96 EPlOSAG00000010309_circ_g.97 EPlOSAG00000010309_circ_g.98 EPlOSAG00000010309_circ_g.99 EPlOSAG00000010309_circ_g.100 EPlOSAG00000010309_circ_g.101 EPlOSAG00000010309_circ_g.102 EPlOSAG00000010309_circ_g.103 EPlOSAG00000010309_circ_g.104 EPlOSAG00000010309_circ_g.105 EPlOSAG00000010309_circ_g.106 EPlOSAG00000010309_circ_g.107 EPlOSAG00000010309_circ_g.108 EPlOSAG00000010309_circ_g.109 EPlOSAG00000010309_circ_g.110 EPlOSAG00000010309_circ_g.111 EPlOSAG00000010309_circ_g.112 EPlOSAG00000010309_circ_g.113 EPlOSAG00000010309_circ_g.114 EPlOSAG00000010309_circ_g.115 EPlOSAG00000010309_circ_g.116 EPlOSAG00000010309_circ_g.117 EPlOSAG00000010309_circ_g.118 EPlOSAG00000010309_circ_g.119 EPlOSAG00000010309_circ_g.120 EPlOSAG00000010309_circ_g.121 EPlOSAG00000010309_circ_g.122 EPlOSAG00000010309_circ_g.123 EPlOSAG00000010309_circ_g.124 EPlOSAG00000010309_circ_g.125 EPlOSAG00000010309_circ_g.126 EPlOSAG00000010309_circ_g.127 EPlOSAG00000010309_circ_g.128 EPlOSAG00000010309_circ_g.129 EPlOSAG00000010309_circ_g.130 EPlOSAG00000010309_circ_g.131 EPlOSAG00000010309_circ_g.132 EPlOSAG00000010309_circ_g.133 EPlOSAG00000010309_circ_g.134 EPlOSAG00000010309_circ_g.135 EPlOSAG00000010309_circ_g.136 EPlOSAG00000010309_circ_g.137 EPlOSAG00000010309_circ_g.138 EPlOSAG00000010309_circ_g.139 EPlOSAG00000010309_circ_g.140 EPlOSAG00000010309_circ_g.141 EPlOSAG00000010309_circ_g.142 EPlOSAG00000010309_circ_g.143 EPlOSAG00000010309_circ_g.144 EPlOSAG00000010309_circ_g.145 EPlOSAG00000010309_circ_g.146 EPlOSAG00000010309_circ_g.147 EPlOSAG00000010309_circ_g.148 EPlOSAG00000010309_circ_g.149 EPlOSAG00000010309_circ_g.150 EPlOSAG00000010309_circ_g.151 EPlOSAG00000010309_circ_g.152 EPlOSAG00000010309_circ_g.153 EPlOSAG00000010309_circ_g.154 EPlOSAG00000010309_circ_g.155 EPlOSAG00000010309_circ_g.156 EPlOSAG00000010309_circ_g.157 EPlOSAG00000010309_circ_g.158 EPlOSAG00000010309_circ_g.159 EPlOSAG00000010309_circ_g.160 EPlOSAG00000010309_circ_g.161 EPlOSAG00000010309_circ_g.162 EPlOSAG00000010309_circ_g.163 EPlOSAG00000010309_circ_g.164 EPlOSAG00000010309_circ_g.165
Support reads	4
Tissues	root
Exon boundary	No-No "Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.
Splicing signals	CA-GA The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.
Number of exons covered	EPlOSAT00000050753:1 EPlOSAT00000011697:1 EPlOSAT00000050753:1

			
						 Experimental Information
					
						Sanger sequencing for BSS  
						
							NA							Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".

						PCR primers for BSS   
						
							NA							PCR primers used in back-splicing site (BSS) validation.

						Sanger sequencing for FL   
						
							NA							Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.

						PCR primers for FL   
						
							NA							 PCR primers used in full-length (FL) sequence validation.

Experimental Information
Sanger sequencing for BSS	NA Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".
PCR primers for BSS	NA PCR primers used in back-splicing site (BSS) validation.
Sanger sequencing for FL	NA Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.
PCR primers for FL	NA PCR primers used in full-length (FL) sequence validation.

			
						 Sequences
					
						Splice junction sequence  
						
							GCTTCACAGAGCAGCGAATACTGTCCGCTTCCAACGGTGGAAGGATAACGGGCCGCCGCACTGC
TGGCCCGCTTGGGTCTCGCAGCCTACTCCAACGGACgcttgtaacccgagcgggggcattaagg
tggtgtggacgttgccgtatggctgcgggcctgggttggcagtgccatagatggcccgcccgtt
ccaagttg

						Assembled circRNA sequence  
						
							Yes
The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).

						Full-length trsnacripts
						
							Transcript length: 277
Transcript exons: 29382389-29382665
ACTTGTAACCCGAGCGGGGGCATTAAGGTGGTGTGGACGTTGCCGTATGGCTGCGGGCCTGGGT
TGGCAGTGCCATAGATGGCCCGCCCGTTCCAAGTTGCGTAGTTGGGCCGGCGGGGCTTGAGCGA
AAGCTCTGGCCTCACGTTTCCCTAGAGTGGCAGGCATTGCGTGAGGCTGGCTTCACAGAGCAGC
GAATACTGTCCGCTTCCAACGGTGGAAGGATAACGGGCCGCCGCACTGCTGGCCCGCTTGGGTC
TCGCAGCCTACTCCAACGGAC
						
						Genomic sequence
						
							GCTTGTAACCCGAGCGGGGGCATTAAGGTGGTGTGGACGTTGCCGTATGGCTGCGGGCCTGGGT
TGGCAGTGCCATAGATGGCCCGCCCGTTCCAAGTTGCGTAGTTGGGCCGGCGGGGCTTGAGCGA
AAGCTCTGGCCTCACGTTTCCCTAGAGTGGCAGGCATTGCGTGAGGCTGGCTTCACAGAGCAGC
GAATACTGTCCGCTTCCAACGGTGGAAGGATAACGGGCCGCCGCACTGCTGGCCCGCTTGGGTC
TCGCAGCCTACTCCAACGGAC

Sequences
Splice junction sequence	GCTTCACAGAGCAGCGAATACTGTCCGCTTCCAACGGTGGAAGGATAACGGGCCGCCGCACTGC TGGCCCGCTTGGGTCTCGCAGCCTACTCCAACGGACgcttgtaacccgagcgggggcattaagg tggtgtggacgttgccgtatggctgcgggcctgggttggcagtgccatagatggcccgcccgtt ccaagttg
Assembled circRNA sequence	Yes The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).
Full-length trsnacripts	Transcript length: 277 Transcript exons: 29382389-29382665 ACTTGTAACCCGAGCGGGGGCATTAAGGTGGTGTGGACGTTGCCGTATGGCTGCGGGCCTGGGT TGGCAGTGCCATAGATGGCCCGCCCGTTCCAAGTTGCGTAGTTGGGCCGGCGGGGCTTGAGCGA AAGCTCTGGCCTCACGTTTCCCTAGAGTGGCAGGCATTGCGTGAGGCTGGCTTCACAGAGCAGC GAATACTGTCCGCTTCCAACGGTGGAAGGATAACGGGCCGCCGCACTGCTGGCCCGCTTGGGTC TCGCAGCCTACTCCAACGGAC
Genomic sequence	GCTTGTAACCCGAGCGGGGGCATTAAGGTGGTGTGGACGTTGCCGTATGGCTGCGGGCCTGGGT TGGCAGTGCCATAGATGGCCCGCCCGTTCCAAGTTGCGTAGTTGGGCCGGCGGGGCTTGAGCGA AAGCTCTGGCCTCACGTTTCCCTAGAGTGGCAGGCATTGCGTGAGGCTGGCTTCACAGAGCAGC GAATACTGTCCGCTTCCAACGGTGGAAGGATAACGGGCCGCCGCACTGCTGGCCCGCTTGGGTC TCGCAGCCTACTCCAACGGAC

			
						 Conservation Information
					
						Conserved circRNAs
						
							osi_circ_013544 osi_circ_013545 osi_circ_013547 osi_circ_016459 
osi_circ_002886 						
					
						PMCS
						0.389190614

Conservation Information
Conserved circRNAs	osi_circ_013544 osi_circ_013545 osi_circ_013547 osi_circ_016459 osi_circ_002886
PMCS	0.389190614

			
						 Functional Information
					
						Coding potential
						N
					
						Potential coding position
						
							NA
						
						Potential amino acid sequence
						
							NA
						
						Sponge-miRNAs
						
							NA						
					
						circRNA-miRNA-mRNA network
						 VISUALIZATION
					
						Potential function description
						NA

Functional Information
Coding potential	N
Potential coding position	NA
Potential amino acid sequence	NA
Sponge-miRNAs	NA
circRNA-miRNA-mRNA network	VISUALIZATION
Potential function description	NA

			
						 Other Information
					
						References
						Ye et al., 2016

circRNA

Detail information of EPlOSAG00000010309_circ_g.32

Address

Any questions?

Supported by