Plant Circular RNA Database

Detail information of Os03g0719100_circ_g.3

			
						 General Information
					
						CircRNA Name
						Os03g0719100_circ_g.3
					
						ID in PlantcircBase
						osa_circ_021315
					
						Alias
						NA
					
						Organism
						
							Oryza sativa						
					
						Position
						
							chr3: 29128188-29132956  JBrowse»						
					
						Reference genome
						
							IRGSP-1.0.38						
					
						Type  
						
							e-circRNA							
									
						Identification method
						CIRCexplorer
					
						Parent gene
						
							Os03g0719100						
					
						Parent gene annotation
						
							SUMO (small ubiquitin-related modifier) E3-ligase, Abiotic stres
s response, Stress adaptation (Os03t0719100-01)
							
						Parent gene strand
						+
					
						Alternative splicing
						
							Os03g0719100_circ_g.1 Os03g0719100_circ_g.2 Os03g0719100_circ_g.4 Os03g0719100_circ_g.5 Os03g0719100_circ_g.6 Os03g0719100_circ_g.7 Os03g0719100_circ_g.8 Os03g0719100_circ_g.9 Os03g0719100_circ_g.10 						
					
						Support reads
						1
					
						Tissues
						root
					
						Exon boundary  
						
							Yes-Yes							"Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.

						Splicing signals  
						
							GT-AG							The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.

						Number of exons covered
						Os03t0719100-01:13

General Information
CircRNA Name	Os03g0719100_circ_g.3
ID in PlantcircBase	osa_circ_021315
Alias	NA
Organism	Oryza sativa
Position	chr3: 29128188-29132956 JBrowse»
Reference genome	IRGSP-1.0.38
Type	e-circRNA
Identification method	CIRCexplorer
Parent gene	Os03g0719100
Parent gene annotation	SUMO (small ubiquitin-related modifier) E3-ligase, Abiotic stres s response, Stress adaptation (Os03t0719100-01)
Parent gene strand	+
Alternative splicing	Os03g0719100_circ_g.1 Os03g0719100_circ_g.2 Os03g0719100_circ_g.4 Os03g0719100_circ_g.5 Os03g0719100_circ_g.6 Os03g0719100_circ_g.7 Os03g0719100_circ_g.8 Os03g0719100_circ_g.9 Os03g0719100_circ_g.10
Support reads	1
Tissues	root
Exon boundary	Yes-Yes "Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.
Splicing signals	GT-AG The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.
Number of exons covered	Os03t0719100-01:13

			
						 Experimental Information
					
						Sanger sequencing for BSS  
						
							NA							Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".

						PCR primers for BSS   
						
							NA							PCR primers used in back-splicing site (BSS) validation.

						Sanger sequencing for FL   
						
							NA							Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.

						PCR primers for FL   
						
							NA							 PCR primers used in full-length (FL) sequence validation.

Experimental Information
Sanger sequencing for BSS	NA Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".
PCR primers for BSS	NA PCR primers used in back-splicing site (BSS) validation.
Sanger sequencing for FL	NA Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.
PCR primers for FL	NA PCR primers used in full-length (FL) sequence validation.

			
				
						 Sequences
					

				
						Splice junction sequence  
						
							TGTTTCTTCTTGTTTGCAGTGGCAGTGCCCAATTTGCCTGAAAAACTACTCTTTGGACAACATA
ATCATTGATCCTTACTTCAACCGCATAACTGCTTTGtacaagttgaatcactttagaataaaag
agctaaaggatgtcctgcatcagcttggacttccaaagcaaggaaggaaacaggtttgttcact
gcatcttc

									
								

					

						Assembled circRNA sequence  
						
							NA
The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).

					

						Full-length trsnacripts
						
							NA						
					

						Genomic sequence
						
							TACAAGTTGAATCACTTTAGAATAAAAGAGCTAAAGGATGTCCTGCATCAGCTTGGACTTCCAA
AGCAAGGAAGGAAACAGGTTTGTTCACTGCATCTTCCTTCATCTTTTTCATTACACAATTACTT
TCTAGTCATCGCTTAATTAACACCAATGGCGCTAGTTACCATTCTTCCTTTTCCTTTTCTTAAC
TACGTAAAATCGCTCCCTCTCTTAAAAGAACTTCCTAAAAAAACTGGTCCACCCTTAAAAAGAC
ATCGTCTAAAAAAAAATCTGGTGATCCTGTAATCCCGTTACCATGTATGGACATGTAACTAGTA
TTGTGGGAAAATGTGAGATTCAGTTGGGTTTAATGGCCTCCATGGCAATAGCCCAGACATATTT
TGCAATTAAATTAACTTGTATGTGACTTCTAGTATTGCACATATGGGATTTGTTCACTTATGGA
CCATTTGGGTCTTGTGCTTTCGCTTCATTTACAGGAACTTGTGGACAAAATTATAGCAGTATTG
TCTGATCAACAAGAACAAGGTACATTACACTGTTGCTTTTGAAATTTTGATATTTTTTACTGGT
GTCGACTACTAAAAGGTCATGATTTCATTTTGTTCTTGCAGACTCCAGATTGAATGGCTTGCCA
AACAAAAAGATGGTTGGGAAAGAAACTGTGGCTAAAATAGTTGATGACACTTTTGCGTGAGCTT
ACTTTCTTTATATACCTTTTTCAATGATCCAATTAGCTATTTACAAGGCATTATAAACTTTGTG
TACTGCTTCCAGAAAAATGAATGGCTCCACAAATGCTGTTCCAGCCTCTAGAAATCAGACTGAC
TCGGGGCACATTGTAAAGCCTAAAAGGAAGTCAGATGATTCTGCTCAGTTGGATGTCAAAGTCC
GTTGTCCCTGTGGTTATTCCATGGCCAATGATTCCATGATTAAGGTACTGTTCAGAAATTCATA
TTACAGTTACAAGTATAATCATGCAATATCTAATTGTCCTCCACCAGCCAATCCAACAGAACCT
GTAAAATTTCTTCTAAACCTTGTACTGATCATGCTGAATTATTTGGGTTACTATTCATTTATGA
TTTATCCATCATGAGTCTTATGTGCTGAAACTTGAATACAGCTAATTGTTTTGGGTTACACATT
TATTCATCGTGAGTCTTATGTAAAACAGAAATGTTATACCAAATGTAGCACCTAAGTGTTGTGT
TATTTCATTATTTCAAAAATTGGTAGCATCTCGTAATCTTTTTCGTGACAGTTCCTGTTGCTTG
CTTCTGTTTAGTGTTATTATCCACAATTTGTTTGCCCCTTTTCAGTGTGAAGGTCCACAATGCA
ATACACAGCAACATGTAGGCTGCGTTATCATATCTGAGAAGCCTGCAGACAGTGTTCCTCCAGA
ATTACCACCACACTTTTATTGTGATATGTGCCGAATCACTCGAGCTGACCCGTAAGTTCTTCTA
TACTCTCTGATGTAGCAACTCATCCTTACTGAACCACCCAATTGTCCTGCGATCACATGCTTAA
TTTCTTCCTTGTGCCATAATGATGTGGTATATCAAGTTCTTCATGGTAGTTCAAGCTCAAACAT
CTTATTCTTTTAGTTCTGTGGCATTATTTATTTATTTATTTATAGAACTATTTTTTTTCTGAGC
AAAACCATTTTTTCTGTGAACTTTAAAACTCTATGATTTCTCTTTATTCCCGTTATGTGCGTTT
TCTTGTACGACATTGTTAGGCTGAGTACATAATTTACCAAATTCCTATTTGGTCTTGATATCAT
AGCATATTGTTCTAACATGATTTCCTTCTTTAACTTGCAGTTTCTGGGTTACTGTTAATCATCC
TGTACTTCCAGTCTCAATAACTCCCTGTAAAGTAGCATCTGATGGGTGAGTTATCTATTATTTT
GTCACCAAAGAACATTATTTAATGTTGGTTCCCAAAATGTTGGTATTGTCACATGTGGAATAGA
AGGGTCGATCTGGGGGCAAGTGGGCAGGATGGATCCTACATTGTTCTCCACTTCCTTTTTTCCC
CTCTTTTTTGTTTGTGATTCATGCTTATGTCCAGGTCATATGCTGTACAGTATTTCGAGAAGAC
CTTTCCGCTATCAAGAGCTAATTGGGAGATGCTTCAGAAAGATGAATATGACCTCCAGGTTAAC
TCCCTGTTCCAATGAACCATCATTAATTTTGTTCACGATGACCATTCCTAATCATTTTGAGCCA
TAACTTATTAAGATCTGTAAAATCGAACCTTTGCAAAGACATCTCAGTATAGAGTATAAACTAT
GGTTATTATGCTTTCTTATTGATTTTATGCTAGAGAATATTTGAGTTGTTTGACCAATATGTAT
CCAATTATGGCCTTGATTTTCTGTTGCATTCTTTATTTTCATGCAGGTTTGGTGTATCCTATTC
AATGATAGCGTACCTTTCAGGATGCAGTGGCCTTTACATTCTGATATTCAAATTAATGGTATAT
GCCTGAGTTTTCTGTGCAGCAATGCATATTCTATAACAGGGTTAATAGAAAACGGTTTATTCAG
TTAAAGAATCATGTCCTCAAACTCATTGCAAATGGTATATGCCTGAGCTTACTGTACGTAACAA
TGTATATTCTATAATAGGGTTCATAGAGAACGGTTTATTCAGTTAGAGAATCACGTCCTCAAAC
TCATTGCACTAGTTTTGTTTGTATAATCCATGCTAGACTAACAGAACAGTGTCGTGGAACATAC
ATTGTTTAATACGCTGCTTTGTTATCAGCAGTTCTTTTACAGCTTGTTGAATTTTTGGACGGTG
TGTTTTCTGCCTTGAACTTGGTTGAAGGGCCTCATAATCTCTTGGCTAATCAGTGTTTGCTGTT
AGGATGTCTTGAGCTTATGTTTTCTGTGGTACAATTGAGCCTATTTGCCCAAGCTAGGTGGATG
ATGGTGCCTGTTACTGCATTAAAAACCAAACTTCATCTTCAGCTCATATTTTGTTGCATTACCA
GTTGTTTTGCTCCTCGTTTTACTTTATTGTGGGTGATTTGTGCATGCACATCTTTTTGCATCTA
TGTTTTCATGCACTTGCATATTCCTTTATTTCGGCAATTTAGAAATGTAGCACCTTGCAAGTTT
ACATCCTTTTAGCTATATCTGATCTCTTGTCACTTCATACGTTATCTTAAACATGCCGTGATAA
ATGGTCATCTGTACCGAATAGTAGTTGAAATGTTCAATCATAAATCTGAACTGTTCATGTTGGC
AATTGGTTTTCTTTTCTTCAGGTATTCCTATTAGGGTTGTCAACAGGCAACCCACACAACAGTT
AGGGGTGAATGGTAGAGACGATGGTCCAGTTGTAAGCATCTTATTCTCATAAAGCATGCTATTC
TCTTATTCAATTATTCATCTGAGATATTATATACATCATCTCTGTCAACTACTAGCTATTCTGT
TTGGATATTTAATCCTCCCTGCCCATTTTTCTGTATCCAGTTAACAGCATATGTGAGAGAAGGG
TCTAATAAGATTGTCCTATCTAGAAGTGACTCTCGCACATTCTGTTTGGGAGTCAGGATTGCCA
AGAGGAGATCTGTAGAACAGGTAACTGCTTCTTGTAAGTGCACAGCCATTGTTAATCAAAATAT
TATTCAGAAATACATTTTTAGCAGAAAAAGGTTGTTCTGGAATCTGGATCAGCATACAGTTGGG
ATATTTCTTGGTCATCTGATCTTGATACCTCCCTTTTTCACAACAAATGCTTGATGTGTTTTAG
CTCATTTCCTTCCTTTTTCTTTTTACCTCTGTATGCTTATCCATTCGTATATCTATTTTATGTG
ATGAAAAATTCCAAACAATACTTAAAACATATGTAGCTTGTTGGATATGGCCAGAACTCGGTCG
ATTCTCTCAGCATCTACAACACAAGCTGGTACCTGGGAGGAACATGGCAACTCTTGAGATTTAG
GAACCCTGTTTTATTTATCAAAGGTCCTCTAAATTTTCATAGCATACAGGTCCTATCTTTGGTG
CCAAAGGAACAAGATGGTGAGAACTTTGATAATGCCCTTGCTCGTGTGCGTCGCTGTGTTGGTG
GTGGAACCGAGGCAGATAATGCTGACAGTGACAGTGATATTGAAGTTGTAGCTGATTCTGTCTC
TGTGAATCTCCGATGCCCTGTAAGTACTGTGACTATTTCTGAGAATGCTTTAGGTCCTTAATGA
TATTCCTGTTCATTGGAGTGTTGGCGTATATGCAGTCTAAAGTTTTTCTATATATGTTGCACCC
CTGACACTATAGGTCTTAACTTTACTCTTGCTTGAATTATCATCTGTATGTGTTCATTATAATT
TTCAACCTGGATGTTTTTGTGATCCTATTTTACTAACCATATAATGTTTTATTCATAGTATGGC
TGACACTACTTCATGCAAAGTTAGCTATGAAGTACTCCTATGATATCTGTATAATGTCTCATGA
AAATGCCTTTTATCTTGACAGATGACTGGTTCAAGGATCAAGATAGCTGGCCGGTTCAAACCCT
GCGTTCACATGGGTTGTTTTGATTTAGAAGCTTTTGTGGAACTTAATCAACGTTCAAGAAAGGT
TTGATTATCTTTCTCACATCAGTTAGCATGTTTCTCTCTTTTTCCTTGTCTAACCAAACTATGT
TTCTTCTTGTTTGCAGTGGCAGTGCCCAATTTGCCTGAAAAACTACTCTTTGGACAACATAATC
ATTGATCCTTACTTCAACCGCATAACTGCTTTG
						
					

			
		

Sequences
Splice junction sequence	TGTTTCTTCTTGTTTGCAGTGGCAGTGCCCAATTTGCCTGAAAAACTACTCTTTGGACAACATA ATCATTGATCCTTACTTCAACCGCATAACTGCTTTGtacaagttgaatcactttagaataaaag agctaaaggatgtcctgcatcagcttggacttccaaagcaaggaaggaaacaggtttgttcact gcatcttc
Assembled circRNA sequence	NA The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).
Full-length trsnacripts	NA
Genomic sequence	TACAAGTTGAATCACTTTAGAATAAAAGAGCTAAAGGATGTCCTGCATCAGCTTGGACTTCCAA AGCAAGGAAGGAAACAGGTTTGTTCACTGCATCTTCCTTCATCTTTTTCATTACACAATTACTT TCTAGTCATCGCTTAATTAACACCAATGGCGCTAGTTACCATTCTTCCTTTTCCTTTTCTTAAC TACGTAAAATCGCTCCCTCTCTTAAAAGAACTTCCTAAAAAAACTGGTCCACCCTTAAAAAGAC ATCGTCTAAAAAAAAATCTGGTGATCCTGTAATCCCGTTACCATGTATGGACATGTAACTAGTA TTGTGGGAAAATGTGAGATTCAGTTGGGTTTAATGGCCTCCATGGCAATAGCCCAGACATATTT TGCAATTAAATTAACTTGTATGTGACTTCTAGTATTGCACATATGGGATTTGTTCACTTATGGA CCATTTGGGTCTTGTGCTTTCGCTTCATTTACAGGAACTTGTGGACAAAATTATAGCAGTATTG TCTGATCAACAAGAACAAGGTACATTACACTGTTGCTTTTGAAATTTTGATATTTTTTACTGGT GTCGACTACTAAAAGGTCATGATTTCATTTTGTTCTTGCAGACTCCAGATTGAATGGCTTGCCA AACAAAAAGATGGTTGGGAAAGAAACTGTGGCTAAAATAGTTGATGACACTTTTGCGTGAGCTT ACTTTCTTTATATACCTTTTTCAATGATCCAATTAGCTATTTACAAGGCATTATAAACTTTGTG TACTGCTTCCAGAAAAATGAATGGCTCCACAAATGCTGTTCCAGCCTCTAGAAATCAGACTGAC TCGGGGCACATTGTAAAGCCTAAAAGGAAGTCAGATGATTCTGCTCAGTTGGATGTCAAAGTCC GTTGTCCCTGTGGTTATTCCATGGCCAATGATTCCATGATTAAGGTACTGTTCAGAAATTCATA TTACAGTTACAAGTATAATCATGCAATATCTAATTGTCCTCCACCAGCCAATCCAACAGAACCT GTAAAATTTCTTCTAAACCTTGTACTGATCATGCTGAATTATTTGGGTTACTATTCATTTATGA TTTATCCATCATGAGTCTTATGTGCTGAAACTTGAATACAGCTAATTGTTTTGGGTTACACATT TATTCATCGTGAGTCTTATGTAAAACAGAAATGTTATACCAAATGTAGCACCTAAGTGTTGTGT TATTTCATTATTTCAAAAATTGGTAGCATCTCGTAATCTTTTTCGTGACAGTTCCTGTTGCTTG CTTCTGTTTAGTGTTATTATCCACAATTTGTTTGCCCCTTTTCAGTGTGAAGGTCCACAATGCA ATACACAGCAACATGTAGGCTGCGTTATCATATCTGAGAAGCCTGCAGACAGTGTTCCTCCAGA ATTACCACCACACTTTTATTGTGATATGTGCCGAATCACTCGAGCTGACCCGTAAGTTCTTCTA TACTCTCTGATGTAGCAACTCATCCTTACTGAACCACCCAATTGTCCTGCGATCACATGCTTAA TTTCTTCCTTGTGCCATAATGATGTGGTATATCAAGTTCTTCATGGTAGTTCAAGCTCAAACAT CTTATTCTTTTAGTTCTGTGGCATTATTTATTTATTTATTTATAGAACTATTTTTTTTCTGAGC AAAACCATTTTTTCTGTGAACTTTAAAACTCTATGATTTCTCTTTATTCCCGTTATGTGCGTTT TCTTGTACGACATTGTTAGGCTGAGTACATAATTTACCAAATTCCTATTTGGTCTTGATATCAT AGCATATTGTTCTAACATGATTTCCTTCTTTAACTTGCAGTTTCTGGGTTACTGTTAATCATCC TGTACTTCCAGTCTCAATAACTCCCTGTAAAGTAGCATCTGATGGGTGAGTTATCTATTATTTT GTCACCAAAGAACATTATTTAATGTTGGTTCCCAAAATGTTGGTATTGTCACATGTGGAATAGA AGGGTCGATCTGGGGGCAAGTGGGCAGGATGGATCCTACATTGTTCTCCACTTCCTTTTTTCCC CTCTTTTTTGTTTGTGATTCATGCTTATGTCCAGGTCATATGCTGTACAGTATTTCGAGAAGAC CTTTCCGCTATCAAGAGCTAATTGGGAGATGCTTCAGAAAGATGAATATGACCTCCAGGTTAAC TCCCTGTTCCAATGAACCATCATTAATTTTGTTCACGATGACCATTCCTAATCATTTTGAGCCA TAACTTATTAAGATCTGTAAAATCGAACCTTTGCAAAGACATCTCAGTATAGAGTATAAACTAT GGTTATTATGCTTTCTTATTGATTTTATGCTAGAGAATATTTGAGTTGTTTGACCAATATGTAT CCAATTATGGCCTTGATTTTCTGTTGCATTCTTTATTTTCATGCAGGTTTGGTGTATCCTATTC AATGATAGCGTACCTTTCAGGATGCAGTGGCCTTTACATTCTGATATTCAAATTAATGGTATAT GCCTGAGTTTTCTGTGCAGCAATGCATATTCTATAACAGGGTTAATAGAAAACGGTTTATTCAG TTAAAGAATCATGTCCTCAAACTCATTGCAAATGGTATATGCCTGAGCTTACTGTACGTAACAA TGTATATTCTATAATAGGGTTCATAGAGAACGGTTTATTCAGTTAGAGAATCACGTCCTCAAAC TCATTGCACTAGTTTTGTTTGTATAATCCATGCTAGACTAACAGAACAGTGTCGTGGAACATAC ATTGTTTAATACGCTGCTTTGTTATCAGCAGTTCTTTTACAGCTTGTTGAATTTTTGGACGGTG TGTTTTCTGCCTTGAACTTGGTTGAAGGGCCTCATAATCTCTTGGCTAATCAGTGTTTGCTGTT AGGATGTCTTGAGCTTATGTTTTCTGTGGTACAATTGAGCCTATTTGCCCAAGCTAGGTGGATG ATGGTGCCTGTTACTGCATTAAAAACCAAACTTCATCTTCAGCTCATATTTTGTTGCATTACCA GTTGTTTTGCTCCTCGTTTTACTTTATTGTGGGTGATTTGTGCATGCACATCTTTTTGCATCTA TGTTTTCATGCACTTGCATATTCCTTTATTTCGGCAATTTAGAAATGTAGCACCTTGCAAGTTT ACATCCTTTTAGCTATATCTGATCTCTTGTCACTTCATACGTTATCTTAAACATGCCGTGATAA ATGGTCATCTGTACCGAATAGTAGTTGAAATGTTCAATCATAAATCTGAACTGTTCATGTTGGC AATTGGTTTTCTTTTCTTCAGGTATTCCTATTAGGGTTGTCAACAGGCAACCCACACAACAGTT AGGGGTGAATGGTAGAGACGATGGTCCAGTTGTAAGCATCTTATTCTCATAAAGCATGCTATTC TCTTATTCAATTATTCATCTGAGATATTATATACATCATCTCTGTCAACTACTAGCTATTCTGT TTGGATATTTAATCCTCCCTGCCCATTTTTCTGTATCCAGTTAACAGCATATGTGAGAGAAGGG TCTAATAAGATTGTCCTATCTAGAAGTGACTCTCGCACATTCTGTTTGGGAGTCAGGATTGCCA AGAGGAGATCTGTAGAACAGGTAACTGCTTCTTGTAAGTGCACAGCCATTGTTAATCAAAATAT TATTCAGAAATACATTTTTAGCAGAAAAAGGTTGTTCTGGAATCTGGATCAGCATACAGTTGGG ATATTTCTTGGTCATCTGATCTTGATACCTCCCTTTTTCACAACAAATGCTTGATGTGTTTTAG CTCATTTCCTTCCTTTTTCTTTTTACCTCTGTATGCTTATCCATTCGTATATCTATTTTATGTG ATGAAAAATTCCAAACAATACTTAAAACATATGTAGCTTGTTGGATATGGCCAGAACTCGGTCG ATTCTCTCAGCATCTACAACACAAGCTGGTACCTGGGAGGAACATGGCAACTCTTGAGATTTAG GAACCCTGTTTTATTTATCAAAGGTCCTCTAAATTTTCATAGCATACAGGTCCTATCTTTGGTG CCAAAGGAACAAGATGGTGAGAACTTTGATAATGCCCTTGCTCGTGTGCGTCGCTGTGTTGGTG GTGGAACCGAGGCAGATAATGCTGACAGTGACAGTGATATTGAAGTTGTAGCTGATTCTGTCTC TGTGAATCTCCGATGCCCTGTAAGTACTGTGACTATTTCTGAGAATGCTTTAGGTCCTTAATGA TATTCCTGTTCATTGGAGTGTTGGCGTATATGCAGTCTAAAGTTTTTCTATATATGTTGCACCC CTGACACTATAGGTCTTAACTTTACTCTTGCTTGAATTATCATCTGTATGTGTTCATTATAATT TTCAACCTGGATGTTTTTGTGATCCTATTTTACTAACCATATAATGTTTTATTCATAGTATGGC TGACACTACTTCATGCAAAGTTAGCTATGAAGTACTCCTATGATATCTGTATAATGTCTCATGA AAATGCCTTTTATCTTGACAGATGACTGGTTCAAGGATCAAGATAGCTGGCCGGTTCAAACCCT GCGTTCACATGGGTTGTTTTGATTTAGAAGCTTTTGTGGAACTTAATCAACGTTCAAGAAAGGT TTGATTATCTTTCTCACATCAGTTAGCATGTTTCTCTCTTTTTCCTTGTCTAACCAAACTATGT TTCTTCTTGTTTGCAGTGGCAGTGCCCAATTTGCCTGAAAAACTACTCTTTGGACAACATAATC ATTGATCCTTACTTCAACCGCATAACTGCTTTG

			
						 Conservation Information
					
						Conserved circRNAs
						
							NA						
					
						PMCS
						0.105466211

Conservation Information
Conserved circRNAs	NA
PMCS	0.105466211

			
				
						 Functional Information
					

				
						Coding potential
						Y
					

						Potential coding position
						
							29128838-29132953(+)
						
					

						Potential amino acid sequence
						
							MVGKETVAKIVDDTFAKMNGSTNAVPASRNQTDSGHIVKPKRKSDDSAQLDVKVRCPCGYSMAN
DSMIKCEGPQCNTQQHVGCVIISEKPADSVPPELPPHFYCDMCRITRADPFWVTVNHPVLPVSI
TPCKVASDGSYAVQYFEKTFPLSRANWEMLQKDEYDLQVWCILFNDSVPFRMQWPLHSDIQING
IPIRVVNRQPTQQLGVNGRDDGPVLTAYVREGSNKIVLSRSDSRTFCLGVRIAKRRSVEQVLSL
VPKEQDGENFDNALARVRRCVGGGTEADNADSDSDIEVVADSVSVNLRCPMTGSRIKIAGRFKP
CVHMGCFDLEAFVELNQRSRKWQCPICLKNYSLDNIIIDPYFNRITALYKLNHFRIKELKDVLH
QLGLPKQGRKQELVDKIIAVLSDQQEQDSRLNGLPNKKMVGKETVAKIVDDTFAKMNGSTNAVP
ASRNQTDSGHIVKPKRKSDDSAQLDVKVRCPCGYSMANDSMIKCEGPQCNTQQHVGCVIISEKP
ADSVPPELPPHFYCDMCRITRADPFWVTVNHPVLPVSITPCKVASDGSYAVQYFEKTFPLSRAN
WEMLQKDEYDLQVWCILFNDSVPFRMQWPLHSDIQINGIPIRVVNRQPTQQLGVNGRDDGPVLT
AYVREGSNKIVLSRSDSRTFCLGVRIAKRRSVEQVLSLVPKEQDGENFDNALARVRRCVGGGTE
ADNADSDSDIEVVADSVSVNLRCPMTGSRIKIAGRFKPCVHMGCFDLEAFVELNQRSRKWQCPI
CLKNYSLDNIIIDPYFNRITALYKLNHFRIKELKDVLHQLGLPKQGRKQELVDKIIAVLSDQQE
QDSRLNGLPNKKMVGKETVAKIVDDTFAKMNGSTNAVPASRNQTDSGHIVKPKRKSDDSAQLDV
KVRCPCGYSMANDSMIKCEGPQCNTQQHVGCVIISEKPADSVPPELPPHFYCDMCRITRADPFW
VTVNHPVLPVSITPCKVASDGSYAVQYFEKTFPLSRANWEMLQKDEYDLQVWCILFNDSVPFRM
QWPLHSDIQINGIPIRVVNRQPTQQLGVNGRDDGPVLTAYVREGSNKIVLSRSDSRTFCLGVRI
AKRRSVEQVLSLVPKEQDGENFDNALARVRRCVGGGTEADNADSDSDIEVVADSVSVNLRCPMT
GSRIKIAGRFKPCVHMGCFDLEAFVELNQRSRKWQCPICLKNYSLDNIIIDPYFNRITALYKLN
HFRIKELKDVLHQLGLPKQGRKQELVDKIIAVLSDQQEQDSRLNGLPNKKMVGKETVAKIVDDT
FAKMNGSTNAVPASRNQTDSGHIVKPKRKSDDSAQLDVKVRCPCGYSMANDSMIKCEGPQCNTQ
QHVGCVIISEKPADSVPPELPPHFYCDMCRITRADPFWVTVNHPVLPVSITPCKVASDGSYAVQ
YFEKTFPLSRANWEMLQKDEYDLQVWCILFNDSVPFRMQWPLHSDIQINGIPIRVVNRQPTQQL
GVNGRDDGPVLTAYVREGSNKIVLSRSDSRTFCLGVRIAKRRSVEQVLSLVPKEQDGENFDNAL
ARVRRCVGGGTEADNADSDSDIEVVADSVSVNLRCPMTGSRIKIAGRFKPCVHMGCFDLEAFVE
LNQRSRKWQCPICLKNYSLDNIIIDPYFNRITAL(+)
						
					

						Sponge-miRNAs
						
							NA						
					

						circRNA-miRNA-mRNA network
						 VISUALIZATION
					

						Potential function description
						NA
					

			
		

Functional Information
Coding potential	Y
Potential coding position	29128838-29132953(+)
Potential amino acid sequence	MVGKETVAKIVDDTFAKMNGSTNAVPASRNQTDSGHIVKPKRKSDDSAQLDVKVRCPCGYSMAN DSMIKCEGPQCNTQQHVGCVIISEKPADSVPPELPPHFYCDMCRITRADPFWVTVNHPVLPVSI TPCKVASDGSYAVQYFEKTFPLSRANWEMLQKDEYDLQVWCILFNDSVPFRMQWPLHSDIQING IPIRVVNRQPTQQLGVNGRDDGPVLTAYVREGSNKIVLSRSDSRTFCLGVRIAKRRSVEQVLSL VPKEQDGENFDNALARVRRCVGGGTEADNADSDSDIEVVADSVSVNLRCPMTGSRIKIAGRFKP CVHMGCFDLEAFVELNQRSRKWQCPICLKNYSLDNIIIDPYFNRITALYKLNHFRIKELKDVLH QLGLPKQGRKQELVDKIIAVLSDQQEQDSRLNGLPNKKMVGKETVAKIVDDTFAKMNGSTNAVP ASRNQTDSGHIVKPKRKSDDSAQLDVKVRCPCGYSMANDSMIKCEGPQCNTQQHVGCVIISEKP ADSVPPELPPHFYCDMCRITRADPFWVTVNHPVLPVSITPCKVASDGSYAVQYFEKTFPLSRAN WEMLQKDEYDLQVWCILFNDSVPFRMQWPLHSDIQINGIPIRVVNRQPTQQLGVNGRDDGPVLT AYVREGSNKIVLSRSDSRTFCLGVRIAKRRSVEQVLSLVPKEQDGENFDNALARVRRCVGGGTE ADNADSDSDIEVVADSVSVNLRCPMTGSRIKIAGRFKPCVHMGCFDLEAFVELNQRSRKWQCPI CLKNYSLDNIIIDPYFNRITALYKLNHFRIKELKDVLHQLGLPKQGRKQELVDKIIAVLSDQQE QDSRLNGLPNKKMVGKETVAKIVDDTFAKMNGSTNAVPASRNQTDSGHIVKPKRKSDDSAQLDV KVRCPCGYSMANDSMIKCEGPQCNTQQHVGCVIISEKPADSVPPELPPHFYCDMCRITRADPFW VTVNHPVLPVSITPCKVASDGSYAVQYFEKTFPLSRANWEMLQKDEYDLQVWCILFNDSVPFRM QWPLHSDIQINGIPIRVVNRQPTQQLGVNGRDDGPVLTAYVREGSNKIVLSRSDSRTFCLGVRI AKRRSVEQVLSLVPKEQDGENFDNALARVRRCVGGGTEADNADSDSDIEVVADSVSVNLRCPMT GSRIKIAGRFKPCVHMGCFDLEAFVELNQRSRKWQCPICLKNYSLDNIIIDPYFNRITALYKLN HFRIKELKDVLHQLGLPKQGRKQELVDKIIAVLSDQQEQDSRLNGLPNKKMVGKETVAKIVDDT FAKMNGSTNAVPASRNQTDSGHIVKPKRKSDDSAQLDVKVRCPCGYSMANDSMIKCEGPQCNTQ QHVGCVIISEKPADSVPPELPPHFYCDMCRITRADPFWVTVNHPVLPVSITPCKVASDGSYAVQ YFEKTFPLSRANWEMLQKDEYDLQVWCILFNDSVPFRMQWPLHSDIQINGIPIRVVNRQPTQQL GVNGRDDGPVLTAYVREGSNKIVLSRSDSRTFCLGVRIAKRRSVEQVLSLVPKEQDGENFDNAL ARVRRCVGGGTEADNADSDSDIEVVADSVSVNLRCPMTGSRIKIAGRFKPCVHMGCFDLEAFVE LNQRSRKWQCPICLKNYSLDNIIIDPYFNRITAL(+)
Sponge-miRNAs	NA
circRNA-miRNA-mRNA network	VISUALIZATION
Potential function description	NA

			
						 Other Information
					
						References
						Chu et al., 2017

circRNA

Detail information of Os03g0719100_circ_g.3

Address

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